EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011946 (Gene tree)
Gene ID: 108232711
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 11889 bases
Position: chrLWHD01000017.1:2084067-2095955
Accession: 108232711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016008	RTC	PF01137.21	1.3e-57	1	1
ENSKMAP00000016008	RTC_insert	PF05189.13	1.5e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016238	-	4211	XM_017410682	ENSKMAP00000016008	372 (aa)	XP_017266171	UPI0007F8F8AB

Gene Model

Click here to download ENSKMAG00000011946's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011946	rcl1	99	78.202	ENSG00000120158	RCL1	100	79.630	Homo_sapiens
ENSKMAG00000011946	rcl1	100	91.129	ENSAPOG00000015666	rcl1	100	91.129	Acanthochromis_polyacanthus
ENSKMAG00000011946	rcl1	99	79.292	ENSAMEG00000002631	RCL1	98	79.292	Ailuropoda_melanoleuca
ENSKMAG00000011946	rcl1	100	90.323	ENSACIG00000021195	rcl1	100	90.323	Amphilophus_citrinellus
ENSKMAG00000011946	rcl1	100	90.591	ENSAOCG00000002223	rcl1	100	90.591	Amphiprion_ocellaris
ENSKMAG00000011946	rcl1	100	91.129	ENSAPEG00000006905	rcl1	100	91.129	Amphiprion_percula
ENSKMAG00000011946	rcl1	100	90.323	ENSATEG00000020026	rcl1	100	90.323	Anabas_testudineus
ENSKMAG00000011946	rcl1	88	74.772	ENSAPLG00000006031	RCL1	100	74.772	Anas_platyrhynchos
ENSKMAG00000011946	rcl1	99	73.784	ENSACAG00000003640	RCL1	99	73.784	Anolis_carolinensis
ENSKMAG00000011946	rcl1	99	77.657	ENSANAG00000037372	RCL1	98	77.657	Aotus_nancymaae
ENSKMAG00000011946	rcl1	100	89.247	ENSACLG00000021724	rcl1	100	89.247	Astatotilapia_calliptera
ENSKMAG00000011946	rcl1	99	81.030	ENSAMXG00000033394	rcl1	99	81.030	Astyanax_mexicanus
ENSKMAG00000011946	rcl1	99	45.238	WBGene00022852	ZK1127.5	99	45.238	Caenorhabditis_elegans
ENSKMAG00000011946	rcl1	99	77.929	ENSCJAG00000011202	RCL1	98	77.929	Callithrix_jacchus
ENSKMAG00000011946	rcl1	99	79.292	ENSCAFG00000002091	RCL1	98	79.292	Canis_familiaris
ENSKMAG00000011946	rcl1	99	79.292	ENSCAFG00020000638	RCL1	77	79.292	Canis_lupus_dingo
ENSKMAG00000011946	rcl1	99	77.929	ENSCHIG00000012407	RCL1	98	77.929	Capra_hircus
ENSKMAG00000011946	rcl1	88	79.573	ENSTSYG00000009592	RCL1	97	79.670	Carlito_syrichta
ENSKMAG00000011946	rcl1	70	66.102	ENSCAPG00000013575	RCL1	100	66.102	Cavia_aperea
ENSKMAG00000011946	rcl1	99	78.202	ENSCPOG00000015354	RCL1	98	78.202	Cavia_porcellus
ENSKMAG00000011946	rcl1	99	77.929	ENSCCAG00000033505	RCL1	98	77.929	Cebus_capucinus
ENSKMAG00000011946	rcl1	99	77.568	ENSCATG00000034721	RCL1	99	77.568	Cercocebus_atys
ENSKMAG00000011946	rcl1	99	78.202	ENSCLAG00000007445	RCL1	98	78.202	Chinchilla_lanigera
ENSKMAG00000011946	rcl1	99	77.568	ENSCSAG00000008811	RCL1	99	77.568	Chlorocebus_sabaeus
ENSKMAG00000011946	rcl1	85	69.304	ENSCHOG00000007216	RCL1	98	69.304	Choloepus_hoffmanni
ENSKMAG00000011946	rcl1	99	75.749	ENSCPBG00000025481	RCL1	94	76.061	Chrysemys_picta_bellii
ENSKMAG00000011946	rcl1	99	59.189	ENSCING00000019565	-	98	59.189	Ciona_intestinalis
ENSKMAG00000011946	rcl1	99	77.568	ENSCANG00000027099	RCL1	99	77.568	Colobus_angolensis_palliatus
ENSKMAG00000011946	rcl1	99	79.019	ENSCGRG00001013748	Rcl1	98	79.019	Cricetulus_griseus_chok1gshd
ENSKMAG00000011946	rcl1	88	79.635	ENSCGRG00000005843	Rcl1	99	79.635	Cricetulus_griseus_crigri
ENSKMAG00000011946	rcl1	100	87.097	ENSCSEG00000000712	rcl1	98	87.097	Cynoglossus_semilaevis
ENSKMAG00000011946	rcl1	100	91.935	ENSCVAG00000011536	rcl1	100	91.935	Cyprinodon_variegatus
ENSKMAG00000011946	rcl1	99	79.564	ENSDARG00000038312	rcl1	100	79.564	Danio_rerio
ENSKMAG00000011946	rcl1	72	78.195	ENSDNOG00000019911	RCL1	100	79.630	Dasypus_novemcinctus
ENSKMAG00000011946	rcl1	99	79.019	ENSDORG00000015645	Rcl1	98	79.019	Dipodomys_ordii
ENSKMAG00000011946	rcl1	98	53.351	FBgn0020909	Rtc1	97	54.155	Drosophila_melanogaster
ENSKMAG00000011946	rcl1	88	55.183	ENSETEG00000014087	-	100	55.183	Echinops_telfairi
ENSKMAG00000011946	rcl1	99	56.640	ENSEBUG00000016621	-	98	56.640	Eptatretus_burgeri
ENSKMAG00000011946	rcl1	99	77.657	ENSEASG00005010653	RCL1	98	77.657	Equus_asinus_asinus
ENSKMAG00000011946	rcl1	99	77.657	ENSECAG00000015973	RCL1	98	77.657	Equus_caballus
ENSKMAG00000011946	rcl1	99	66.757	ENSEEUG00000009801	RCL1	98	66.757	Erinaceus_europaeus
ENSKMAG00000011946	rcl1	100	80.376	ENSELUG00000007353	rcl1	100	80.376	Esox_lucius
ENSKMAG00000011946	rcl1	99	78.108	ENSFCAG00000014557	RCL1	99	78.108	Felis_catus
ENSKMAG00000011946	rcl1	99	69.811	ENSFALG00000010553	RCL1	97	69.811	Ficedula_albicollis
ENSKMAG00000011946	rcl1	88	76.829	ENSFDAG00000004209	RCL1	100	76.829	Fukomys_damarensis
ENSKMAG00000011946	rcl1	100	92.473	ENSFHEG00000011228	rcl1	100	92.473	Fundulus_heteroclitus
ENSKMAG00000011946	rcl1	100	80.914	ENSGMOG00000004677	rcl1	100	80.914	Gadus_morhua
ENSKMAG00000011946	rcl1	100	73.867	ENSGALG00000015024	RCL1	100	73.867	Gallus_gallus
ENSKMAG00000011946	rcl1	100	93.011	ENSGAFG00000007257	rcl1	100	93.011	Gambusia_affinis
ENSKMAG00000011946	rcl1	100	90.323	ENSGACG00000017474	rcl1	100	90.323	Gasterosteus_aculeatus
ENSKMAG00000011946	rcl1	99	75.749	ENSGAGG00000003689	RCL1	98	75.749	Gopherus_agassizii
ENSKMAG00000011946	rcl1	99	77.657	ENSGGOG00000015041	RCL1	98	77.657	Gorilla_gorilla
ENSKMAG00000011946	rcl1	100	89.516	ENSHBUG00000001393	rcl1	100	89.516	Haplochromis_burtoni
ENSKMAG00000011946	rcl1	99	77.657	ENSHGLG00000016452	RCL1	98	77.657	Heterocephalus_glaber_female
ENSKMAG00000011946	rcl1	99	64.305	ENSHGLG00000005368	-	98	64.305	Heterocephalus_glaber_female
ENSKMAG00000011946	rcl1	99	64.850	ENSHGLG00100018010	-	98	64.850	Heterocephalus_glaber_male
ENSKMAG00000011946	rcl1	99	72.752	ENSHGLG00100008718	-	98	72.752	Heterocephalus_glaber_male
ENSKMAG00000011946	rcl1	100	89.516	ENSHCOG00000020170	rcl1	100	89.516	Hippocampus_comes
ENSKMAG00000011946	rcl1	99	82.289	ENSIPUG00000018054	RCL1	99	82.289	Ictalurus_punctatus
ENSKMAG00000011946	rcl1	99	77.112	ENSSTOG00000000023	RCL1	98	77.112	Ictidomys_tridecemlineatus
ENSKMAG00000011946	rcl1	99	69.210	ENSJJAG00000015632	-	98	69.210	Jaculus_jaculus
ENSKMAG00000011946	rcl1	99	78.747	ENSJJAG00000022803	-	98	78.747	Jaculus_jaculus
ENSKMAG00000011946	rcl1	54	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSKMAG00000011946	rcl1	100	85.484	ENSLBEG00000003957	rcl1	100	85.484	Labrus_bergylta
ENSKMAG00000011946	rcl1	92	75.439	ENSLACG00000004594	RCL1	100	79.503	Latimeria_chalumnae
ENSKMAG00000011946	rcl1	100	80.108	ENSLOCG00000010148	rcl1	98	80.108	Lepisosteus_oculatus
ENSKMAG00000011946	rcl1	99	76.567	ENSLAFG00000017495	RCL1	98	76.567	Loxodonta_africana
ENSKMAG00000011946	rcl1	99	77.568	ENSMFAG00000037906	RCL1	99	77.568	Macaca_fascicularis
ENSKMAG00000011946	rcl1	99	77.568	ENSMNEG00000012288	RCL1	99	77.568	Macaca_nemestrina
ENSKMAG00000011946	rcl1	99	77.568	ENSMLEG00000043088	RCL1	99	77.568	Mandrillus_leucophaeus
ENSKMAG00000011946	rcl1	100	92.204	ENSMAMG00000008311	rcl1	100	92.204	Mastacembelus_armatus
ENSKMAG00000011946	rcl1	100	89.247	ENSMZEG00005017292	rcl1	100	89.247	Maylandia_zebra
ENSKMAG00000011946	rcl1	58	72.727	ENSMGAG00000002245	RCL1	100	72.727	Meleagris_gallopavo
ENSKMAG00000011946	rcl1	58	80.556	ENSMAUG00000008922	Rcl1	100	80.556	Mesocricetus_auratus
ENSKMAG00000011946	rcl1	99	78.474	ENSMICG00000015562	RCL1	98	78.474	Microcebus_murinus
ENSKMAG00000011946	rcl1	99	78.747	ENSMOCG00000012145	Rcl1	98	78.747	Microtus_ochrogaster
ENSKMAG00000011946	rcl1	100	86.863	ENSMMOG00000021264	rcl1	100	86.863	Mola_mola
ENSKMAG00000011946	rcl1	94	77.937	ENSMODG00000015377	RCL1	93	77.937	Monodelphis_domestica
ENSKMAG00000011946	rcl1	100	91.667	ENSMALG00000018618	rcl1	100	91.667	Monopterus_albus
ENSKMAG00000011946	rcl1	99	79.019	MGP_CAROLIEiJ_G0022853	Rcl1	98	79.019	Mus_caroli
ENSKMAG00000011946	rcl1	99	78.474	ENSMUSG00000024785	Rcl1	98	78.474	Mus_musculus
ENSKMAG00000011946	rcl1	99	79.019	MGP_PahariEiJ_G0014346	Rcl1	100	78.947	Mus_pahari
ENSKMAG00000011946	rcl1	99	78.474	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSKMAG00000011946	rcl1	99	78.474	ENSMPUG00000004998	RCL1	98	78.474	Mustela_putorius_furo
ENSKMAG00000011946	rcl1	99	76.839	ENSMLUG00000009654	RCL1	98	76.839	Myotis_lucifugus
ENSKMAG00000011946	rcl1	99	78.202	ENSNGAG00000015327	Rcl1	98	78.202	Nannospalax_galili
ENSKMAG00000011946	rcl1	92	87.172	ENSNBRG00000019854	rcl1	99	83.196	Neolamprologus_brichardi
ENSKMAG00000011946	rcl1	99	75.749	ENSNLEG00000008891	RCL1	98	75.749	Nomascus_leucogenys
ENSKMAG00000011946	rcl1	99	71.390	ENSMEUG00000007653	RCL1	98	71.390	Notamacropus_eugenii
ENSKMAG00000011946	rcl1	99	76.839	ENSOPRG00000010965	RCL1	98	76.839	Ochotona_princeps
ENSKMAG00000011946	rcl1	88	65.046	ENSODEG00000004151	RCL1	96	65.046	Octodon_degus
ENSKMAG00000011946	rcl1	100	90.591	ENSONIG00000003871	rcl1	100	90.591	Oreochromis_niloticus
ENSKMAG00000011946	rcl1	66	75.502	ENSOANG00000013193	-	98	75.502	Ornithorhynchus_anatinus
ENSKMAG00000011946	rcl1	99	78.202	ENSOCUG00000008161	RCL1	98	78.202	Oryctolagus_cuniculus
ENSKMAG00000011946	rcl1	100	88.978	ENSORLG00000010443	rcl1	100	88.978	Oryzias_latipes
ENSKMAG00000011946	rcl1	100	89.247	ENSORLG00020012211	rcl1	100	89.247	Oryzias_latipes_hni
ENSKMAG00000011946	rcl1	100	88.710	ENSORLG00015001122	rcl1	100	88.710	Oryzias_latipes_hsok
ENSKMAG00000011946	rcl1	100	91.667	ENSOMEG00000022976	rcl1	88	91.667	Oryzias_melastigma
ENSKMAG00000011946	rcl1	99	77.929	ENSOGAG00000007480	RCL1	98	77.929	Otolemur_garnettii
ENSKMAG00000011946	rcl1	99	77.929	ENSOARG00000013463	RCL1	98	77.929	Ovis_aries
ENSKMAG00000011946	rcl1	99	77.929	ENSPPAG00000037958	RCL1	98	77.929	Pan_paniscus
ENSKMAG00000011946	rcl1	99	77.297	ENSPPRG00000022645	RCL1	99	77.297	Panthera_pardus
ENSKMAG00000011946	rcl1	88	78.899	ENSPTIG00000019031	RCL1	100	79.630	Panthera_tigris_altaica
ENSKMAG00000011946	rcl1	99	77.657	ENSPTRG00000020743	RCL1	98	77.657	Pan_troglodytes
ENSKMAG00000011946	rcl1	99	77.568	ENSPANG00000025151	RCL1	99	77.568	Papio_anubis
ENSKMAG00000011946	rcl1	100	79.839	ENSPKIG00000021022	rcl1	100	79.839	Paramormyrops_kingsleyae
ENSKMAG00000011946	rcl1	88	75.988	ENSPSIG00000012302	RCL1	100	75.988	Pelodiscus_sinensis
ENSKMAG00000011946	rcl1	100	88.441	ENSPMGG00000024007	rcl1	100	88.441	Periophthalmus_magnuspinnatus
ENSKMAG00000011946	rcl1	99	79.019	ENSPEMG00000023275	Rcl1	98	79.019	Peromyscus_maniculatus_bairdii
ENSKMAG00000011946	rcl1	99	77.929	ENSPCIG00000000188	RCL1	98	77.929	Phascolarctos_cinereus
ENSKMAG00000011946	rcl1	100	93.011	ENSPFOG00000019682	rcl1	99	93.011	Poecilia_formosa
ENSKMAG00000011946	rcl1	100	93.011	ENSPLAG00000022354	rcl1	100	93.011	Poecilia_latipinna
ENSKMAG00000011946	rcl1	100	93.011	ENSPMEG00000008131	rcl1	100	93.011	Poecilia_mexicana
ENSKMAG00000011946	rcl1	100	92.742	ENSPREG00000008032	rcl1	100	92.742	Poecilia_reticulata
ENSKMAG00000011946	rcl1	99	78.474	ENSPPYG00000019244	RCL1	98	78.474	Pongo_abelii
ENSKMAG00000011946	rcl1	99	70.811	ENSPCAG00000001440	RCL1	99	70.811	Procavia_capensis
ENSKMAG00000011946	rcl1	99	78.747	ENSPCOG00000009611	RCL1	98	78.747	Propithecus_coquereli
ENSKMAG00000011946	rcl1	99	78.202	ENSPVAG00000015752	RCL1	98	78.202	Pteropus_vampyrus
ENSKMAG00000011946	rcl1	100	89.516	ENSPNYG00000012910	rcl1	100	89.516	Pundamilia_nyererei
ENSKMAG00000011946	rcl1	99	81.030	ENSPNAG00000028307	rcl1	91	81.030	Pygocentrus_nattereri
ENSKMAG00000011946	rcl1	99	78.202	ENSRNOG00000015491	Rcl1	98	78.202	Rattus_norvegicus
ENSKMAG00000011946	rcl1	99	77.297	ENSRBIG00000035818	RCL1	99	77.297	Rhinopithecus_bieti
ENSKMAG00000011946	rcl1	99	77.568	ENSRROG00000029781	RCL1	99	77.568	Rhinopithecus_roxellana
ENSKMAG00000011946	rcl1	98	37.297	YOL010W	-	97	37.297	Saccharomyces_cerevisiae
ENSKMAG00000011946	rcl1	99	78.202	ENSSBOG00000026369	RCL1	98	78.202	Saimiri_boliviensis_boliviensis
ENSKMAG00000011946	rcl1	89	77.946	ENSSHAG00000014086	RCL1	100	77.946	Sarcophilus_harrisii
ENSKMAG00000011946	rcl1	100	80.108	ENSSFOG00015023020	rcl1	100	80.108	Scleropages_formosus
ENSKMAG00000011946	rcl1	100	91.129	ENSSMAG00000019751	rcl1	86	91.129	Scophthalmus_maximus
ENSKMAG00000011946	rcl1	100	92.742	ENSSDUG00000006349	rcl1	100	92.742	Seriola_dumerili
ENSKMAG00000011946	rcl1	100	91.935	ENSSLDG00000022076	rcl1	100	91.935	Seriola_lalandi_dorsalis
ENSKMAG00000011946	rcl1	99	78.202	ENSSARG00000009260	RCL1	98	78.202	Sorex_araneus
ENSKMAG00000011946	rcl1	99	75.405	ENSSPUG00000016330	RCL1	99	75.405	Sphenodon_punctatus
ENSKMAG00000011946	rcl1	100	92.473	ENSSPAG00000018038	rcl1	100	92.473	Stegastes_partitus
ENSKMAG00000011946	rcl1	99	78.202	ENSSSCG00000005217	RCL1	81	78.202	Sus_scrofa
ENSKMAG00000011946	rcl1	99	73.984	ENSTGUG00000005138	RCL1	98	73.984	Taeniopygia_guttata
ENSKMAG00000011946	rcl1	100	88.441	ENSTRUG00000010493	rcl1	100	88.441	Takifugu_rubripes
ENSKMAG00000011946	rcl1	100	85.753	ENSTNIG00000013214	rcl1	99	85.753	Tetraodon_nigroviridis
ENSKMAG00000011946	rcl1	99	73.569	ENSTBEG00000016339	RCL1	98	73.569	Tupaia_belangeri
ENSKMAG00000011946	rcl1	99	77.657	ENSTTRG00000016525	RCL1	98	77.657	Tursiops_truncatus
ENSKMAG00000011946	rcl1	99	79.292	ENSUAMG00000005598	RCL1	98	81.388	Ursus_americanus
ENSKMAG00000011946	rcl1	88	79.268	ENSUMAG00000017890	RCL1	97	79.268	Ursus_maritimus
ENSKMAG00000011946	rcl1	88	78.659	ENSVPAG00000009188	RCL1	100	78.659	Vicugna_pacos
ENSKMAG00000011946	rcl1	88	80.243	ENSVVUG00000007304	RCL1	89	80.243	Vulpes_vulpes
ENSKMAG00000011946	rcl1	100	71.200	ENSXETG00000000592	rcl1	100	71.200	Xenopus_tropicalis
ENSKMAG00000011946	rcl1	100	93.548	ENSXCOG00000004922	rcl1	100	93.548	Xiphophorus_couchianus
ENSKMAG00000011946	rcl1	100	93.548	ENSXMAG00000022366	RCL1	100	93.548	Xiphophorus_maculatus