EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000012003 (Gene tree)
Gene ID: 108241902
Gene Symbol: -
Alias: -
Full Name: protein SON-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 31956 bases
Position: chrLWHD01000092.1:1090293-1122248
Accession: 108241902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016071	dsrm	PF00035.26	2.2e-11	1	1
ENSKMAP00000016071	DND1_DSRM	PF14709.7	1.7e-11	1	1
ENSKMAP00000016071	G-patch	PF01585.23	7.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016301	-	3397	XM_017426385	ENSKMAP00000016071	959 (aa)	XP_017281874	UPI0007F8FC71

Gene Model

Click here to download ENSKMAG00000012003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012003	-	100	71.827	ENSAPOG00000000559	-	100	71.414	Acanthochromis_polyacanthus
ENSKMAG00000012003	-	100	69.846	ENSAOCG00000004262	-	100	69.856	Amphiprion_ocellaris
ENSKMAG00000012003	-	100	69.949	ENSAPEG00000009136	-	100	70.062	Amphiprion_percula
ENSKMAG00000012003	-	58	82.609	ENSATEG00000012732	-	98	78.669	Anabas_testudineus
ENSKMAG00000012003	-	100	66.667	ENSACLG00000007065	-	100	66.632	Astatotilapia_calliptera
ENSKMAG00000012003	-	56	65.480	ENSAMXG00000038259	-	65	65.836	Astyanax_mexicanus
ENSKMAG00000012003	-	100	71.355	ENSFHEG00000019700	-	100	69.694	Fundulus_heteroclitus
ENSKMAG00000012003	-	52	46.850	ENSGALG00000052354	-	81	46.491	Gallus_gallus
ENSKMAG00000012003	-	100	69.121	ENSGAFG00000016463	-	100	70.041	Gambusia_affinis
ENSKMAG00000012003	-	92	68.516	ENSHBUG00000001964	-	96	68.707	Haplochromis_burtoni
ENSKMAG00000012003	-	75	74.044	ENSLBEG00000008600	-	100	68.061	Labrus_bergylta
ENSKMAG00000012003	-	94	64.885	ENSMAMG00000003082	-	95	65.692	Mastacembelus_armatus
ENSKMAG00000012003	-	100	66.770	ENSMZEG00005018999	-	100	66.632	Maylandia_zebra
ENSKMAG00000012003	-	51	44.828	ENSMGAG00000014526	-	94	44.401	Meleagris_gallopavo
ENSKMAG00000012003	-	100	59.941	ENSORLG00000027334	-	100	58.374	Oryzias_latipes
ENSKMAG00000012003	-	50	55.094	ENSORLG00020014016	-	89	55.208	Oryzias_latipes_hni
ENSKMAG00000012003	-	100	70.492	ENSPLAG00000008338	-	100	70.594	Poecilia_latipinna
ENSKMAG00000012003	-	100	70.799	ENSPMEG00000017611	-	100	70.799	Poecilia_mexicana
ENSKMAG00000012003	-	100	70.714	ENSPREG00000017979	-	100	70.714	Poecilia_reticulata
ENSKMAG00000012003	-	59	58.685	ENSPNAG00000009991	-	66	64.965	Pygocentrus_nattereri
ENSKMAG00000012003	-	100	66.330	ENSSMAG00000000065	-	99	69.024	Scophthalmus_maximus
ENSKMAG00000012003	-	100	68.534	ENSSDUG00000018550	-	100	68.325	Seriola_dumerili
ENSKMAG00000012003	-	100	72.273	ENSSPAG00000014575	-	100	72.579	Stegastes_partitus
ENSKMAG00000012003	-	100	61.043	ENSTRUG00000019967	-	100	60.634	Takifugu_rubripes
ENSKMAG00000012003	-	100	70.619	ENSXMAG00000025239	-	100	70.619	Xiphophorus_maculatus