EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012142 (Gene tree)
Gene ID: 108231467
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3504 bases
Position: chrLWHD01000012.1:1456835-1460338
Accession: 108231467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016262	dsrm	PF00035.26	2.2e-35	1	2
ENSKMAP00000016262	dsrm	PF00035.26	2.2e-35	2	2
ENSKMAP00000016262	DND1_DSRM	PF14709.7	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016492	-	1215	XM_017408529	ENSKMAP00000016262	345 (aa)	XP_017264018	UPI0007F8724C

Gene Model

Click here to download ENSKMAG00000012142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012142	tarbp2	92	44.969	ENSKMAG00000016206	prkra	91	44.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012142	tarbp2	100	64.754	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSKMAG00000012142	tarbp2	100	94.493	ENSAPOG00000019892	tarbp2	100	94.493	Acanthochromis_polyacanthus
ENSKMAG00000012142	tarbp2	100	65.301	ENSAMEG00000012601	TARBP2	100	65.301	Ailuropoda_melanoleuca
ENSKMAG00000012142	tarbp2	100	91.304	ENSACIG00000016780	tarbp2	100	91.304	Amphilophus_citrinellus
ENSKMAG00000012142	tarbp2	100	94.493	ENSAOCG00000005201	tarbp2	100	94.493	Amphiprion_ocellaris
ENSKMAG00000012142	tarbp2	100	94.493	ENSAPEG00000008376	tarbp2	100	94.493	Amphiprion_percula
ENSKMAG00000012142	tarbp2	100	93.043	ENSATEG00000025012	tarbp2	100	93.043	Anabas_testudineus
ENSKMAG00000012142	tarbp2	96	70.402	ENSACAG00000001100	TARBP2	96	70.402	Anolis_carolinensis
ENSKMAG00000012142	tarbp2	100	64.754	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSKMAG00000012142	tarbp2	98	89.971	ENSACLG00000018569	tarbp2	98	89.971	Astatotilapia_calliptera
ENSKMAG00000012142	tarbp2	100	85.260	ENSAMXG00000016665	tarbp2	100	85.549	Astyanax_mexicanus
ENSKMAG00000012142	tarbp2	100	65.574	ENSBTAG00000000435	TARBP2	100	65.574	Bos_taurus
ENSKMAG00000012142	tarbp2	100	64.754	ENSCJAG00000018668	TARBP2	100	65.123	Callithrix_jacchus
ENSKMAG00000012142	tarbp2	100	68.012	ENSCAFG00000006874	TARBP2	100	68.012	Canis_familiaris
ENSKMAG00000012142	tarbp2	100	65.027	ENSCAFG00020020735	TARBP2	100	66.957	Canis_lupus_dingo
ENSKMAG00000012142	tarbp2	100	65.135	ENSCHIG00000026017	TARBP2	100	65.229	Capra_hircus
ENSKMAG00000012142	tarbp2	100	65.847	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSKMAG00000012142	tarbp2	65	69.333	ENSCAPG00000008981	TARBP2	100	69.333	Cavia_aperea
ENSKMAG00000012142	tarbp2	100	65.574	ENSCPOG00000001009	TARBP2	100	65.489	Cavia_porcellus
ENSKMAG00000012142	tarbp2	95	67.049	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSKMAG00000012142	tarbp2	100	64.481	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSKMAG00000012142	tarbp2	100	65.027	ENSCLAG00000009175	TARBP2	100	65.217	Chinchilla_lanigera
ENSKMAG00000012142	tarbp2	100	64.481	ENSCSAG00000005479	TARBP2	100	64.578	Chlorocebus_sabaeus
ENSKMAG00000012142	tarbp2	100	68.975	ENSCPBG00000000654	TARBP2	100	71.176	Chrysemys_picta_bellii
ENSKMAG00000012142	tarbp2	100	64.754	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSKMAG00000012142	tarbp2	100	64.658	ENSCGRG00001011856	TARBP2	100	64.932	Cricetulus_griseus_chok1gshd
ENSKMAG00000012142	tarbp2	100	64.658	ENSCGRG00000009088	TARBP2	100	66.667	Cricetulus_griseus_crigri
ENSKMAG00000012142	tarbp2	100	90.145	ENSCSEG00000010631	tarbp2	100	90.145	Cynoglossus_semilaevis
ENSKMAG00000012142	tarbp2	100	92.754	ENSCVAG00000009832	tarbp2	100	92.754	Cyprinodon_variegatus
ENSKMAG00000012142	tarbp2	100	82.184	ENSDARG00000070471	tarbp2	100	82.759	Danio_rerio
ENSKMAG00000012142	tarbp2	100	65.301	ENSDNOG00000002144	TARBP2	100	65.027	Dasypus_novemcinctus
ENSKMAG00000012142	tarbp2	63	70.136	ENSDORG00000001390	Tarbp2	91	70.136	Dipodomys_ordii
ENSKMAG00000012142	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSKMAG00000012142	tarbp2	95	59.146	ENSEBUG00000002377	tarbp2	98	60.061	Eptatretus_burgeri
ENSKMAG00000012142	tarbp2	100	65.847	ENSEASG00005010030	TARBP2	100	66.120	Equus_asinus_asinus
ENSKMAG00000012142	tarbp2	100	68.195	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSKMAG00000012142	tarbp2	84	62.500	ENSEEUG00000001128	-	99	62.500	Erinaceus_europaeus
ENSKMAG00000012142	tarbp2	100	86.207	ENSELUG00000010642	tarbp2	100	87.931	Esox_lucius
ENSKMAG00000012142	tarbp2	100	65.574	ENSFCAG00000007757	TARBP2	100	65.574	Felis_catus
ENSKMAG00000012142	tarbp2	100	65.027	ENSFDAG00000011932	TARBP2	100	68.852	Fukomys_damarensis
ENSKMAG00000012142	tarbp2	94	92.901	ENSFHEG00000016118	tarbp2	100	92.901	Fundulus_heteroclitus
ENSKMAG00000012142	tarbp2	100	86.167	ENSGMOG00000001290	tarbp2	100	86.167	Gadus_morhua
ENSKMAG00000012142	tarbp2	63	71.689	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSKMAG00000012142	tarbp2	100	92.464	ENSGAFG00000013341	tarbp2	100	92.464	Gambusia_affinis
ENSKMAG00000012142	tarbp2	100	88.732	ENSGACG00000006645	tarbp2	100	89.014	Gasterosteus_aculeatus
ENSKMAG00000012142	tarbp2	100	69.529	ENSGAGG00000021169	TARBP2	100	69.252	Gopherus_agassizii
ENSKMAG00000012142	tarbp2	95	67.049	ENSGGOG00000012637	TARBP2	72	92.982	Gorilla_gorilla
ENSKMAG00000012142	tarbp2	100	91.884	ENSHBUG00000018639	tarbp2	100	91.884	Haplochromis_burtoni
ENSKMAG00000012142	tarbp2	100	64.946	ENSHGLG00000001284	TARBP2	100	65.847	Heterocephalus_glaber_female
ENSKMAG00000012142	tarbp2	100	64.946	ENSHGLG00100011274	TARBP2	100	65.847	Heterocephalus_glaber_male
ENSKMAG00000012142	tarbp2	100	86.087	ENSHCOG00000001027	tarbp2	100	86.087	Hippocampus_comes
ENSKMAG00000012142	tarbp2	100	82.857	ENSIPUG00000023701	tarbp2	100	82.857	Ictalurus_punctatus
ENSKMAG00000012142	tarbp2	95	67.622	ENSSTOG00000003678	TARBP2	100	68.033	Ictidomys_tridecemlineatus
ENSKMAG00000012142	tarbp2	100	92.090	ENSLBEG00000015027	tarbp2	100	92.090	Labrus_bergylta
ENSKMAG00000012142	tarbp2	95	65.549	ENSLACG00000007087	TARBP2	95	66.159	Latimeria_chalumnae
ENSKMAG00000012142	tarbp2	100	82.184	ENSLOCG00000005711	tarbp2	100	82.184	Lepisosteus_oculatus
ENSKMAG00000012142	tarbp2	71	63.359	ENSLAFG00000002620	TARBP2	93	62.595	Loxodonta_africana
ENSKMAG00000012142	tarbp2	100	64.481	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSKMAG00000012142	tarbp2	100	64.754	ENSMMUG00000018492	TARBP2	100	64.850	Macaca_mulatta
ENSKMAG00000012142	tarbp2	100	64.481	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSKMAG00000012142	tarbp2	100	64.481	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSKMAG00000012142	tarbp2	95	90.520	ENSMAMG00000010272	tarbp2	97	89.474	Mastacembelus_armatus
ENSKMAG00000012142	tarbp2	100	92.174	ENSMZEG00005006895	tarbp2	100	92.174	Maylandia_zebra
ENSKMAG00000012142	tarbp2	100	64.384	ENSMAUG00000019805	Tarbp2	100	64.658	Mesocricetus_auratus
ENSKMAG00000012142	tarbp2	94	68.116	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSKMAG00000012142	tarbp2	100	65.205	ENSMOCG00000003691	Tarbp2	100	65.205	Microtus_ochrogaster
ENSKMAG00000012142	tarbp2	94	90.303	ENSMMOG00000010374	tarbp2	100	90.303	Mola_mola
ENSKMAG00000012142	tarbp2	100	91.594	ENSMALG00000009773	tarbp2	100	91.594	Monopterus_albus
ENSKMAG00000012142	tarbp2	100	64.658	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSKMAG00000012142	tarbp2	100	64.658	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSKMAG00000012142	tarbp2	100	64.658	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSKMAG00000012142	tarbp2	100	64.658	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSKMAG00000012142	tarbp2	100	65.301	ENSMPUG00000005944	TARBP2	100	65.301	Mustela_putorius_furo
ENSKMAG00000012142	tarbp2	100	65.847	ENSMLUG00000010035	TARBP2	100	66.667	Myotis_lucifugus
ENSKMAG00000012142	tarbp2	100	64.754	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSKMAG00000012142	tarbp2	100	69.275	ENSMEUG00000001916	TARBP2	100	69.275	Notamacropus_eugenii
ENSKMAG00000012142	tarbp2	65	71.556	ENSOPRG00000011397	TARBP2	100	71.556	Ochotona_princeps
ENSKMAG00000012142	tarbp2	60	70.354	ENSODEG00000013413	TARBP2	100	70.614	Octodon_degus
ENSKMAG00000012142	tarbp2	95	87.931	ENSONIG00000005115	tarbp2	96	87.931	Oreochromis_niloticus
ENSKMAG00000012142	tarbp2	100	66.757	ENSOCUG00000005700	TARBP2	100	66.757	Oryctolagus_cuniculus
ENSKMAG00000012142	tarbp2	100	91.014	ENSORLG00000005209	tarbp2	100	91.014	Oryzias_latipes
ENSKMAG00000012142	tarbp2	100	91.014	ENSORLG00020017755	tarbp2	100	91.014	Oryzias_latipes_hni
ENSKMAG00000012142	tarbp2	100	91.014	ENSORLG00015013237	tarbp2	100	91.014	Oryzias_latipes_hsok
ENSKMAG00000012142	tarbp2	100	91.884	ENSOMEG00000018860	tarbp2	100	91.884	Oryzias_melastigma
ENSKMAG00000012142	tarbp2	100	64.481	ENSOGAG00000001744	TARBP2	100	65.574	Otolemur_garnettii
ENSKMAG00000012142	tarbp2	100	65.301	ENSOARG00000016437	TARBP2	100	65.301	Ovis_aries
ENSKMAG00000012142	tarbp2	100	64.754	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSKMAG00000012142	tarbp2	100	65.574	ENSPPRG00000000189	TARBP2	100	65.574	Panthera_pardus
ENSKMAG00000012142	tarbp2	100	67.036	ENSPTIG00000007859	TARBP2	100	67.036	Panthera_tigris_altaica
ENSKMAG00000012142	tarbp2	100	64.754	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSKMAG00000012142	tarbp2	100	64.481	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSKMAG00000012142	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSKMAG00000012142	tarbp2	100	91.884	ENSPMGG00000006497	tarbp2	100	91.884	Periophthalmus_magnuspinnatus
ENSKMAG00000012142	tarbp2	100	63.836	ENSPEMG00000014285	Tarbp2	100	63.836	Peromyscus_maniculatus_bairdii
ENSKMAG00000012142	tarbp2	92	61.250	ENSPMAG00000000105	tarbp2	99	61.250	Petromyzon_marinus
ENSKMAG00000012142	tarbp2	100	69.275	ENSPCIG00000006672	TARBP2	92	69.275	Phascolarctos_cinereus
ENSKMAG00000012142	tarbp2	100	93.623	ENSPFOG00000007586	tarbp2	100	93.623	Poecilia_formosa
ENSKMAG00000012142	tarbp2	100	93.043	ENSPLAG00000017659	tarbp2	100	93.043	Poecilia_latipinna
ENSKMAG00000012142	tarbp2	100	93.623	ENSPMEG00000007775	tarbp2	100	93.623	Poecilia_mexicana
ENSKMAG00000012142	tarbp2	100	92.754	ENSPREG00000007815	tarbp2	100	92.754	Poecilia_reticulata
ENSKMAG00000012142	tarbp2	95	66.667	ENSPPYG00000004583	TARBP2	95	67.069	Pongo_abelii
ENSKMAG00000012142	tarbp2	78	62.887	ENSPCAG00000005352	TARBP2	60	71.041	Procavia_capensis
ENSKMAG00000012142	tarbp2	100	65.301	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSKMAG00000012142	tarbp2	100	65.027	ENSPVAG00000012286	TARBP2	100	65.027	Pteropus_vampyrus
ENSKMAG00000012142	tarbp2	100	91.884	ENSPNYG00000014125	tarbp2	100	91.884	Pundamilia_nyererei
ENSKMAG00000012142	tarbp2	100	85.260	ENSPNAG00000011128	tarbp2	100	85.838	Pygocentrus_nattereri
ENSKMAG00000012142	tarbp2	100	64.658	ENSRNOG00000042355	Tarbp2	100	64.481	Rattus_norvegicus
ENSKMAG00000012142	tarbp2	100	64.481	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSKMAG00000012142	tarbp2	100	64.481	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSKMAG00000012142	tarbp2	100	64.754	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSKMAG00000012142	tarbp2	99	66.942	ENSSHAG00000007064	TARBP2	100	71.914	Sarcophilus_harrisii
ENSKMAG00000012142	tarbp2	100	80.110	ENSSFOG00015010784	tarbp2	100	81.006	Scleropages_formosus
ENSKMAG00000012142	tarbp2	100	92.023	ENSSMAG00000012769	tarbp2	100	92.023	Scophthalmus_maximus
ENSKMAG00000012142	tarbp2	100	94.783	ENSSDUG00000018818	tarbp2	100	94.783	Seriola_dumerili
ENSKMAG00000012142	tarbp2	100	94.203	ENSSLDG00000001835	tarbp2	100	94.203	Seriola_lalandi_dorsalis
ENSKMAG00000012142	tarbp2	76	67.164	ENSSARG00000001010	TARBP2	72	67.164	Sorex_araneus
ENSKMAG00000012142	tarbp2	97	51.929	ENSSPUG00000005895	TARBP2	96	53.116	Sphenodon_punctatus
ENSKMAG00000012142	tarbp2	100	94.783	ENSSPAG00000022797	tarbp2	100	94.783	Stegastes_partitus
ENSKMAG00000012142	tarbp2	100	65.301	ENSSSCG00000000276	TARBP2	100	67.826	Sus_scrofa
ENSKMAG00000012142	tarbp2	71	57.031	ENSTGUG00000017031	TARBP2	100	57.031	Taeniopygia_guttata
ENSKMAG00000012142	tarbp2	100	91.884	ENSTRUG00000014379	tarbp2	100	91.884	Takifugu_rubripes
ENSKMAG00000012142	tarbp2	100	91.884	ENSTNIG00000007065	tarbp2	100	91.884	Tetraodon_nigroviridis
ENSKMAG00000012142	tarbp2	100	65.847	ENSTTRG00000017177	TARBP2	100	65.574	Tursiops_truncatus
ENSKMAG00000012142	tarbp2	100	65.574	ENSUAMG00000009011	TARBP2	100	65.574	Ursus_americanus
ENSKMAG00000012142	tarbp2	100	65.027	ENSUMAG00000010461	TARBP2	100	65.027	Ursus_maritimus
ENSKMAG00000012142	tarbp2	100	65.027	ENSVVUG00000028150	TARBP2	100	66.957	Vulpes_vulpes
ENSKMAG00000012142	tarbp2	97	70.930	ENSXETG00000012644	tarbp2	97	70.930	Xenopus_tropicalis
ENSKMAG00000012142	tarbp2	100	93.623	ENSXMAG00000017836	tarbp2	100	93.623	Xiphophorus_maculatus