EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012130 (Gene tree)
Gene ID: 108242466
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 23511 bases
Position: chrLWHD01000101.1:571256-594766
Accession: 108242466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016328	GTP_EFTU	PF00009.27	2.7e-47	1	1
ENSKMAP00000016287	GTP_EFTU	PF00009.27	2.8e-47	1	1
ENSKMAP00000016287	MMR_HSR1	PF01926.23	3.2e-06	1	1
ENSKMAP00000016287	GTP_EFTU_D2	PF03144.25	1.9e-08	1	1
ENSKMAP00000016328	GTP_EFTU_D3	PF03143.17	1.9e-28	1	1
ENSKMAP00000016287	GTP_EFTU_D3	PF03143.17	1.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016517	-	2576	XM_017427302	ENSKMAP00000016287	699 (aa)	XP_017282791	UPI0007F92183
ENSKMAT00000016558	-	1881	-	ENSKMAP00000016328	626 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012130's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012130	hbs1l	70	39.778	ENSKMAG00000000413	-	94	40.774
ENSKMAG00000012130	hbs1l	70	39.778	ENSKMAG00000016211	EEF1A1	94	40.774
ENSKMAG00000012130	hbs1l	70	36.889	ENSKMAG00000015910	si:dkey-37o8.1	95	37.585
ENSKMAG00000012130	hbs1l	69	39.498	ENSKMAG00000021919	GSPT1	71	40.471
ENSKMAG00000012130	hbs1l	70	39.778	ENSKMAG00000020147	eef1a1b	94	40.547
ENSKMAG00000012130	hbs1l	69	39.498	ENSKMAG00000006311	-	90	36.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012130	hbs1l	99	77.615	ENSG00000112339	HBS1L	100	80.192	Homo_sapiens
ENSKMAG00000012130	hbs1l	93	74.351	ENSAPOG00000013169	hbs1l	97	74.351	Acanthochromis_polyacanthus
ENSKMAG00000012130	hbs1l	99	77.656	ENSAMEG00000009749	HBS1L	99	71.773	Ailuropoda_melanoleuca
ENSKMAG00000012130	hbs1l	87	87.477	ENSACIG00000017087	hbs1l	91	89.493	Amphilophus_citrinellus
ENSKMAG00000012130	hbs1l	100	89.444	ENSAPEG00000008320	hbs1l	100	88.160	Amphiprion_percula
ENSKMAG00000012130	hbs1l	100	89.483	ENSATEG00000004459	hbs1l	100	88.352	Anabas_testudineus
ENSKMAG00000012130	hbs1l	98	70.402	ENSAPLG00000007791	HBS1L	100	69.684	Anas_platyrhynchos
ENSKMAG00000012130	hbs1l	100	70.780	ENSACAG00000010120	HBS1L	100	70.638	Anolis_carolinensis
ENSKMAG00000012130	hbs1l	99	77.022	ENSANAG00000038076	HBS1L	94	85.106	Aotus_nancymaae
ENSKMAG00000012130	hbs1l	100	87.857	ENSACLG00000010469	hbs1l	100	87.857	Astatotilapia_calliptera
ENSKMAG00000012130	hbs1l	100	82.873	ENSAMXG00000004260	hbs1l	97	85.094	Astyanax_mexicanus
ENSKMAG00000012130	hbs1l	98	78.293	ENSBTAG00000020174	HBS1L	100	71.955	Bos_taurus
ENSKMAG00000012130	hbs1l	84	43.423	WBGene00010622	K07A12.4	99	40.030	Caenorhabditis_elegans
ENSKMAG00000012130	hbs1l	99	77.372	ENSCJAG00000007678	HBS1L	93	85.106	Callithrix_jacchus
ENSKMAG00000012130	hbs1l	100	75.725	ENSCAFG00000000226	HBS1L	100	70.438	Canis_familiaris
ENSKMAG00000012130	hbs1l	100	75.725	ENSCAFG00020021904	HBS1L	100	70.438	Canis_lupus_dingo
ENSKMAG00000012130	hbs1l	98	77.922	ENSCHIG00000010299	HBS1L	100	71.955	Capra_hircus
ENSKMAG00000012130	hbs1l	99	76.460	ENSTSYG00000007089	HBS1L	94	80.851	Carlito_syrichta
ENSKMAG00000012130	hbs1l	99	63.000	ENSCPOG00000007015	HBS1L	84	82.979	Cavia_porcellus
ENSKMAG00000012130	hbs1l	99	76.557	ENSCCAG00000033863	HBS1L	99	73.186	Cebus_capucinus
ENSKMAG00000012130	hbs1l	99	77.798	ENSCATG00000043042	HBS1L	100	72.199	Cercocebus_atys
ENSKMAG00000012130	hbs1l	95	76.710	ENSCLAG00000004937	HBS1L	100	70.904	Chinchilla_lanigera
ENSKMAG00000012130	hbs1l	99	77.348	ENSCSAG00000016791	HBS1L	100	71.813	Chlorocebus_sabaeus
ENSKMAG00000012130	hbs1l	97	57.372	ENSCHOG00000001852	HBS1L	86	83.871	Choloepus_hoffmanni
ENSKMAG00000012130	hbs1l	99	77.248	ENSCPBG00000017635	HBS1L	100	71.671	Chrysemys_picta_bellii
ENSKMAG00000012130	hbs1l	99	48.552	ENSCING00000005592	-	99	48.414	Ciona_intestinalis
ENSKMAG00000012130	hbs1l	97	60.331	ENSCSAVG00000002297	-	99	62.963	Ciona_savignyi
ENSKMAG00000012130	hbs1l	99	77.164	ENSCANG00000031208	HBS1L	92	85.106	Colobus_angolensis_palliatus
ENSKMAG00000012130	hbs1l	100	72.419	ENSCGRG00001024531	Hbs1l	100	71.994	Cricetulus_griseus_chok1gshd
ENSKMAG00000012130	hbs1l	100	72.419	ENSCGRG00000017361	Hbs1l	100	71.994	Cricetulus_griseus_crigri
ENSKMAG00000012130	hbs1l	99	87.941	ENSCSEG00000002794	hbs1l	94	85.857	Cynoglossus_semilaevis
ENSKMAG00000012130	hbs1l	100	86.747	ENSCVAG00000001462	hbs1l	100	86.325	Cyprinodon_variegatus
ENSKMAG00000012130	hbs1l	100	84.727	ENSDARG00000036778	hbs1l	100	80.484	Danio_rerio
ENSKMAG00000012130	hbs1l	100	71.733	ENSDORG00000005958	Hbs1l	100	71.449	Dipodomys_ordii
ENSKMAG00000012130	hbs1l	99	46.648	FBgn0042712	HBS1	100	46.722	Drosophila_melanogaster
ENSKMAG00000012130	hbs1l	99	71.245	ENSETEG00000000913	HBS1L	85	83.673	Echinops_telfairi
ENSKMAG00000012130	hbs1l	100	62.888	ENSEBUG00000010759	hbs1l	100	62.338	Eptatretus_burgeri
ENSKMAG00000012130	hbs1l	100	75.725	ENSEASG00005011148	HBS1L	85	86.957	Equus_asinus_asinus
ENSKMAG00000012130	hbs1l	100	75.588	ENSECAG00000004470	HBS1L	85	86.957	Equus_caballus
ENSKMAG00000012130	hbs1l	100	67.701	ENSEEUG00000013582	HBS1L	100	67.655	Erinaceus_europaeus
ENSKMAG00000012130	hbs1l	92	73.819	ENSELUG00000006444	hbs1l	96	74.087	Esox_lucius
ENSKMAG00000012130	hbs1l	99	77.331	ENSFCAG00000001810	HBS1L	95	85.106	Felis_catus
ENSKMAG00000012130	hbs1l	86	76.697	ENSFALG00000011898	HBS1L	100	71.266	Ficedula_albicollis
ENSKMAG00000012130	hbs1l	95	77.509	ENSFDAG00000011841	HBS1L	100	71.246	Fukomys_damarensis
ENSKMAG00000012130	hbs1l	100	87.892	ENSFHEG00000006942	hbs1l	100	87.892	Fundulus_heteroclitus
ENSKMAG00000012130	hbs1l	99	79.000	ENSGMOG00000011843	hbs1l	100	78.745	Gadus_morhua
ENSKMAG00000012130	hbs1l	100	71.004	ENSGALG00000013962	HBS1L	85	85.714	Gallus_gallus
ENSKMAG00000012130	hbs1l	100	90.028	ENSGAFG00000004157	hbs1l	100	90.028	Gambusia_affinis
ENSKMAG00000012130	hbs1l	99	84.637	ENSGACG00000011035	hbs1l	100	87.386	Gasterosteus_aculeatus
ENSKMAG00000012130	hbs1l	99	76.881	ENSGAGG00000002033	HBS1L	100	70.381	Gopherus_agassizii
ENSKMAG00000012130	hbs1l	88	71.403	ENSGGOG00000034956	-	93	82.796	Gorilla_gorilla
ENSKMAG00000012130	hbs1l	100	88.029	ENSHBUG00000013424	hbs1l	100	88.000	Haplochromis_burtoni
ENSKMAG00000012130	hbs1l	96	75.956	ENSHGLG00000000516	HBS1L	100	70.638	Heterocephalus_glaber_female
ENSKMAG00000012130	hbs1l	96	75.956	ENSHGLG00100003550	HBS1L	100	70.638	Heterocephalus_glaber_male
ENSKMAG00000012130	hbs1l	100	82.553	ENSHCOG00000007581	hbs1l	94	81.571	Hippocampus_comes
ENSKMAG00000012130	hbs1l	100	79.030	ENSIPUG00000010748	hbs1l	100	77.603	Ictalurus_punctatus
ENSKMAG00000012130	hbs1l	99	76.740	ENSSTOG00000007551	HBS1L	100	71.530	Ictidomys_tridecemlineatus
ENSKMAG00000012130	hbs1l	99	69.122	ENSJJAG00000017024	-	97	69.176	Jaculus_jaculus
ENSKMAG00000012130	hbs1l	100	56.232	ENSJJAG00000012660	-	100	55.666	Jaculus_jaculus
ENSKMAG00000012130	hbs1l	100	88.714	ENSLBEG00000002784	hbs1l	100	88.714	Labrus_bergylta
ENSKMAG00000012130	hbs1l	78	76.970	ENSLACG00000004528	HBS1L	99	78.279	Latimeria_chalumnae
ENSKMAG00000012130	hbs1l	99	79.558	ENSLOCG00000016221	hbs1l	100	74.126	Lepisosteus_oculatus
ENSKMAG00000012130	hbs1l	100	74.771	ENSLAFG00000007835	HBS1L	85	88.636	Loxodonta_africana
ENSKMAG00000012130	hbs1l	99	77.920	ENSMFAG00000003766	HBS1L	99	74.724	Macaca_fascicularis
ENSKMAG00000012130	hbs1l	99	77.737	ENSMMUG00000004802	HBS1L	97	78.957	Macaca_mulatta
ENSKMAG00000012130	hbs1l	99	77.920	ENSMNEG00000043942	HBS1L	99	74.724	Macaca_nemestrina
ENSKMAG00000012130	hbs1l	99	77.615	ENSMLEG00000043218	HBS1L	97	74.643	Mandrillus_leucophaeus
ENSKMAG00000012130	hbs1l	100	88.300	ENSMAMG00000016498	hbs1l	100	86.648	Mastacembelus_armatus
ENSKMAG00000012130	hbs1l	100	87.857	ENSMZEG00005015575	hbs1l	100	87.857	Maylandia_zebra
ENSKMAG00000012130	hbs1l	87	87.661	ENSMZEG00005024018	-	90	90.244	Maylandia_zebra
ENSKMAG00000012130	hbs1l	99	69.516	ENSMGAG00000013065	HBS1L	99	67.806	Meleagris_gallopavo
ENSKMAG00000012130	hbs1l	100	72.057	ENSMAUG00000001077	Hbs1l	100	71.631	Mesocricetus_auratus
ENSKMAG00000012130	hbs1l	99	66.484	ENSMICG00000030043	-	96	80.645	Microcebus_murinus
ENSKMAG00000012130	hbs1l	99	69.266	ENSMICG00000001533	-	99	69.419	Microcebus_murinus
ENSKMAG00000012130	hbs1l	100	72.136	ENSMOCG00000023038	Hbs1l	100	71.570	Microtus_ochrogaster
ENSKMAG00000012130	hbs1l	97	87.243	ENSMMOG00000015507	hbs1l	100	87.243	Mola_mola
ENSKMAG00000012130	hbs1l	100	70.822	ENSMODG00000017499	HBS1L	100	70.822	Monodelphis_domestica
ENSKMAG00000012130	hbs1l	100	89.189	ENSMALG00000010768	hbs1l	100	89.189	Monopterus_albus
ENSKMAG00000012130	hbs1l	100	71.849	MGP_CAROLIEiJ_G0015162	Hbs1l	85	86.957	Mus_caroli
ENSKMAG00000012130	hbs1l	100	72.152	ENSMUSG00000019977	Hbs1l	100	90.323	Mus_musculus
ENSKMAG00000012130	hbs1l	100	71.849	MGP_PahariEiJ_G0023782	Hbs1l	85	86.957	Mus_pahari
ENSKMAG00000012130	hbs1l	100	71.849	MGP_SPRETEiJ_G0015970	Hbs1l	85	86.957	Mus_spretus
ENSKMAG00000012130	hbs1l	99	77.331	ENSMPUG00000014810	HBS1L	85	87.234	Mustela_putorius_furo
ENSKMAG00000012130	hbs1l	100	71.955	ENSMLUG00000010618	HBS1L	100	71.105	Myotis_lucifugus
ENSKMAG00000012130	hbs1l	100	71.650	ENSNGAG00000015184	Hbs1l	85	86.957	Nannospalax_galili
ENSKMAG00000012130	hbs1l	100	87.661	ENSNBRG00000020095	hbs1l	100	87.571	Neolamprologus_brichardi
ENSKMAG00000012130	hbs1l	99	76.697	ENSNLEG00000014721	HBS1L	93	85.106	Nomascus_leucogenys
ENSKMAG00000012130	hbs1l	82	80.711	ENSMEUG00000003907	HBS1L	81	80.711	Notamacropus_eugenii
ENSKMAG00000012130	hbs1l	83	79.832	ENSOPRG00000013595	HBS1L	71	80.435	Ochotona_princeps
ENSKMAG00000012130	hbs1l	92	82.979	ENSODEG00000008959	HBS1L	100	70.912	Octodon_degus
ENSKMAG00000012130	hbs1l	100	87.857	ENSONIG00000000460	hbs1l	100	87.216	Oreochromis_niloticus
ENSKMAG00000012130	hbs1l	99	76.155	ENSOANG00000002684	-	84	85.106	Ornithorhynchus_anatinus
ENSKMAG00000012130	hbs1l	99	73.297	ENSOCUG00000011619	HBS1L	84	85.106	Oryctolagus_cuniculus
ENSKMAG00000012130	hbs1l	100	86.264	ENSORLG00000016559	hbs1l	100	84.758	Oryzias_latipes
ENSKMAG00000012130	hbs1l	100	86.264	ENSORLG00020003827	hbs1l	100	84.758	Oryzias_latipes_hni
ENSKMAG00000012130	hbs1l	100	85.897	ENSORLG00015023105	hbs1l	100	84.615	Oryzias_latipes_hsok
ENSKMAG00000012130	hbs1l	100	87.963	ENSOMEG00000016715	hbs1l	100	85.185	Oryzias_melastigma
ENSKMAG00000012130	hbs1l	99	77.615	ENSOGAG00000012604	HBS1L	100	72.199	Otolemur_garnettii
ENSKMAG00000012130	hbs1l	98	78.067	ENSOARG00000014798	-	99	72.159	Ovis_aries
ENSKMAG00000012130	hbs1l	98	77.922	ENSOARG00000005671	-	100	71.813	Ovis_aries
ENSKMAG00000012130	hbs1l	99	77.901	ENSPPAG00000029900	HBS1L	100	72.482	Pan_paniscus
ENSKMAG00000012130	hbs1l	99	77.413	ENSPPRG00000005285	HBS1L	95	85.106	Panthera_pardus
ENSKMAG00000012130	hbs1l	99	77.596	ENSPTIG00000015803	HBS1L	95	85.106	Panthera_tigris_altaica
ENSKMAG00000012130	hbs1l	99	77.901	ENSPTRG00000018630	HBS1L	100	72.482	Pan_troglodytes
ENSKMAG00000012130	hbs1l	99	77.798	ENSPANG00000007075	HBS1L	100	72.199	Papio_anubis
ENSKMAG00000012130	hbs1l	98	80.608	ENSPKIG00000023171	hbs1l	100	74.395	Paramormyrops_kingsleyae
ENSKMAG00000012130	hbs1l	80	75.269	ENSPSIG00000016467	HBS1L	97	68.301	Pelodiscus_sinensis
ENSKMAG00000012130	hbs1l	99	81.492	ENSPMGG00000018051	hbs1l	96	89.894	Periophthalmus_magnuspinnatus
ENSKMAG00000012130	hbs1l	100	72.560	ENSPEMG00000014369	Hbs1l	100	71.994	Peromyscus_maniculatus_bairdii
ENSKMAG00000012130	hbs1l	95	69.835	ENSPMAG00000002516	hbs1l	100	62.801	Petromyzon_marinus
ENSKMAG00000012130	hbs1l	100	89.489	ENSPFOG00000021764	hbs1l	100	89.489	Poecilia_formosa
ENSKMAG00000012130	hbs1l	100	89.886	ENSPLAG00000006193	hbs1l	100	89.886	Poecilia_latipinna
ENSKMAG00000012130	hbs1l	100	89.744	ENSPMEG00000000925	hbs1l	100	89.744	Poecilia_mexicana
ENSKMAG00000012130	hbs1l	100	89.174	ENSPREG00000011270	hbs1l	100	89.174	Poecilia_reticulata
ENSKMAG00000012130	hbs1l	99	77.248	ENSPPYG00000017027	HBS1L	100	71.773	Pongo_abelii
ENSKMAG00000012130	hbs1l	99	76.374	ENSPCAG00000007002	HBS1L	79	77.963	Procavia_capensis
ENSKMAG00000012130	hbs1l	95	75.465	ENSPVAG00000015229	HBS1L	85	76.623	Pteropus_vampyrus
ENSKMAG00000012130	hbs1l	100	87.857	ENSPNYG00000013360	hbs1l	100	87.857	Pundamilia_nyererei
ENSKMAG00000012130	hbs1l	100	79.972	ENSPNAG00000026721	hbs1l	100	79.830	Pygocentrus_nattereri
ENSKMAG00000012130	hbs1l	100	72.073	ENSRNOG00000014531	Hbs1l	85	86.957	Rattus_norvegicus
ENSKMAG00000012130	hbs1l	100	76.439	ENSRBIG00000004484	HBS1L	100	72.057	Rhinopithecus_bieti
ENSKMAG00000012130	hbs1l	100	76.439	ENSRROG00000026176	HBS1L	100	71.915	Rhinopithecus_roxellana
ENSKMAG00000012130	hbs1l	70	38.293	YKR084C	-	73	38.479	Saccharomyces_cerevisiae
ENSKMAG00000012130	hbs1l	99	74.842	ENSSBOG00000019696	-	93	85.106	Saimiri_boliviensis_boliviensis
ENSKMAG00000012130	hbs1l	96	68.864	ENSSBOG00000016930	-	98	78.191	Saimiri_boliviensis_boliviensis
ENSKMAG00000012130	hbs1l	100	71.186	ENSSHAG00000013509	HBS1L	100	71.045	Sarcophilus_harrisii
ENSKMAG00000012130	hbs1l	100	78.850	ENSSFOG00015017544	hbs1l	96	75.393	Scleropages_formosus
ENSKMAG00000012130	hbs1l	100	86.667	ENSSMAG00000010621	hbs1l	100	86.000	Scophthalmus_maximus
ENSKMAG00000012130	hbs1l	100	89.047	ENSSDUG00000012974	hbs1l	100	89.047	Seriola_dumerili
ENSKMAG00000012130	hbs1l	100	88.478	ENSSLDG00000004960	hbs1l	99	90.361	Seriola_lalandi_dorsalis
ENSKMAG00000012130	hbs1l	98	70.707	ENSSARG00000006747	HBS1L	100	70.203	Sorex_araneus
ENSKMAG00000012130	hbs1l	95	76.786	ENSSPUG00000012389	HBS1L	84	85.106	Sphenodon_punctatus
ENSKMAG00000012130	hbs1l	96	77.905	ENSSSCG00000004169	HBS1L	100	71.168	Sus_scrofa
ENSKMAG00000012130	hbs1l	99	70.240	ENSTGUG00000011507	HBS1L	84	85.714	Taeniopygia_guttata
ENSKMAG00000012130	hbs1l	100	84.783	ENSTRUG00000016128	hbs1l	89	97.297	Takifugu_rubripes
ENSKMAG00000012130	hbs1l	99	84.593	ENSTNIG00000016320	hbs1l	99	84.451	Tetraodon_nigroviridis
ENSKMAG00000012130	hbs1l	92	88.889	ENSTBEG00000009950	HBS1L	83	88.889	Tupaia_belangeri
ENSKMAG00000012130	hbs1l	100	76.588	ENSTTRG00000003715	HBS1L	99	71.146	Tursiops_truncatus
ENSKMAG00000012130	hbs1l	99	77.514	ENSUAMG00000001064	HBS1L	100	71.570	Ursus_americanus
ENSKMAG00000012130	hbs1l	99	77.331	ENSUMAG00000024395	HBS1L	99	86.486	Ursus_maritimus
ENSKMAG00000012130	hbs1l	99	77.355	ENSVPAG00000006280	HBS1L	86	85.106	Vicugna_pacos
ENSKMAG00000012130	hbs1l	100	71.570	ENSVVUG00000000295	HBS1L	100	70.721	Vulpes_vulpes
ENSKMAG00000012130	hbs1l	100	71.245	ENSXETG00000003726	hbs1l	100	71.817	Xenopus_tropicalis
ENSKMAG00000012130	hbs1l	99	88.160	ENSXCOG00000005323	hbs1l	100	87.874	Xiphophorus_couchianus
ENSKMAG00000012130	hbs1l	100	90.598	ENSXMAG00000004359	hbs1l	100	90.598	Xiphophorus_maculatus