EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012402 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 15563 bases
Position: chrLWHD01000014.1:2866566-2882128
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016612	RRM_1	PF00076.22	3.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000016845	-	690	-	ENSKMAP00000016612	229 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012402's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012402's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012402	rbm38	56	64.615	ENSKMAG00000006314	rbm24a	98	51.271
ENSKMAG00000012402	rbm38	79	67.033	ENSKMAG00000006096	-	74	62.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012402	rbm38	98	54.661	ENSG00000132819	RBM38	83	79.412	Homo_sapiens
ENSKMAG00000012402	rbm38	99	77.350	ENSAPOG00000003301	rbm38	91	77.350	Acanthochromis_polyacanthus
ENSKMAG00000012402	rbm38	98	60.515	ENSAPOG00000009939	-	92	60.515	Acanthochromis_polyacanthus
ENSKMAG00000012402	rbm38	99	74.359	ENSACIG00000000010	rbm38	91	74.359	Amphilophus_citrinellus
ENSKMAG00000012402	rbm38	98	60.515	ENSACIG00000012502	-	91	78.302	Amphilophus_citrinellus
ENSKMAG00000012402	rbm38	98	58.009	ENSAOCG00000012559	RBM38	91	60.444	Amphiprion_ocellaris
ENSKMAG00000012402	rbm38	99	76.923	ENSAOCG00000013497	-	91	76.923	Amphiprion_ocellaris
ENSKMAG00000012402	rbm38	99	76.923	ENSAPEG00000013137	rbm38	91	76.923	Amphiprion_percula
ENSKMAG00000012402	rbm38	99	59.402	ENSAPEG00000023581	-	92	60.086	Amphiprion_percula
ENSKMAG00000012402	rbm38	98	60.086	ENSATEG00000016710	-	92	60.086	Anabas_testudineus
ENSKMAG00000012402	rbm38	99	74.043	ENSATEG00000016366	rbm38	91	74.043	Anabas_testudineus
ENSKMAG00000012402	rbm38	98	52.137	ENSACAG00000016238	RBM38	88	52.137	Anolis_carolinensis
ENSKMAG00000012402	rbm38	98	55.085	ENSANAG00000031959	RBM38	74	86.517	Aotus_nancymaae
ENSKMAG00000012402	rbm38	98	59.657	ENSACLG00000019514	-	92	59.657	Astatotilapia_calliptera
ENSKMAG00000012402	rbm38	86	56.500	ENSAMXG00000038120	rbm38	79	56.500	Astyanax_mexicanus
ENSKMAG00000012402	rbm38	98	55.652	ENSAMXG00000015601	-	91	55.085	Astyanax_mexicanus
ENSKMAG00000012402	rbm38	98	54.701	ENSBTAG00000008105	RBM38	88	54.274	Bos_taurus
ENSKMAG00000012402	rbm38	98	54.661	ENSCJAG00000019139	RBM38	74	86.517	Callithrix_jacchus
ENSKMAG00000012402	rbm38	98	54.661	ENSCAFG00020021943	RBM38	88	54.237	Canis_lupus_dingo
ENSKMAG00000012402	rbm38	98	54.274	ENSCHIG00000002609	RBM38	88	53.846	Capra_hircus
ENSKMAG00000012402	rbm38	98	54.237	ENSCPOG00000012781	RBM38	88	53.814	Cavia_porcellus
ENSKMAG00000012402	rbm38	98	54.661	ENSCCAG00000036872	RBM38	74	86.517	Cebus_capucinus
ENSKMAG00000012402	rbm38	98	54.701	ENSCATG00000032133	RBM38	74	86.517	Cercocebus_atys
ENSKMAG00000012402	rbm38	98	54.237	ENSCLAG00000005906	RBM38	92	53.814	Chinchilla_lanigera
ENSKMAG00000012402	rbm38	98	54.701	ENSCSAG00000015503	RBM38	88	54.274	Chlorocebus_sabaeus
ENSKMAG00000012402	rbm38	98	50.833	ENSCPBG00000024059	RBM38	98	51.261	Chrysemys_picta_bellii
ENSKMAG00000012402	rbm38	98	44.493	ENSCANG00000030105	-	77	44.053	Colobus_angolensis_palliatus
ENSKMAG00000012402	rbm38	79	57.447	ENSCGRG00001012928	Rbm38	89	52.966	Cricetulus_griseus_chok1gshd
ENSKMAG00000012402	rbm38	93	59.259	ENSCSEG00000020943	rbm38	68	58.986	Cynoglossus_semilaevis
ENSKMAG00000012402	rbm38	98	59.307	ENSCSEG00000004701	-	92	59.307	Cynoglossus_semilaevis
ENSKMAG00000012402	rbm38	98	73.077	ENSCVAG00000015952	rbm38	91	73.077	Cyprinodon_variegatus
ENSKMAG00000012402	rbm38	98	60.086	ENSCVAG00000005472	-	92	59.657	Cyprinodon_variegatus
ENSKMAG00000012402	rbm38	85	62.626	ENSDARG00000058818	rbm38	79	62.626	Danio_rerio
ENSKMAG00000012402	rbm38	99	53.191	ENSDNOG00000032004	RBM38	98	52.991	Dasypus_novemcinctus
ENSKMAG00000012402	rbm38	98	55.128	ENSECAG00000007700	RBM38	88	54.701	Equus_caballus
ENSKMAG00000012402	rbm38	98	53.165	ENSEEUG00000013489	RBM38	89	53.586	Erinaceus_europaeus
ENSKMAG00000012402	rbm38	98	57.983	ENSELUG00000005849	-	92	57.983	Esox_lucius
ENSKMAG00000012402	rbm38	97	61.842	ENSELUG00000000585	-	97	61.404	Esox_lucius
ENSKMAG00000012402	rbm38	98	53.390	ENSFCAG00000042916	RBM38	74	85.393	Felis_catus
ENSKMAG00000012402	rbm38	74	61.017	ENSFALG00000010805	RBM38	87	60.335	Ficedula_albicollis
ENSKMAG00000012402	rbm38	99	74.153	ENSFHEG00000017748	rbm38	91	74.153	Fundulus_heteroclitus
ENSKMAG00000012402	rbm38	98	57.456	ENSFHEG00000006160	-	92	57.806	Fundulus_heteroclitus
ENSKMAG00000012402	rbm38	80	58.201	ENSGMOG00000016655	-	96	62.234	Gadus_morhua
ENSKMAG00000012402	rbm38	99	50.209	ENSGALG00000026081	RBM38	98	51.261	Gallus_gallus
ENSKMAG00000012402	rbm38	99	67.105	ENSGACG00000015224	rbm38	98	66.228	Gasterosteus_aculeatus
ENSKMAG00000012402	rbm38	98	56.034	ENSGACG00000009873	-	97	56.034	Gasterosteus_aculeatus
ENSKMAG00000012402	rbm38	98	51.250	ENSGAGG00000001187	RBM38	98	51.681	Gopherus_agassizii
ENSKMAG00000012402	rbm38	98	59.657	ENSHBUG00000011778	-	92	59.657	Haplochromis_burtoni
ENSKMAG00000012402	rbm38	99	74.468	ENSHBUG00000012058	rbm38	91	74.468	Haplochromis_burtoni
ENSKMAG00000012402	rbm38	99	54.008	ENSHGLG00000015077	RBM38	88	54.661	Heterocephalus_glaber_female
ENSKMAG00000012402	rbm38	99	55.556	ENSHCOG00000019040	rbm38	90	55.556	Hippocampus_comes
ENSKMAG00000012402	rbm38	79	61.957	ENSHCOG00000005622	-	50	63.043	Hippocampus_comes
ENSKMAG00000012402	rbm38	98	56.087	ENSIPUG00000019349	-	92	55.652	Ictalurus_punctatus
ENSKMAG00000012402	rbm38	99	59.244	ENSLBEG00000016163	RBM38	97	58.120	Labrus_bergylta
ENSKMAG00000012402	rbm38	99	73.191	ENSLBEG00000018878	rbm38	91	73.191	Labrus_bergylta
ENSKMAG00000012402	rbm38	98	58.009	ENSLOCG00000003456	rbm38	92	58.009	Lepisosteus_oculatus
ENSKMAG00000012402	rbm38	98	54.701	ENSMFAG00000043808	RBM38	74	86.517	Macaca_fascicularis
ENSKMAG00000012402	rbm38	98	54.701	ENSMMUG00000031391	RBM38	74	86.517	Macaca_mulatta
ENSKMAG00000012402	rbm38	98	54.701	ENSMNEG00000034683	RBM38	74	86.517	Macaca_nemestrina
ENSKMAG00000012402	rbm38	99	74.043	ENSMAMG00000024135	rbm38	91	74.043	Mastacembelus_armatus
ENSKMAG00000012402	rbm38	98	62.069	ENSMAMG00000020499	RBM38	92	62.069	Mastacembelus_armatus
ENSKMAG00000012402	rbm38	98	59.657	ENSMZEG00005000849	-	92	59.657	Maylandia_zebra
ENSKMAG00000012402	rbm38	99	74.468	ENSMZEG00005026036	rbm38	91	74.468	Maylandia_zebra
ENSKMAG00000012402	rbm38	79	56.989	ENSMAUG00000021211	Rbm38	89	52.991	Mesocricetus_auratus
ENSKMAG00000012402	rbm38	98	54.237	ENSMICG00000038011	RBM38	98	53.814	Microcebus_murinus
ENSKMAG00000012402	rbm38	79	57.979	ENSMOCG00000008715	Rbm38	89	53.814	Microtus_ochrogaster
ENSKMAG00000012402	rbm38	98	61.373	ENSMMOG00000020051	-	92	61.373	Mola_mola
ENSKMAG00000012402	rbm38	98	52.101	ENSMODG00000016458	RBM38	90	54.701	Monodelphis_domestica
ENSKMAG00000012402	rbm38	99	59.402	ENSMALG00000022327	rbm38	91	59.829	Monopterus_albus
ENSKMAG00000012402	rbm38	79	64.674	ENSMALG00000004680	RBM38	83	57.895	Monopterus_albus
ENSKMAG00000012402	rbm38	98	52.966	MGP_CAROLIEiJ_G0024745	Rbm38	89	52.966	Mus_caroli
ENSKMAG00000012402	rbm38	98	52.966	ENSMUSG00000027510	Rbm38	89	52.966	Mus_musculus
ENSKMAG00000012402	rbm38	98	52.966	MGP_PahariEiJ_G0026186	Rbm38	89	52.966	Mus_pahari
ENSKMAG00000012402	rbm38	98	52.966	MGP_SPRETEiJ_G0025665	Rbm38	89	52.966	Mus_spretus
ENSKMAG00000012402	rbm38	79	59.574	ENSMPUG00000006518	RBM38	95	56.796	Mustela_putorius_furo
ENSKMAG00000012402	rbm38	98	55.508	ENSMLUG00000011140	RBM38	98	55.085	Myotis_lucifugus
ENSKMAG00000012402	rbm38	99	74.043	ENSNBRG00000022685	rbm38	91	74.043	Neolamprologus_brichardi
ENSKMAG00000012402	rbm38	98	59.657	ENSNBRG00000022545	-	92	59.657	Neolamprologus_brichardi
ENSKMAG00000012402	rbm38	98	54.237	ENSODEG00000007980	RBM38	88	53.814	Octodon_degus
ENSKMAG00000012402	rbm38	98	59.483	ENSONIG00000020324	-	92	59.483	Oreochromis_niloticus
ENSKMAG00000012402	rbm38	98	74.359	ENSONIG00000017073	rbm38	93	74.359	Oreochromis_niloticus
ENSKMAG00000012402	rbm38	99	50.628	ENSOANG00000009259	RBM38	82	50.628	Ornithorhynchus_anatinus
ENSKMAG00000012402	rbm38	99	71.186	ENSORLG00000012154	rbm38	91	70.763	Oryzias_latipes
ENSKMAG00000012402	rbm38	99	58.051	ENSORLG00000027180	-	92	59.916	Oryzias_latipes
ENSKMAG00000012402	rbm38	99	58.051	ENSORLG00020020751	-	92	59.916	Oryzias_latipes_hni
ENSKMAG00000012402	rbm38	99	71.186	ENSORLG00020017871	rbm38	91	70.763	Oryzias_latipes_hni
ENSKMAG00000012402	rbm38	99	71.186	ENSORLG00015012606	rbm38	91	70.763	Oryzias_latipes_hsok
ENSKMAG00000012402	rbm38	99	58.723	ENSORLG00015017040	-	92	59.746	Oryzias_latipes_hsok
ENSKMAG00000012402	rbm38	99	70.763	ENSOMEG00000006805	rbm38	91	70.763	Oryzias_melastigma
ENSKMAG00000012402	rbm38	99	58.120	ENSOMEG00000023912	-	92	58.798	Oryzias_melastigma
ENSKMAG00000012402	rbm38	98	55.085	ENSOGAG00000029136	RBM38	88	54.661	Otolemur_garnettii
ENSKMAG00000012402	rbm38	98	53.390	ENSPPRG00000009507	RBM38	74	85.393	Panthera_pardus
ENSKMAG00000012402	rbm38	51	73.554	ENSPTRG00000045845	-	65	73.554	Pan_troglodytes
ENSKMAG00000012402	rbm38	83	58.586	ENSPTRG00000013661	RBM38	74	86.517	Pan_troglodytes
ENSKMAG00000012402	rbm38	98	46.087	ENSPANG00000033127	-	90	45.852	Papio_anubis
ENSKMAG00000012402	rbm38	98	54.701	ENSPANG00000020919	-	74	86.517	Papio_anubis
ENSKMAG00000012402	rbm38	98	56.710	ENSPKIG00000018122	-	91	76.415	Paramormyrops_kingsleyae
ENSKMAG00000012402	rbm38	99	56.540	ENSPKIG00000025417	rbm38	92	56.540	Paramormyrops_kingsleyae
ENSKMAG00000012402	rbm38	99	51.915	ENSPSIG00000011649	RBM38	90	52.137	Pelodiscus_sinensis
ENSKMAG00000012402	rbm38	98	57.021	ENSPMGG00000017094	-	92	57.872	Periophthalmus_magnuspinnatus
ENSKMAG00000012402	rbm38	100	66.109	ENSPMGG00000011343	rbm38	93	66.805	Periophthalmus_magnuspinnatus
ENSKMAG00000012402	rbm38	98	52.521	ENSPCIG00000013648	RBM38	90	52.101	Phascolarctos_cinereus
ENSKMAG00000012402	rbm38	99	73.222	ENSPFOG00000011658	rbm38	91	73.222	Poecilia_formosa
ENSKMAG00000012402	rbm38	99	72.803	ENSPLAG00000005218	rbm38	91	72.803	Poecilia_latipinna
ENSKMAG00000012402	rbm38	98	59.244	ENSPLAG00000002500	-	92	60.000	Poecilia_latipinna
ENSKMAG00000012402	rbm38	99	72.803	ENSPMEG00000015770	rbm38	91	72.803	Poecilia_mexicana
ENSKMAG00000012402	rbm38	99	73.222	ENSPREG00000007398	rbm38	91	73.222	Poecilia_reticulata
ENSKMAG00000012402	rbm38	98	53.390	ENSPCOG00000026201	RBM38	73	86.517	Propithecus_coquereli
ENSKMAG00000012402	rbm38	79	37.097	ENSPVAG00000006457	RBM38	89	35.897	Pteropus_vampyrus
ENSKMAG00000012402	rbm38	98	59.657	ENSPNYG00000019727	-	91	78.302	Pundamilia_nyererei
ENSKMAG00000012402	rbm38	99	74.043	ENSPNYG00000021373	rbm38	91	74.043	Pundamilia_nyererei
ENSKMAG00000012402	rbm38	88	55.660	ENSPNAG00000010596	rbm38	86	55.660	Pygocentrus_nattereri
ENSKMAG00000012402	rbm38	98	55.794	ENSPNAG00000015123	-	78	80.392	Pygocentrus_nattereri
ENSKMAG00000012402	rbm38	98	53.814	ENSRNOG00000006420	Rbm38	89	53.814	Rattus_norvegicus
ENSKMAG00000012402	rbm38	98	49.339	ENSRROG00000036388	-	87	48.899	Rhinopithecus_roxellana
ENSKMAG00000012402	rbm38	98	54.661	ENSSBOG00000031053	RBM38	83	86.517	Saimiri_boliviensis_boliviensis
ENSKMAG00000012402	rbm38	98	56.957	ENSSFOG00015004453	rbm38	92	59.307	Scleropages_formosus
ENSKMAG00000012402	rbm38	98	60.086	ENSSDUG00000021082	RBM38	92	60.086	Seriola_dumerili
ENSKMAG00000012402	rbm38	99	74.468	ENSSDUG00000022611	rbm38	91	74.468	Seriola_dumerili
ENSKMAG00000012402	rbm38	99	74.468	ENSSLDG00000010845	rbm38	91	74.468	Seriola_lalandi_dorsalis
ENSKMAG00000012402	rbm38	98	60.086	ENSSLDG00000011778	RBM38	92	60.086	Seriola_lalandi_dorsalis
ENSKMAG00000012402	rbm38	98	60.944	ENSSPAG00000020989	RBM38	92	60.944	Stegastes_partitus
ENSKMAG00000012402	rbm38	99	76.596	ENSSPAG00000011113	rbm38	91	76.596	Stegastes_partitus
ENSKMAG00000012402	rbm38	98	54.661	ENSSSCG00000007504	RBM38	88	54.237	Sus_scrofa
ENSKMAG00000012402	rbm38	99	67.382	ENSTRUG00000024954	rbm38	91	67.811	Takifugu_rubripes
ENSKMAG00000012402	rbm38	98	57.806	ENSTRUG00000019869	-	92	58.650	Takifugu_rubripes
ENSKMAG00000012402	rbm38	98	58.369	ENSTNIG00000007093	-	97	58.369	Tetraodon_nigroviridis
ENSKMAG00000012402	rbm38	98	53.390	ENSUAMG00000019780	RBM38	88	53.814	Ursus_americanus
ENSKMAG00000012402	rbm38	98	54.661	ENSVVUG00000017246	RBM38	88	54.237	Vulpes_vulpes
ENSKMAG00000012402	rbm38	79	58.201	ENSXETG00000011268	rbm38	96	50.826	Xenopus_tropicalis
ENSKMAG00000012402	rbm38	99	74.894	ENSXMAG00000023662	rbm38	91	74.894	Xiphophorus_maculatus