EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8348 bases
Position: chrLWHD01000520.1:21307-29654
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016202	RVT_1	PF00078.27	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016432	-	1908	-	ENSKMAP00000016202	635 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012078's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012078	-	82	44.367	ENSKMAG00000011266	-	61	44.367
ENSKMAG00000012078	-	82	42.907	ENSKMAG00000021728	-	89	42.907
ENSKMAG00000012078	-	96	57.078	ENSKMAG00000011137	-	92	57.078
ENSKMAG00000012078	-	91	49.597	ENSKMAG00000003929	-	85	49.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012078	-	84	36.752	ENSHBUG00000007075	-	88	36.923	Haplochromis_burtoni
ENSKMAG00000012078	-	86	37.645	ENSMAMG00000018686	-	88	37.645	Mastacembelus_armatus
ENSKMAG00000012078	-	86	37.645	ENSMAMG00000018497	-	88	37.645	Mastacembelus_armatus
ENSKMAG00000012078	-	80	38.750	ENSMAMG00000007322	-	91	38.750	Mastacembelus_armatus
ENSKMAG00000012078	-	83	35.866	ENSMALG00000019992	-	85	35.866	Monopterus_albus
ENSKMAG00000012078	-	93	43.810	ENSORLG00000028280	-	91	43.810	Oryzias_latipes
ENSKMAG00000012078	-	59	44.780	ENSORLG00000024204	-	99	44.780	Oryzias_latipes
ENSKMAG00000012078	-	83	47.619	ENSORLG00020007459	-	85	47.619	Oryzias_latipes_hni
ENSKMAG00000012078	-	79	41.093	ENSORLG00020005313	-	90	41.093	Oryzias_latipes_hni
ENSKMAG00000012078	-	92	45.192	ENSORLG00015007379	-	89	45.192	Oryzias_latipes_hsok
ENSKMAG00000012078	-	90	45.208	ENSORLG00015004347	-	74	45.208	Oryzias_latipes_hsok
ENSKMAG00000012078	-	91	41.991	ENSORLG00015007730	-	97	41.991	Oryzias_latipes_hsok
ENSKMAG00000012078	-	89	44.992	ENSORLG00015017597	-	79	44.992	Oryzias_latipes_hsok
ENSKMAG00000012078	-	81	45.910	ENSORLG00015020292	-	86	45.910	Oryzias_latipes_hsok
ENSKMAG00000012078	-	92	33.333	ENSPKIG00000010460	-	90	33.333	Paramormyrops_kingsleyae
ENSKMAG00000012078	-	75	41.068	ENSSDUG00000008761	-	89	40.884	Seriola_dumerili
ENSKMAG00000012078	-	83	47.887	ENSXMAG00000026647	-	94	44.444	Xiphophorus_maculatus
ENSKMAG00000012078	-	85	41.098	ENSXMAG00000023632	-	88	41.098	Xiphophorus_maculatus