EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012060 (Gene tree)
Gene ID: 108232155
Gene Symbol: ddx23
Alias: wu:fi39b12|zgc:63742
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 7973 bases
Position: chrLWHD01000014.1:2783024-2790996
Accession: 108232155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016211	DEAD	PF00270.29	7e-53	1	1
ENSKMAP00000016183	DEAD	PF00270.29	9.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016413	-	4133	XM_017409766	ENSKMAP00000016183	817 (aa)	XP_017265255	UPI0007F92FA9
ENSKMAT00000016440	-	2214	-	ENSKMAP00000016211	737 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012060's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012060	ddx23	59	30.649	ENSKMAG00000022270	ddx52	85	30.952
ENSKMAG00000012060	ddx23	55	33.252	ENSKMAG00000014889	ddx27	50	33.252
ENSKMAG00000012060	ddx23	57	39.858	ENSKMAG00000011257	DDX5	72	38.889
ENSKMAG00000012060	ddx23	59	31.724	ENSKMAG00000007213	-	80	31.724
ENSKMAG00000012060	ddx23	55	31.311	ENSKMAG00000004019	eif4a2	91	31.311
ENSKMAG00000012060	ddx23	54	30.508	ENSKMAG00000022006	ddx55	64	30.508
ENSKMAG00000012060	ddx23	63	38.758	ENSKMAG00000012930	ddx5	69	38.758
ENSKMAG00000012060	ddx23	55	30.751	ENSKMAG00000006928	eif4a1b	92	30.751
ENSKMAG00000012060	ddx23	51	31.008	ENSKMAG00000005975	ddx18	79	41.615
ENSKMAG00000012060	ddx23	50	30.585	ENSKMAG00000010113	eif4a3	80	30.469
ENSKMAG00000012060	ddx23	56	39.671	ENSKMAG00000012633	-	59	37.923
ENSKMAG00000012060	ddx23	57	36.124	ENSKMAG00000012439	ddx4	61	36.585
ENSKMAG00000012060	ddx23	57	39.401	ENSKMAG00000021636	-	64	38.581
ENSKMAG00000012060	ddx23	58	39.359	ENSKMAG00000016167	ddx43	58	39.359
ENSKMAG00000012060	ddx23	53	36.203	ENSKMAG00000013071	ddx47	73	36.203
ENSKMAG00000012060	ddx23	50	30.446	ENSKMAG00000018183	ddx28	64	30.526
ENSKMAG00000012060	ddx23	56	38.967	ENSKMAG00000011081	-	60	38.967
ENSKMAG00000012060	ddx23	58	39.955	ENSKMAG00000019331	DDX41	67	39.955
ENSKMAG00000012060	ddx23	56	31.401	ENSKMAG00000003546	ddx6	77	31.401
ENSKMAG00000012060	ddx23	51	33.162	ENSKMAG00000004909	ddx49	74	33.162
ENSKMAG00000012060	ddx23	58	35.648	ENSKMAG00000007764	ddx59	64	35.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012060	ddx23	100	84.121	ENSG00000174243	DDX23	95	84.944	Homo_sapiens
ENSKMAG00000012060	ddx23	100	94.132	ENSAPOG00000003760	ddx23	100	94.132	Acanthochromis_polyacanthus
ENSKMAG00000012060	ddx23	100	83.254	ENSAMEG00000007123	DDX23	95	84.944	Ailuropoda_melanoleuca
ENSKMAG00000012060	ddx23	100	91.777	ENSACIG00000000022	ddx23	100	91.777	Amphilophus_citrinellus
ENSKMAG00000012060	ddx23	100	94.132	ENSAOCG00000017348	ddx23	100	94.132	Amphiprion_ocellaris
ENSKMAG00000012060	ddx23	100	93.888	ENSAPEG00000016857	ddx23	100	93.765	Amphiprion_percula
ENSKMAG00000012060	ddx23	100	93.276	ENSATEG00000016800	ddx23	100	92.910	Anabas_testudineus
ENSKMAG00000012060	ddx23	90	83.384	ENSAPLG00000002868	DDX23	84	83.671	Anas_platyrhynchos
ENSKMAG00000012060	ddx23	90	91.515	ENSACAG00000025589	DDX23	92	85.287	Anolis_carolinensis
ENSKMAG00000012060	ddx23	100	84.242	ENSANAG00000018663	DDX23	95	85.069	Aotus_nancymaae
ENSKMAG00000012060	ddx23	94	90.874	ENSAMXG00000017597	ddx23	100	85.645	Astyanax_mexicanus
ENSKMAG00000012060	ddx23	100	84.000	ENSBTAG00000021810	DDX23	95	84.944	Bos_taurus
ENSKMAG00000012060	ddx23	80	66.105	WBGene00017162	ddx-23	80	66.105	Caenorhabditis_elegans
ENSKMAG00000012060	ddx23	100	84.242	ENSCJAG00000020775	DDX23	95	85.069	Callithrix_jacchus
ENSKMAG00000012060	ddx23	100	84.000	ENSCAFG00000025422	DDX23	100	82.134	Canis_familiaris
ENSKMAG00000012060	ddx23	100	84.000	ENSCAFG00020013383	DDX23	100	82.134	Canis_lupus_dingo
ENSKMAG00000012060	ddx23	100	83.879	ENSCHIG00000018783	DDX23	95	84.818	Capra_hircus
ENSKMAG00000012060	ddx23	100	83.758	ENSTSYG00000005429	DDX23	95	84.956	Carlito_syrichta
ENSKMAG00000012060	ddx23	100	84.102	ENSCPOG00000003278	DDX23	100	82.974	Cavia_porcellus
ENSKMAG00000012060	ddx23	89	95.000	ENSCCAG00000029177	DDX23	95	95.000	Cebus_capucinus
ENSKMAG00000012060	ddx23	100	70.752	ENSCATG00000032335	-	98	71.321	Cercocebus_atys
ENSKMAG00000012060	ddx23	100	84.121	ENSCATG00000039797	DDX23	95	84.944	Cercocebus_atys
ENSKMAG00000012060	ddx23	99	85.286	ENSCLAG00000002986	DDX23	100	82.734	Chinchilla_lanigera
ENSKMAG00000012060	ddx23	100	84.121	ENSCSAG00000006240	DDX23	95	84.944	Chlorocebus_sabaeus
ENSKMAG00000012060	ddx23	84	82.107	ENSCHOG00000009027	DDX23	100	80.199	Choloepus_hoffmanni
ENSKMAG00000012060	ddx23	100	84.166	ENSCPBG00000019988	DDX23	96	85.589	Chrysemys_picta_bellii
ENSKMAG00000012060	ddx23	98	69.512	ENSCING00000001913	-	93	72.230	Ciona_intestinalis
ENSKMAG00000012060	ddx23	90	66.465	ENSCSAVG00000004158	-	100	67.009	Ciona_savignyi
ENSKMAG00000012060	ddx23	100	68.274	ENSCANG00000042510	-	90	75.630	Colobus_angolensis_palliatus
ENSKMAG00000012060	ddx23	90	92.273	ENSCANG00000040182	DDX23	100	90.042	Colobus_angolensis_palliatus
ENSKMAG00000012060	ddx23	100	84.185	ENSCGRG00001015090	Ddx23	96	84.944	Cricetulus_griseus_chok1gshd
ENSKMAG00000012060	ddx23	100	84.185	ENSCGRG00000016314	Ddx23	96	84.944	Cricetulus_griseus_crigri
ENSKMAG00000012060	ddx23	100	88.984	ENSCSEG00000020970	ddx23	100	91.076	Cynoglossus_semilaevis
ENSKMAG00000012060	ddx23	100	93.513	ENSCVAG00000015745	ddx23	100	93.023	Cyprinodon_variegatus
ENSKMAG00000012060	ddx23	90	94.545	ENSDARG00000021945	ddx23	100	86.957	Danio_rerio
ENSKMAG00000012060	ddx23	100	84.364	ENSDNOG00000043176	DDX23	100	82.734	Dasypus_novemcinctus
ENSKMAG00000012060	ddx23	100	83.373	ENSDORG00000012659	Ddx23	95	85.069	Dipodomys_ordii
ENSKMAG00000012060	ddx23	97	63.614	FBgn0032690	CG10333	87	70.126	Drosophila_melanogaster
ENSKMAG00000012060	ddx23	90	89.697	ENSETEG00000015816	DDX23	94	83.483	Echinops_telfairi
ENSKMAG00000012060	ddx23	98	77.931	ENSEBUG00000003319	ddx23	93	85.152	Eptatretus_burgeri
ENSKMAG00000012060	ddx23	100	83.254	ENSEASG00005000455	DDX23	95	85.069	Equus_asinus_asinus
ENSKMAG00000012060	ddx23	100	83.373	ENSECAG00000016681	DDX23	95	85.069	Equus_caballus
ENSKMAG00000012060	ddx23	100	76.372	ENSEEUG00000009658	DDX23	93	77.593	Erinaceus_europaeus
ENSKMAG00000012060	ddx23	100	88.578	ENSELUG00000015358	ddx23	100	87.908	Esox_lucius
ENSKMAG00000012060	ddx23	100	84.000	ENSFCAG00000000082	DDX23	95	84.818	Felis_catus
ENSKMAG00000012060	ddx23	90	88.788	ENSFALG00000000133	DDX23	94	83.333	Ficedula_albicollis
ENSKMAG00000012060	ddx23	100	84.485	ENSFDAG00000017059	DDX23	100	82.974	Fukomys_damarensis
ENSKMAG00000012060	ddx23	97	95.455	ENSFHEG00000017499	ddx23	97	95.455	Fundulus_heteroclitus
ENSKMAG00000012060	ddx23	99	87.546	ENSGMOG00000009592	ddx23	98	87.659	Gadus_morhua
ENSKMAG00000012060	ddx23	98	85.190	ENSGALG00000032307	DDX23	100	82.614	Gallus_gallus
ENSKMAG00000012060	ddx23	100	93.765	ENSGAFG00000012366	ddx23	100	93.765	Gambusia_affinis
ENSKMAG00000012060	ddx23	99	89.370	ENSGACG00000003024	ddx23	99	94.966	Gasterosteus_aculeatus
ENSKMAG00000012060	ddx23	100	84.166	ENSGAGG00000007790	DDX23	96	85.589	Gopherus_agassizii
ENSKMAG00000012060	ddx23	100	84.121	ENSGGOG00000015252	DDX23	100	93.750	Gorilla_gorilla
ENSKMAG00000012060	ddx23	97	96.970	ENSHBUG00000011876	ddx23	100	93.399	Haplochromis_burtoni
ENSKMAG00000012060	ddx23	99	85.422	ENSHGLG00000004292	DDX23	95	85.335	Heterocephalus_glaber_female
ENSKMAG00000012060	ddx23	99	85.422	ENSHGLG00100017585	DDX23	95	85.335	Heterocephalus_glaber_male
ENSKMAG00000012060	ddx23	100	91.198	ENSHCOG00000019338	ddx23	100	92.054	Hippocampus_comes
ENSKMAG00000012060	ddx23	90	94.242	ENSIPUG00000005247	DDX23	100	87.500	Ictalurus_punctatus
ENSKMAG00000012060	ddx23	100	84.000	ENSSTOG00000004219	DDX23	95	85.069	Ictidomys_tridecemlineatus
ENSKMAG00000012060	ddx23	100	84.121	ENSJJAG00000018994	Ddx23	95	84.818	Jaculus_jaculus
ENSKMAG00000012060	ddx23	100	91.443	ENSLBEG00000019475	ddx23	100	90.954	Labrus_bergylta
ENSKMAG00000012060	ddx23	90	91.515	ENSLACG00000016977	DDX23	97	89.026	Latimeria_chalumnae
ENSKMAG00000012060	ddx23	100	87.760	ENSLOCG00000007385	ddx23	100	88.058	Lepisosteus_oculatus
ENSKMAG00000012060	ddx23	100	83.879	ENSLAFG00000014227	DDX23	100	82.494	Loxodonta_africana
ENSKMAG00000012060	ddx23	100	84.121	ENSMFAG00000038666	DDX23	95	84.944	Macaca_fascicularis
ENSKMAG00000012060	ddx23	100	84.121	ENSMMUG00000008432	DDX23	100	93.750	Macaca_mulatta
ENSKMAG00000012060	ddx23	100	83.879	ENSMNEG00000040016	DDX23	95	84.693	Macaca_nemestrina
ENSKMAG00000012060	ddx23	100	70.823	ENSMNEG00000045260	-	88	76.297	Macaca_nemestrina
ENSKMAG00000012060	ddx23	100	69.910	ENSMLEG00000035096	-	95	71.467	Mandrillus_leucophaeus
ENSKMAG00000012060	ddx23	100	84.121	ENSMLEG00000042846	DDX23	95	84.944	Mandrillus_leucophaeus
ENSKMAG00000012060	ddx23	100	93.154	ENSMAMG00000024144	ddx23	100	93.643	Mastacembelus_armatus
ENSKMAG00000012060	ddx23	97	96.818	ENSMZEG00005026086	ddx23	100	93.399	Maylandia_zebra
ENSKMAG00000012060	ddx23	98	86.326	ENSMAUG00000012336	Ddx23	96	84.944	Mesocricetus_auratus
ENSKMAG00000012060	ddx23	98	85.464	ENSMICG00000017541	DDX23	95	84.316	Microcebus_murinus
ENSKMAG00000012060	ddx23	98	84.966	ENSMOCG00000018987	Ddx23	96	85.069	Microtus_ochrogaster
ENSKMAG00000012060	ddx23	100	86.010	ENSMMOG00000012406	ddx23	100	84.067	Mola_mola
ENSKMAG00000012060	ddx23	90	92.121	ENSMODG00000009975	DDX23	100	82.614	Monodelphis_domestica
ENSKMAG00000012060	ddx23	100	93.023	ENSMALG00000022366	ddx23	100	92.166	Monopterus_albus
ENSKMAG00000012060	ddx23	100	83.942	MGP_CAROLIEiJ_G0020240	Ddx23	96	84.442	Mus_caroli
ENSKMAG00000012060	ddx23	100	84.063	ENSMUSG00000003360	Ddx23	96	84.567	Mus_musculus
ENSKMAG00000012060	ddx23	97	85.000	MGP_PahariEiJ_G0020243	Ddx23	96	84.693	Mus_pahari
ENSKMAG00000012060	ddx23	100	84.063	MGP_SPRETEiJ_G0021137	Ddx23	96	84.567	Mus_spretus
ENSKMAG00000012060	ddx23	100	84.121	ENSMPUG00000014739	DDX23	95	84.944	Mustela_putorius_furo
ENSKMAG00000012060	ddx23	100	84.466	ENSMLUG00000011033	-	95	84.567	Myotis_lucifugus
ENSKMAG00000012060	ddx23	100	81.598	ENSMLUG00000003683	-	94	82.570	Myotis_lucifugus
ENSKMAG00000012060	ddx23	100	84.242	ENSNGAG00000019018	Ddx23	95	84.567	Nannospalax_galili
ENSKMAG00000012060	ddx23	100	89.460	ENSNBRG00000022928	ddx23	100	90.426	Neolamprologus_brichardi
ENSKMAG00000012060	ddx23	100	77.455	ENSNLEG00000017864	DDX23	100	76.139	Nomascus_leucogenys
ENSKMAG00000012060	ddx23	90	92.121	ENSMEUG00000009477	DDX23	100	82.734	Notamacropus_eugenii
ENSKMAG00000012060	ddx23	98	85.464	ENSOPRG00000007170	-	95	84.145	Ochotona_princeps
ENSKMAG00000012060	ddx23	99	85.559	ENSODEG00000003592	DDX23	100	83.094	Octodon_degus
ENSKMAG00000012060	ddx23	97	96.818	ENSONIG00000017048	ddx23	100	93.399	Oreochromis_niloticus
ENSKMAG00000012060	ddx23	100	83.879	ENSOCUG00000001414	DDX23	96	84.518	Oryctolagus_cuniculus
ENSKMAG00000012060	ddx23	97	95.909	ENSORLG00000012330	ddx23	100	90.720	Oryzias_latipes
ENSKMAG00000012060	ddx23	97	96.061	ENSORLG00020017586	ddx23	100	90.842	Oryzias_latipes_hni
ENSKMAG00000012060	ddx23	100	91.114	ENSORLG00015012361	ddx23	100	91.114	Oryzias_latipes_hsok
ENSKMAG00000012060	ddx23	97	97.576	ENSOMEG00000006453	ddx23	95	97.576	Oryzias_melastigma
ENSKMAG00000012060	ddx23	100	84.364	ENSOGAG00000016813	DDX23	95	85.069	Otolemur_garnettii
ENSKMAG00000012060	ddx23	100	83.879	ENSOARG00000019105	DDX23	86	84.925	Ovis_aries
ENSKMAG00000012060	ddx23	100	62.061	ENSPPAG00000038775	-	100	59.191	Pan_paniscus
ENSKMAG00000012060	ddx23	100	84.121	ENSPPAG00000037807	DDX23	100	93.750	Pan_paniscus
ENSKMAG00000012060	ddx23	100	84.000	ENSPPRG00000015345	DDX23	95	84.818	Panthera_pardus
ENSKMAG00000012060	ddx23	100	84.000	ENSPTIG00000018873	DDX23	95	84.818	Panthera_tigris_altaica
ENSKMAG00000012060	ddx23	100	64.970	ENSPTRG00000051972	-	94	64.465	Pan_troglodytes
ENSKMAG00000012060	ddx23	100	84.000	ENSPTRG00000004887	DDX23	100	93.750	Pan_troglodytes
ENSKMAG00000012060	ddx23	86	84.137	ENSPANG00000035074	-	93	84.137	Papio_anubis
ENSKMAG00000012060	ddx23	100	84.121	ENSPANG00000019459	DDX23	88	84.693	Papio_anubis
ENSKMAG00000012060	ddx23	100	87.046	ENSPKIG00000024110	ddx23	100	88.072	Paramormyrops_kingsleyae
ENSKMAG00000012060	ddx23	100	73.504	ENSPSIG00000002834	DDX23	96	77.030	Pelodiscus_sinensis
ENSKMAG00000012060	ddx23	100	88.586	ENSPMGG00000010243	ddx23	100	86.447	Periophthalmus_magnuspinnatus
ENSKMAG00000012060	ddx23	100	84.185	ENSPEMG00000011305	Ddx23	96	85.069	Peromyscus_maniculatus_bairdii
ENSKMAG00000012060	ddx23	90	84.848	ENSPMAG00000008625	ddx23	98	82.561	Petromyzon_marinus
ENSKMAG00000012060	ddx23	90	92.121	ENSPCIG00000027691	DDX23	100	82.734	Phascolarctos_cinereus
ENSKMAG00000012060	ddx23	97	96.970	ENSPFOG00000012159	ddx23	100	94.024	Poecilia_formosa
ENSKMAG00000012060	ddx23	100	94.125	ENSPLAG00000005052	ddx23	100	94.370	Poecilia_latipinna
ENSKMAG00000012060	ddx23	100	94.614	ENSPMEG00000015385	ddx23	100	94.614	Poecilia_mexicana
ENSKMAG00000012060	ddx23	100	94.377	ENSPREG00000007074	ddx23	100	94.132	Poecilia_reticulata
ENSKMAG00000012060	ddx23	100	84.121	ENSPPYG00000004468	DDX23	92	85.050	Pongo_abelii
ENSKMAG00000012060	ddx23	90	92.576	ENSPCAG00000002016	DDX23	87	90.182	Procavia_capensis
ENSKMAG00000012060	ddx23	100	84.000	ENSPCOG00000025915	DDX23	100	93.750	Propithecus_coquereli
ENSKMAG00000012060	ddx23	100	84.121	ENSPVAG00000009818	DDX23	95	84.944	Pteropus_vampyrus
ENSKMAG00000012060	ddx23	97	96.818	ENSPNYG00000021038	ddx23	100	90.495	Pundamilia_nyererei
ENSKMAG00000012060	ddx23	100	89.688	ENSPNAG00000019203	ddx23	99	90.405	Pygocentrus_nattereri
ENSKMAG00000012060	ddx23	100	84.063	ENSRNOG00000060154	Ddx23	96	84.567	Rattus_norvegicus
ENSKMAG00000012060	ddx23	98	75.928	ENSRBIG00000040362	DDX23	95	72.864	Rhinopithecus_bieti
ENSKMAG00000012060	ddx23	100	70.270	ENSRBIG00000036337	-	91	77.652	Rhinopithecus_bieti
ENSKMAG00000012060	ddx23	100	71.224	ENSRROG00000045747	-	92	77.652	Rhinopithecus_roxellana
ENSKMAG00000012060	ddx23	100	84.121	ENSRROG00000028964	DDX23	95	84.944	Rhinopithecus_roxellana
ENSKMAG00000012060	ddx23	78	36.735	YDR243C	-	81	38.848	Saccharomyces_cerevisiae
ENSKMAG00000012060	ddx23	100	84.242	ENSSBOG00000025799	DDX23	95	85.176	Saimiri_boliviensis_boliviensis
ENSKMAG00000012060	ddx23	90	92.121	ENSSHAG00000006590	DDX23	100	82.734	Sarcophilus_harrisii
ENSKMAG00000012060	ddx23	90	95.303	ENSSFOG00015013273	ddx23	100	89.036	Scleropages_formosus
ENSKMAG00000012060	ddx23	100	89.988	ENSSMAG00000000529	ddx23	100	88.889	Scophthalmus_maximus
ENSKMAG00000012060	ddx23	97	96.667	ENSSDUG00000022459	ddx23	98	96.667	Seriola_dumerili
ENSKMAG00000012060	ddx23	100	93.521	ENSSLDG00000010453	ddx23	100	93.521	Seriola_lalandi_dorsalis
ENSKMAG00000012060	ddx23	89	94.150	ENSSARG00000004534	DDX23	88	94.150	Sorex_araneus
ENSKMAG00000012060	ddx23	100	84.951	ENSSPUG00000016044	DDX23	95	85.732	Sphenodon_punctatus
ENSKMAG00000012060	ddx23	97	96.667	ENSSPAG00000016482	ddx23	100	93.399	Stegastes_partitus
ENSKMAG00000012060	ddx23	100	83.493	ENSSSCG00000000176	DDX23	95	85.069	Sus_scrofa
ENSKMAG00000012060	ddx23	100	87.286	ENSTRUG00000000455	ddx23	100	87.531	Takifugu_rubripes
ENSKMAG00000012060	ddx23	90	92.273	ENSTBEG00000016909	DDX23	87	90.042	Tupaia_belangeri
ENSKMAG00000012060	ddx23	100	77.939	ENSTTRG00000004604	DDX23	100	76.647	Tursiops_truncatus
ENSKMAG00000012060	ddx23	100	83.373	ENSUAMG00000027082	DDX23	95	85.069	Ursus_americanus
ENSKMAG00000012060	ddx23	100	83.373	ENSUMAG00000006538	DDX23	95	85.069	Ursus_maritimus
ENSKMAG00000012060	ddx23	100	84.000	ENSVVUG00000019648	DDX23	100	82.134	Vulpes_vulpes
ENSKMAG00000012060	ddx23	100	78.999	ENSXETG00000009807	ddx23	100	79.465	Xenopus_tropicalis
ENSKMAG00000012060	ddx23	100	90.575	ENSXCOG00000011648	ddx23	100	90.575	Xiphophorus_couchianus
ENSKMAG00000012060	ddx23	100	94.743	ENSXMAG00000017387	ddx23	100	94.743	Xiphophorus_maculatus