EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000011990 (Gene tree)
Gene ID: 108243041
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3425 bases
Position: chrLWHD01000110.1:838415-841839
Accession: 108243041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016065	Clp1	PF06807.14	3.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016295	-	2349	XM_017428225	ENSKMAP00000016065	441 (aa)	XP_017283714	UPI0007F8BDE1

Gene Model

Click here to download ENSKMAG00000011990's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000011990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000011990	clp1	99	74.943	ENSG00000172409	CLP1	99	75.406	Homo_sapiens
ENSKMAG00000011990	clp1	100	93.878	ENSAPOG00000008242	clp1	100	93.878	Acanthochromis_polyacanthus
ENSKMAG00000011990	clp1	99	74.713	ENSAMEG00000014551	CLP1	99	74.713	Ailuropoda_melanoleuca
ENSKMAG00000011990	clp1	100	93.878	ENSACIG00000006310	clp1	99	93.878	Amphilophus_citrinellus
ENSKMAG00000011990	clp1	100	94.331	ENSAOCG00000010681	clp1	100	94.331	Amphiprion_ocellaris
ENSKMAG00000011990	clp1	100	94.331	ENSAPEG00000012165	clp1	100	94.331	Amphiprion_percula
ENSKMAG00000011990	clp1	100	94.331	ENSATEG00000012374	clp1	100	94.331	Anabas_testudineus
ENSKMAG00000011990	clp1	98	75.463	ENSACAG00000007139	CLP1	99	75.463	Anolis_carolinensis
ENSKMAG00000011990	clp1	99	74.943	ENSANAG00000034935	CLP1	99	75.406	Aotus_nancymaae
ENSKMAG00000011990	clp1	100	94.558	ENSACLG00000013573	clp1	100	94.558	Astatotilapia_calliptera
ENSKMAG00000011990	clp1	97	85.880	ENSAMXG00000014194	clp1	99	85.880	Astyanax_mexicanus
ENSKMAG00000011990	clp1	98	74.942	ENSBTAG00000006493	CLP1	99	74.942	Bos_taurus
ENSKMAG00000011990	clp1	95	47.991	WBGene00010304	clpf-1	97	47.991	Caenorhabditis_elegans
ENSKMAG00000011990	clp1	99	74.943	ENSCJAG00000008748	CLP1	99	75.406	Callithrix_jacchus
ENSKMAG00000011990	clp1	98	74.942	ENSCAFG00000007815	CLP1	99	74.942	Canis_familiaris
ENSKMAG00000011990	clp1	98	74.942	ENSCAFG00020000903	CLP1	99	74.942	Canis_lupus_dingo
ENSKMAG00000011990	clp1	98	75.406	ENSCHIG00000023497	CLP1	99	75.406	Capra_hircus
ENSKMAG00000011990	clp1	99	74.943	ENSTSYG00000006824	CLP1	99	74.943	Carlito_syrichta
ENSKMAG00000011990	clp1	98	75.231	ENSCAPG00000009703	CLP1	99	75.231	Cavia_aperea
ENSKMAG00000011990	clp1	96	75.943	ENSCPOG00000012554	CLP1	99	75.943	Cavia_porcellus
ENSKMAG00000011990	clp1	99	74.713	ENSCCAG00000031957	CLP1	99	74.713	Cebus_capucinus
ENSKMAG00000011990	clp1	100	73.923	ENSCATG00000044628	CLP1	99	75.406	Cercocebus_atys
ENSKMAG00000011990	clp1	98	75.174	ENSCLAG00000004094	CLP1	99	75.174	Chinchilla_lanigera
ENSKMAG00000011990	clp1	98	75.406	ENSCSAG00000005994	CLP1	99	75.406	Chlorocebus_sabaeus
ENSKMAG00000011990	clp1	98	75.231	ENSCPBG00000016843	CLP1	99	75.231	Chrysemys_picta_bellii
ENSKMAG00000011990	clp1	96	61.229	ENSCING00000003779	-	97	61.229	Ciona_intestinalis
ENSKMAG00000011990	clp1	98	60.789	ENSCSAVG00000003437	-	99	60.789	Ciona_savignyi
ENSKMAG00000011990	clp1	99	74.943	ENSCANG00000034335	CLP1	99	75.406	Colobus_angolensis_palliatus
ENSKMAG00000011990	clp1	98	74.537	ENSCGRG00001002227	CLP1	99	74.537	Cricetulus_griseus_chok1gshd
ENSKMAG00000011990	clp1	98	74.537	ENSCGRG00000004328	CLP1	99	74.537	Cricetulus_griseus_crigri
ENSKMAG00000011990	clp1	100	91.610	ENSCSEG00000008614	clp1	100	91.610	Cynoglossus_semilaevis
ENSKMAG00000011990	clp1	100	95.465	ENSCVAG00000020101	clp1	100	95.465	Cyprinodon_variegatus
ENSKMAG00000011990	clp1	100	84.753	ENSDARG00000063663	clp1	100	84.978	Danio_rerio
ENSKMAG00000011990	clp1	98	74.596	ENSDNOG00000042415	CLP1	90	74.596	Dasypus_novemcinctus
ENSKMAG00000011990	clp1	98	74.710	ENSDORG00000014685	Clp1	99	74.710	Dipodomys_ordii
ENSKMAG00000011990	clp1	95	53.828	FBgn0033842	cbc	97	53.828	Drosophila_melanogaster
ENSKMAG00000011990	clp1	98	75.174	ENSETEG00000003009	CLP1	99	75.174	Echinops_telfairi
ENSKMAG00000011990	clp1	98	64.965	ENSEBUG00000011648	clp1	99	64.965	Eptatretus_burgeri
ENSKMAG00000011990	clp1	98	75.406	ENSEASG00005002093	CLP1	99	75.406	Equus_asinus_asinus
ENSKMAG00000011990	clp1	99	75.172	ENSECAG00000011597	CLP1	99	75.406	Equus_caballus
ENSKMAG00000011990	clp1	98	74.478	ENSEEUG00000012771	CLP1	99	74.478	Erinaceus_europaeus
ENSKMAG00000011990	clp1	100	86.099	ENSELUG00000024048	clp1	100	86.099	Esox_lucius
ENSKMAG00000011990	clp1	99	74.713	ENSFCAG00000006633	CLP1	99	74.942	Felis_catus
ENSKMAG00000011990	clp1	98	75.231	ENSFALG00000011145	CLP1	99	75.231	Ficedula_albicollis
ENSKMAG00000011990	clp1	98	75.174	ENSFDAG00000000234	CLP1	99	75.174	Fukomys_damarensis
ENSKMAG00000011990	clp1	100	96.145	ENSFHEG00000014760	CLP1	100	96.145	Fundulus_heteroclitus
ENSKMAG00000011990	clp1	100	88.889	ENSGMOG00000019340	clp1	100	88.889	Gadus_morhua
ENSKMAG00000011990	clp1	98	75.463	ENSGALG00000007370	CLP1	99	75.463	Gallus_gallus
ENSKMAG00000011990	clp1	100	95.918	ENSGAFG00000003020	clp1	100	95.918	Gambusia_affinis
ENSKMAG00000011990	clp1	100	93.424	ENSGACG00000017832	clp1	100	93.424	Gasterosteus_aculeatus
ENSKMAG00000011990	clp1	98	75.231	ENSGAGG00000013279	CLP1	99	75.231	Gopherus_agassizii
ENSKMAG00000011990	clp1	99	74.943	ENSGGOG00000023006	CLP1	99	75.406	Gorilla_gorilla
ENSKMAG00000011990	clp1	100	94.785	ENSHBUG00000010436	clp1	100	94.785	Haplochromis_burtoni
ENSKMAG00000011990	clp1	98	75.174	ENSHGLG00000009914	CLP1	99	75.174	Heterocephalus_glaber_female
ENSKMAG00000011990	clp1	98	75.174	ENSHGLG00100006105	CLP1	99	75.174	Heterocephalus_glaber_male
ENSKMAG00000011990	clp1	100	93.197	ENSHCOG00000010072	clp1	100	93.197	Hippocampus_comes
ENSKMAG00000011990	clp1	100	84.187	ENSIPUG00000016238	clp1	99	84.187	Ictalurus_punctatus
ENSKMAG00000011990	clp1	98	75.174	ENSSTOG00000029257	CLP1	99	75.174	Ictidomys_tridecemlineatus
ENSKMAG00000011990	clp1	98	74.710	ENSJJAG00000023691	Clp1	99	74.710	Jaculus_jaculus
ENSKMAG00000011990	clp1	100	94.331	ENSLBEG00000010201	clp1	100	94.331	Labrus_bergylta
ENSKMAG00000011990	clp1	98	75.116	ENSLACG00000003160	CLP1	99	75.116	Latimeria_chalumnae
ENSKMAG00000011990	clp1	71	86.646	ENSLOCG00000008074	clp1	100	86.646	Lepisosteus_oculatus
ENSKMAG00000011990	clp1	98	74.942	ENSLAFG00000014907	CLP1	99	74.942	Loxodonta_africana
ENSKMAG00000011990	clp1	99	74.943	ENSMFAG00000046074	CLP1	99	75.406	Macaca_fascicularis
ENSKMAG00000011990	clp1	99	74.943	ENSMMUG00000038007	CLP1	99	74.943	Macaca_mulatta
ENSKMAG00000011990	clp1	98	75.406	ENSMNEG00000000259	CLP1	99	75.406	Macaca_nemestrina
ENSKMAG00000011990	clp1	99	74.943	ENSMLEG00000043556	CLP1	99	75.406	Mandrillus_leucophaeus
ENSKMAG00000011990	clp1	100	95.011	ENSMAMG00000002149	clp1	100	95.011	Mastacembelus_armatus
ENSKMAG00000011990	clp1	100	94.558	ENSMZEG00005002850	clp1	100	94.558	Maylandia_zebra
ENSKMAG00000011990	clp1	98	75.463	ENSMGAG00000009643	CLP1	99	75.463	Meleagris_gallopavo
ENSKMAG00000011990	clp1	98	74.074	ENSMAUG00000016261	Clp1	99	74.074	Mesocricetus_auratus
ENSKMAG00000011990	clp1	99	74.260	ENSMICG00000004895	CLP1	99	74.942	Microcebus_murinus
ENSKMAG00000011990	clp1	98	74.769	ENSMOCG00000005498	Clp1	99	74.769	Microtus_ochrogaster
ENSKMAG00000011990	clp1	100	92.744	ENSMMOG00000003229	clp1	100	92.744	Mola_mola
ENSKMAG00000011990	clp1	98	74.537	ENSMODG00000020107	-	99	74.537	Monodelphis_domestica
ENSKMAG00000011990	clp1	98	74.537	ENSMODG00000024148	-	99	74.537	Monodelphis_domestica
ENSKMAG00000011990	clp1	100	95.011	ENSMALG00000014239	clp1	100	95.011	Monopterus_albus
ENSKMAG00000011990	clp1	98	74.537	MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	Mus_caroli
ENSKMAG00000011990	clp1	98	74.537	ENSMUSG00000027079	Clp1	99	74.537	Mus_musculus
ENSKMAG00000011990	clp1	98	74.306	MGP_PahariEiJ_G0025177	Clp1	99	74.306	Mus_pahari
ENSKMAG00000011990	clp1	98	74.537	MGP_SPRETEiJ_G0024646	Clp1	99	74.537	Mus_spretus
ENSKMAG00000011990	clp1	98	74.942	ENSMPUG00000000268	CLP1	99	74.942	Mustela_putorius_furo
ENSKMAG00000011990	clp1	99	74.943	ENSMLUG00000007904	CLP1	99	74.943	Myotis_lucifugus
ENSKMAG00000011990	clp1	98	74.710	ENSNGAG00000006165	Clp1	99	74.710	Nannospalax_galili
ENSKMAG00000011990	clp1	100	94.104	ENSNBRG00000005225	clp1	100	94.104	Neolamprologus_brichardi
ENSKMAG00000011990	clp1	80	69.412	ENSNLEG00000012809	-	99	69.412	Nomascus_leucogenys
ENSKMAG00000011990	clp1	98	74.424	ENSMEUG00000010949	CLP1	100	74.424	Notamacropus_eugenii
ENSKMAG00000011990	clp1	69	77.228	ENSOPRG00000007329	CLP1	100	77.228	Ochotona_princeps
ENSKMAG00000011990	clp1	98	75.174	ENSODEG00000011410	CLP1	99	75.174	Octodon_degus
ENSKMAG00000011990	clp1	100	94.104	ENSONIG00000005089	clp1	100	94.104	Oreochromis_niloticus
ENSKMAG00000011990	clp1	99	74.713	ENSOCUG00000007045	CLP1	99	74.713	Oryctolagus_cuniculus
ENSKMAG00000011990	clp1	100	94.104	ENSORLG00000003647	clp1	100	94.104	Oryzias_latipes
ENSKMAG00000011990	clp1	100	93.878	ENSORLG00020016676	clp1	100	93.878	Oryzias_latipes_hni
ENSKMAG00000011990	clp1	100	94.104	ENSORLG00015019484	clp1	100	94.104	Oryzias_latipes_hsok
ENSKMAG00000011990	clp1	100	94.104	ENSOMEG00000021303	clp1	100	94.104	Oryzias_melastigma
ENSKMAG00000011990	clp1	98	74.942	ENSOGAG00000004508	CLP1	99	74.942	Otolemur_garnettii
ENSKMAG00000011990	clp1	98	74.194	ENSOARG00000010145	CLP1	99	74.194	Ovis_aries
ENSKMAG00000011990	clp1	99	74.943	ENSPPAG00000041519	CLP1	99	75.406	Pan_paniscus
ENSKMAG00000011990	clp1	98	74.942	ENSPPRG00000006135	CLP1	99	74.942	Panthera_pardus
ENSKMAG00000011990	clp1	98	74.942	ENSPTIG00000015866	CLP1	99	74.942	Panthera_tigris_altaica
ENSKMAG00000011990	clp1	98	75.406	ENSPTRG00000047318	CLP1	99	75.406	Pan_troglodytes
ENSKMAG00000011990	clp1	99	74.943	ENSPANG00000017078	CLP1	98	74.943	Papio_anubis
ENSKMAG00000011990	clp1	100	85.393	ENSPKIG00000007697	clp1	100	85.843	Paramormyrops_kingsleyae
ENSKMAG00000011990	clp1	93	72.616	ENSPSIG00000005468	CLP1	99	72.616	Pelodiscus_sinensis
ENSKMAG00000011990	clp1	100	92.290	ENSPMGG00000012171	clp1	100	92.290	Periophthalmus_magnuspinnatus
ENSKMAG00000011990	clp1	98	74.769	ENSPEMG00000011213	-	99	74.769	Peromyscus_maniculatus_bairdii
ENSKMAG00000011990	clp1	97	66.200	ENSPMAG00000006707	clp1	99	66.200	Petromyzon_marinus
ENSKMAG00000011990	clp1	98	74.769	ENSPCIG00000011899	CLP1	99	74.769	Phascolarctos_cinereus
ENSKMAG00000011990	clp1	100	95.918	ENSPFOG00000008169	clp1	100	95.918	Poecilia_formosa
ENSKMAG00000011990	clp1	100	95.918	ENSPLAG00000022388	clp1	100	95.918	Poecilia_latipinna
ENSKMAG00000011990	clp1	100	95.918	ENSPMEG00000021088	clp1	100	95.918	Poecilia_mexicana
ENSKMAG00000011990	clp1	100	96.372	ENSPREG00000017802	clp1	100	96.372	Poecilia_reticulata
ENSKMAG00000011990	clp1	52	73.799	ENSPPYG00000003266	-	100	73.799	Pongo_abelii
ENSKMAG00000011990	clp1	99	74.713	ENSPCOG00000000360	CLP1	99	74.713	Propithecus_coquereli
ENSKMAG00000011990	clp1	98	74.942	ENSPVAG00000016270	CLP1	99	74.942	Pteropus_vampyrus
ENSKMAG00000011990	clp1	100	94.785	ENSPNYG00000017274	clp1	99	94.785	Pundamilia_nyererei
ENSKMAG00000011990	clp1	100	84.821	ENSPNAG00000026460	clp1	100	85.268	Pygocentrus_nattereri
ENSKMAG00000011990	clp1	98	74.537	ENSRNOG00000007416	Clp1	99	74.537	Rattus_norvegicus
ENSKMAG00000011990	clp1	98	75.406	ENSRBIG00000018191	CLP1	99	75.406	Rhinopithecus_bieti
ENSKMAG00000011990	clp1	99	74.943	ENSRROG00000039265	CLP1	99	75.406	Rhinopithecus_roxellana
ENSKMAG00000011990	clp1	94	62.560	ENSSBOG00000010558	-	93	62.560	Saimiri_boliviensis_boliviensis
ENSKMAG00000011990	clp1	98	75.406	ENSSBOG00000032517	-	99	75.406	Saimiri_boliviensis_boliviensis
ENSKMAG00000011990	clp1	98	74.769	ENSSHAG00000015695	CLP1	99	74.769	Sarcophilus_harrisii
ENSKMAG00000011990	clp1	100	83.885	ENSSFOG00015000628	clp1	100	83.885	Scleropages_formosus
ENSKMAG00000011990	clp1	100	93.878	ENSSMAG00000019423	clp1	99	93.878	Scophthalmus_maximus
ENSKMAG00000011990	clp1	100	94.785	ENSSDUG00000014495	clp1	100	94.785	Seriola_dumerili
ENSKMAG00000011990	clp1	100	94.558	ENSSLDG00000000937	clp1	100	94.558	Seriola_lalandi_dorsalis
ENSKMAG00000011990	clp1	52	73.684	ENSSARG00000002459	CLP1	100	73.684	Sorex_araneus
ENSKMAG00000011990	clp1	98	75.000	ENSSPUG00000016811	CLP1	99	75.000	Sphenodon_punctatus
ENSKMAG00000011990	clp1	100	93.878	ENSSPAG00000016052	clp1	100	93.878	Stegastes_partitus
ENSKMAG00000011990	clp1	98	74.942	ENSSSCG00000031442	CLP1	99	74.942	Sus_scrofa
ENSKMAG00000011990	clp1	98	75.231	ENSTGUG00000007002	CLP1	99	75.231	Taeniopygia_guttata
ENSKMAG00000011990	clp1	100	90.930	ENSTRUG00000012602	clp1	100	90.930	Takifugu_rubripes
ENSKMAG00000011990	clp1	100	90.476	ENSTNIG00000013125	clp1	100	90.476	Tetraodon_nigroviridis
ENSKMAG00000011990	clp1	98	74.478	ENSTBEG00000009975	CLP1	99	74.478	Tupaia_belangeri
ENSKMAG00000011990	clp1	98	74.942	ENSTTRG00000002096	CLP1	99	74.942	Tursiops_truncatus
ENSKMAG00000011990	clp1	98	74.942	ENSUAMG00000011388	CLP1	99	74.942	Ursus_americanus
ENSKMAG00000011990	clp1	98	74.942	ENSUMAG00000018317	CLP1	99	74.942	Ursus_maritimus
ENSKMAG00000011990	clp1	100	73.923	ENSVVUG00000017138	CLP1	99	73.923	Vulpes_vulpes
ENSKMAG00000011990	clp1	98	71.493	ENSXETG00000007088	clp1	99	71.719	Xenopus_tropicalis
ENSKMAG00000011990	clp1	100	96.145	ENSXCOG00000002287	clp1	100	96.145	Xiphophorus_couchianus
ENSKMAG00000011990	clp1	100	96.145	ENSXMAG00000009783	clp1	100	96.145	Xiphophorus_maculatus