EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012143 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3090 bases
Position: chrLWHD01000520.1:165781-168870
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016263	LSM	PF01423.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016494	-	366	-	ENSKMAP00000016263	121 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012143	oscp1a	61	33.784	ENSKMAG00000005987	snrpd1	82	31.633
ENSKMAG00000012143	oscp1a	58	32.877	ENSKMAG00000014909	si:ch73-14h10.2	77	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012143	oscp1a	98	63.559	ENSG00000181817	LSM10	96	63.559	Homo_sapiens
ENSKMAG00000012143	oscp1a	99	66.942	ENSAMEG00000019854	LSM10	98	66.942	Ailuropoda_melanoleuca
ENSKMAG00000012143	oscp1a	99	84.167	ENSACIG00000015420	oscp1a	79	84.167	Amphilophus_citrinellus
ENSKMAG00000012143	oscp1a	92	80.180	ENSAOCG00000015607	LSM10	86	80.180	Amphiprion_ocellaris
ENSKMAG00000012143	oscp1a	100	85.950	ENSAOCG00000014654	-	100	85.950	Amphiprion_ocellaris
ENSKMAG00000012143	oscp1a	100	85.950	ENSAOCG00000015618	LSM10	100	85.950	Amphiprion_ocellaris
ENSKMAG00000012143	oscp1a	92	80.180	ENSAPEG00000021851	LSM10	86	80.180	Amphiprion_percula
ENSKMAG00000012143	oscp1a	100	85.950	ENSAPEG00000021845	-	100	85.950	Amphiprion_percula
ENSKMAG00000012143	oscp1a	94	85.965	ENSATEG00000006310	oscp1a	84	85.965	Anabas_testudineus
ENSKMAG00000012143	oscp1a	95	59.130	ENSACAG00000001231	LSM10	93	59.130	Anolis_carolinensis
ENSKMAG00000012143	oscp1a	98	61.864	ENSANAG00000031489	-	97	61.864	Aotus_nancymaae
ENSKMAG00000012143	oscp1a	98	63.559	ENSANAG00000018759	-	96	63.559	Aotus_nancymaae
ENSKMAG00000012143	oscp1a	100	87.603	ENSACLG00000004728	oscp1a	98	87.603	Astatotilapia_calliptera
ENSKMAG00000012143	oscp1a	100	74.380	ENSAMXG00000025301	oscp1a	100	74.380	Astyanax_mexicanus
ENSKMAG00000012143	oscp1a	98	63.559	ENSBTAG00000024096	LSM10	97	63.559	Bos_taurus
ENSKMAG00000012143	oscp1a	98	64.407	ENSCJAG00000044880	LSM10	96	64.407	Callithrix_jacchus
ENSKMAG00000012143	oscp1a	99	66.116	ENSCAFG00000003382	LSM10	98	66.116	Canis_familiaris
ENSKMAG00000012143	oscp1a	99	66.116	ENSCAFG00020008920	LSM10	98	66.116	Canis_lupus_dingo
ENSKMAG00000012143	oscp1a	98	63.559	ENSCHIG00000009398	LSM10	97	63.559	Capra_hircus
ENSKMAG00000012143	oscp1a	98	65.254	ENSCAPG00000012567	LSM10	96	65.254	Cavia_aperea
ENSKMAG00000012143	oscp1a	98	65.254	ENSCPOG00000039302	LSM10	96	65.254	Cavia_porcellus
ENSKMAG00000012143	oscp1a	98	61.017	ENSCCAG00000008378	-	96	61.017	Cebus_capucinus
ENSKMAG00000012143	oscp1a	98	63.559	ENSCCAG00000018913	-	96	63.559	Cebus_capucinus
ENSKMAG00000012143	oscp1a	96	63.793	ENSCATG00000006589	LSM10	94	63.793	Cercocebus_atys
ENSKMAG00000012143	oscp1a	98	64.407	ENSCLAG00000008633	LSM10	96	64.407	Chinchilla_lanigera
ENSKMAG00000012143	oscp1a	96	63.793	ENSCSAG00000000134	LSM10	94	63.793	Chlorocebus_sabaeus
ENSKMAG00000012143	oscp1a	98	61.667	ENSCHOG00000008615	LSM10	96	61.667	Choloepus_hoffmanni
ENSKMAG00000012143	oscp1a	82	32.323	ENSCSAVG00000001896	-	85	32.323	Ciona_savignyi
ENSKMAG00000012143	oscp1a	96	63.793	ENSCANG00000019928	LSM10	94	63.793	Colobus_angolensis_palliatus
ENSKMAG00000012143	oscp1a	96	64.655	ENSCGRG00001004317	-	95	64.655	Cricetulus_griseus_chok1gshd
ENSKMAG00000012143	oscp1a	94	58.621	ENSCGRG00001022673	-	93	58.621	Cricetulus_griseus_chok1gshd
ENSKMAG00000012143	oscp1a	94	58.621	ENSCGRG00000015514	-	93	58.621	Cricetulus_griseus_crigri
ENSKMAG00000012143	oscp1a	96	64.655	ENSCGRG00000014935	-	95	64.655	Cricetulus_griseus_crigri
ENSKMAG00000012143	oscp1a	99	86.667	ENSCSEG00000010374	oscp1a	81	86.667	Cynoglossus_semilaevis
ENSKMAG00000012143	oscp1a	98	81.356	ENSCVAG00000001536	oscp1a	89	81.356	Cyprinodon_variegatus
ENSKMAG00000012143	oscp1a	69	74.699	ENSDARG00000109563	CABZ01074453.1	96	74.699	Danio_rerio
ENSKMAG00000012143	oscp1a	98	75.424	ENSDARG00000101222	oscp1a	98	75.424	Danio_rerio
ENSKMAG00000012143	oscp1a	98	64.407	ENSDNOG00000036662	LSM10	96	64.407	Dasypus_novemcinctus
ENSKMAG00000012143	oscp1a	96	65.517	ENSDORG00000007579	Lsm10	94	65.517	Dipodomys_ordii
ENSKMAG00000012143	oscp1a	96	64.655	ENSETEG00000005703	LSM10	94	64.655	Echinops_telfairi
ENSKMAG00000012143	oscp1a	93	50.893	ENSEBUG00000001312	oscp1a	92	50.893	Eptatretus_burgeri
ENSKMAG00000012143	oscp1a	99	66.116	ENSEASG00005012194	LSM10	98	66.116	Equus_asinus_asinus
ENSKMAG00000012143	oscp1a	99	65.289	ENSECAG00000005071	LSM10	98	65.289	Equus_caballus
ENSKMAG00000012143	oscp1a	99	66.116	ENSEEUG00000012032	LSM10	98	66.116	Erinaceus_europaeus
ENSKMAG00000012143	oscp1a	98	81.356	ENSELUG00000007452	oscp1a	97	81.356	Esox_lucius
ENSKMAG00000012143	oscp1a	95	63.478	ENSFALG00000000851	LSM10	93	63.478	Ficedula_albicollis
ENSKMAG00000012143	oscp1a	98	65.254	ENSFDAG00000021056	LSM10	96	65.254	Fukomys_damarensis
ENSKMAG00000012143	oscp1a	94	82.609	ENSFHEG00000001058	oscp1a	99	82.609	Fundulus_heteroclitus
ENSKMAG00000012143	oscp1a	97	68.376	ENSGMOG00000019832	oscp1a	98	68.376	Gadus_morhua
ENSKMAG00000012143	oscp1a	97	63.248	ENSGALG00000002127	LSM10	95	63.248	Gallus_gallus
ENSKMAG00000012143	oscp1a	88	74.766	ENSGAFG00000016445	oscp1a	87	74.766	Gambusia_affinis
ENSKMAG00000012143	oscp1a	99	88.333	ENSGACG00000002329	oscp1a	98	88.333	Gasterosteus_aculeatus
ENSKMAG00000012143	oscp1a	96	65.517	ENSGAGG00000024848	LSM10	94	65.517	Gopherus_agassizii
ENSKMAG00000012143	oscp1a	98	63.559	ENSGGOG00000003556	LSM10	96	63.559	Gorilla_gorilla
ENSKMAG00000012143	oscp1a	100	87.603	ENSHBUG00000001722	oscp1a	98	87.603	Haplochromis_burtoni
ENSKMAG00000012143	oscp1a	98	64.407	ENSHGLG00000011625	LSM10	96	64.407	Heterocephalus_glaber_female
ENSKMAG00000012143	oscp1a	98	64.407	ENSHGLG00100001769	LSM10	96	64.407	Heterocephalus_glaber_male
ENSKMAG00000012143	oscp1a	89	73.148	ENSIPUG00000005808	oscp1a	94	73.148	Ictalurus_punctatus
ENSKMAG00000012143	oscp1a	99	66.116	ENSSTOG00000000606	LSM10	98	66.116	Ictidomys_tridecemlineatus
ENSKMAG00000012143	oscp1a	94	83.333	ENSLBEG00000017764	oscp1a	93	83.333	Labrus_bergylta
ENSKMAG00000012143	oscp1a	99	61.157	ENSLACG00000015904	LSM10	93	61.157	Latimeria_chalumnae
ENSKMAG00000012143	oscp1a	99	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSKMAG00000012143	oscp1a	96	64.655	ENSLAFG00000009600	LSM10	94	64.655	Loxodonta_africana
ENSKMAG00000012143	oscp1a	96	63.793	ENSMFAG00000009115	LSM10	94	63.793	Macaca_fascicularis
ENSKMAG00000012143	oscp1a	96	63.793	ENSMMUG00000017338	LSM10	94	63.793	Macaca_mulatta
ENSKMAG00000012143	oscp1a	96	63.793	ENSMNEG00000020023	LSM10	94	63.793	Macaca_nemestrina
ENSKMAG00000012143	oscp1a	96	63.793	ENSMLEG00000025150	LSM10	94	63.793	Mandrillus_leucophaeus
ENSKMAG00000012143	oscp1a	99	84.167	ENSMAMG00000004427	oscp1a	98	84.167	Mastacembelus_armatus
ENSKMAG00000012143	oscp1a	100	87.603	ENSMZEG00005026307	oscp1a	98	87.603	Maylandia_zebra
ENSKMAG00000012143	oscp1a	97	62.393	ENSMGAG00000015707	LSM10	95	62.393	Meleagris_gallopavo
ENSKMAG00000012143	oscp1a	96	65.517	ENSMAUG00000016624	Lsm10	95	65.517	Mesocricetus_auratus
ENSKMAG00000012143	oscp1a	96	64.655	ENSMOCG00000021943	Lsm10	95	64.655	Microtus_ochrogaster
ENSKMAG00000012143	oscp1a	94	89.474	ENSMMOG00000013597	oscp1a	85	89.474	Mola_mola
ENSKMAG00000012143	oscp1a	98	69.492	ENSMODG00000023328	LSM10	96	69.492	Monodelphis_domestica
ENSKMAG00000012143	oscp1a	96	65.517	MGP_CAROLIEiJ_G0026467	Lsm10	96	68.539	Mus_caroli
ENSKMAG00000012143	oscp1a	96	64.655	ENSMUSG00000050188	Lsm10	96	67.416	Mus_musculus
ENSKMAG00000012143	oscp1a	96	64.655	MGP_PahariEiJ_G0028798	Lsm10	96	67.416	Mus_pahari
ENSKMAG00000012143	oscp1a	96	64.655	MGP_SPRETEiJ_G0027446	Lsm10	96	67.416	Mus_spretus
ENSKMAG00000012143	oscp1a	99	66.116	ENSMPUG00000018593	LSM10	98	66.116	Mustela_putorius_furo
ENSKMAG00000012143	oscp1a	99	66.942	ENSMLUG00000023895	LSM10	98	66.942	Myotis_lucifugus
ENSKMAG00000012143	oscp1a	96	63.793	ENSNGAG00000015011	Lsm10	94	63.793	Nannospalax_galili
ENSKMAG00000012143	oscp1a	99	86.667	ENSNBRG00000014306	oscp1a	98	86.667	Neolamprologus_brichardi
ENSKMAG00000012143	oscp1a	98	63.559	ENSNLEG00000033754	LSM10	96	63.559	Nomascus_leucogenys
ENSKMAG00000012143	oscp1a	98	69.492	ENSMEUG00000006313	LSM10	96	69.492	Notamacropus_eugenii
ENSKMAG00000012143	oscp1a	96	65.517	ENSOPRG00000001699	LSM10	94	65.517	Ochotona_princeps
ENSKMAG00000012143	oscp1a	98	64.407	ENSODEG00000019161	LSM10	96	64.407	Octodon_degus
ENSKMAG00000012143	oscp1a	99	86.667	ENSONIG00000020904	oscp1a	98	86.667	Oreochromis_niloticus
ENSKMAG00000012143	oscp1a	99	66.942	ENSOANG00000002066	LSM10	98	66.942	Ornithorhynchus_anatinus
ENSKMAG00000012143	oscp1a	98	64.407	ENSOCUG00000005333	LSM10	96	64.407	Oryctolagus_cuniculus
ENSKMAG00000012143	oscp1a	100	82.645	ENSORLG00000009504	oscp1a	100	82.645	Oryzias_latipes
ENSKMAG00000012143	oscp1a	100	82.645	ENSORLG00020016201	oscp1a	100	82.645	Oryzias_latipes_hni
ENSKMAG00000012143	oscp1a	100	80.992	ENSORLG00015007794	oscp1a	100	80.992	Oryzias_latipes_hsok
ENSKMAG00000012143	oscp1a	99	65.289	ENSOGAG00000002653	LSM10	98	65.289	Otolemur_garnettii
ENSKMAG00000012143	oscp1a	98	63.559	ENSOARG00000009596	LSM10	97	63.559	Ovis_aries
ENSKMAG00000012143	oscp1a	98	63.559	ENSPPAG00000023465	LSM10	96	63.559	Pan_paniscus
ENSKMAG00000012143	oscp1a	99	65.289	ENSPPRG00000014619	LSM10	98	65.289	Panthera_pardus
ENSKMAG00000012143	oscp1a	99	65.289	ENSPTIG00000004613	LSM10	98	65.289	Panthera_tigris_altaica
ENSKMAG00000012143	oscp1a	98	63.559	ENSPTRG00000000539	LSM10	96	63.559	Pan_troglodytes
ENSKMAG00000012143	oscp1a	96	63.793	ENSPANG00000023172	LSM10	94	63.793	Papio_anubis
ENSKMAG00000012143	oscp1a	98	75.630	ENSPKIG00000003728	oscp1a	96	75.630	Paramormyrops_kingsleyae
ENSKMAG00000012143	oscp1a	96	64.655	ENSPSIG00000000590	LSM10	94	64.655	Pelodiscus_sinensis
ENSKMAG00000012143	oscp1a	63	72.368	ENSPMGG00000015718	oscp1a	99	72.368	Periophthalmus_magnuspinnatus
ENSKMAG00000012143	oscp1a	83	70.297	ENSPCIG00000014865	LSM10	74	70.297	Phascolarctos_cinereus
ENSKMAG00000012143	oscp1a	94	78.070	ENSPFOG00000020490	oscp1a	97	78.070	Poecilia_formosa
ENSKMAG00000012143	oscp1a	99	75.000	ENSPLAG00000016537	oscp1a	92	75.000	Poecilia_latipinna
ENSKMAG00000012143	oscp1a	93	76.106	ENSPMEG00000000174	oscp1a	98	76.106	Poecilia_mexicana
ENSKMAG00000012143	oscp1a	99	75.833	ENSPREG00000009899	oscp1a	92	75.833	Poecilia_reticulata
ENSKMAG00000012143	oscp1a	98	63.559	ENSPPYG00000001539	LSM10	96	63.559	Pongo_abelii
ENSKMAG00000012143	oscp1a	98	65.254	ENSPCAG00000002520	LSM10	97	65.254	Procavia_capensis
ENSKMAG00000012143	oscp1a	98	64.407	ENSPVAG00000008644	LSM10	96	64.407	Pteropus_vampyrus
ENSKMAG00000012143	oscp1a	100	87.603	ENSPNYG00000003138	oscp1a	98	87.603	Pundamilia_nyererei
ENSKMAG00000012143	oscp1a	100	78.512	ENSPNAG00000028829	oscp1a	100	78.512	Pygocentrus_nattereri
ENSKMAG00000012143	oscp1a	96	63.793	ENSRNOG00000025716	Lsm10	95	63.793	Rattus_norvegicus
ENSKMAG00000012143	oscp1a	96	63.793	ENSRBIG00000001561	LSM10	94	63.793	Rhinopithecus_bieti
ENSKMAG00000012143	oscp1a	96	63.793	ENSRROG00000011414	LSM10	94	63.793	Rhinopithecus_roxellana
ENSKMAG00000012143	oscp1a	98	63.559	ENSSBOG00000036413	-	96	63.559	Saimiri_boliviensis_boliviensis
ENSKMAG00000012143	oscp1a	98	69.492	ENSSHAG00000018056	LSM10	96	69.492	Sarcophilus_harrisii
ENSKMAG00000012143	oscp1a	98	72.881	ENSSFOG00015019954	lsm10	97	72.881	Scleropages_formosus
ENSKMAG00000012143	oscp1a	97	88.889	ENSSMAG00000001297	oscp1a	100	88.889	Scophthalmus_maximus
ENSKMAG00000012143	oscp1a	98	79.661	ENSSDUG00000007090	oscp1a	96	79.661	Seriola_dumerili
ENSKMAG00000012143	oscp1a	100	77.686	ENSSLDG00000000800	oscp1a	100	77.686	Seriola_lalandi_dorsalis
ENSKMAG00000012143	oscp1a	87	66.667	ENSSARG00000004211	LSM10	96	63.333	Sorex_araneus
ENSKMAG00000012143	oscp1a	100	85.950	ENSSPAG00000009229	oscp1a	100	85.950	Stegastes_partitus
ENSKMAG00000012143	oscp1a	98	63.559	ENSSSCG00000038916	LSM10	96	63.559	Sus_scrofa
ENSKMAG00000012143	oscp1a	96	62.069	ENSTGUG00000001602	-	95	62.069	Taeniopygia_guttata
ENSKMAG00000012143	oscp1a	96	62.931	ENSTGUG00000001600	-	95	62.931	Taeniopygia_guttata
ENSKMAG00000012143	oscp1a	98	81.356	ENSTRUG00000010531	oscp1a	95	81.356	Takifugu_rubripes
ENSKMAG00000012143	oscp1a	98	63.559	ENSTBEG00000016674	LSM10	96	63.559	Tupaia_belangeri
ENSKMAG00000012143	oscp1a	99	66.942	ENSUAMG00000020265	LSM10	98	66.942	Ursus_americanus
ENSKMAG00000012143	oscp1a	99	66.942	ENSUMAG00000001438	LSM10	56	66.942	Ursus_maritimus
ENSKMAG00000012143	oscp1a	99	66.116	ENSVVUG00000023209	LSM10	98	66.116	Vulpes_vulpes
ENSKMAG00000012143	oscp1a	98	60.169	ENSXETG00000027631	lsm10	96	60.169	Xenopus_tropicalis
ENSKMAG00000012143	oscp1a	98	77.119	ENSXCOG00000018776	oscp1a	74	77.119	Xiphophorus_couchianus
ENSKMAG00000012143	oscp1a	93	78.571	ENSXMAG00000019963	oscp1a	90	78.571	Xiphophorus_maculatus