EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000012533 (Gene tree)
Gene ID: 108238468
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 21659 bases
Position: chrLWHD01000054.1:2467959-2489617
Accession: 108238468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016784	PIN_4	PF13638.6	7.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017018	-	5059	XM_017420584	ENSKMAP00000016784	973 (aa)	XP_017276073	UPI0007F886BC

Gene Model

Click here to download ENSKMAG00000012533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012533	swt1	61	32.787	ENSG00000116668	SWT1	63	32.459	Homo_sapiens
ENSKMAG00000012533	swt1	98	56.445	ENSAPOG00000014897	-	99	56.384	Acanthochromis_polyacanthus
ENSKMAG00000012533	swt1	58	34.471	ENSAMEG00000013585	SWT1	61	34.471	Ailuropoda_melanoleuca
ENSKMAG00000012533	swt1	98	56.400	ENSAOCG00000013932	swt1	100	56.339	Amphiprion_ocellaris
ENSKMAG00000012533	swt1	98	56.373	ENSAPEG00000009613	-	100	56.314	Amphiprion_percula
ENSKMAG00000012533	swt1	95	55.603	ENSATEG00000018946	swt1	100	54.379	Anabas_testudineus
ENSKMAG00000012533	swt1	62	37.299	ENSAPLG00000008607	SWT1	79	37.299	Anas_platyrhynchos
ENSKMAG00000012533	swt1	58	36.177	ENSACAG00000002276	SWT1	83	32.095	Anolis_carolinensis
ENSKMAG00000012533	swt1	59	33.841	ENSANAG00000027068	SWT1	61	33.841	Aotus_nancymaae
ENSKMAG00000012533	swt1	77	67.161	ENSACLG00000009742	swt1	100	67.347	Astatotilapia_calliptera
ENSKMAG00000012533	swt1	63	45.746	ENSAMXG00000010971	swt1	66	43.862	Astyanax_mexicanus
ENSKMAG00000012533	swt1	59	34.007	ENSCJAG00000005544	SWT1	61	34.007	Callithrix_jacchus
ENSKMAG00000012533	swt1	58	33.731	ENSCAFG00000013543	SWT1	61	33.510	Canis_familiaris
ENSKMAG00000012533	swt1	58	33.731	ENSCAFG00020015648	SWT1	65	33.731	Canis_lupus_dingo
ENSKMAG00000012533	swt1	59	32.993	ENSCHIG00000023511	SWT1	95	32.660	Capra_hircus
ENSKMAG00000012533	swt1	61	33.715	ENSTSYG00000010470	SWT1	63	33.715	Carlito_syrichta
ENSKMAG00000012533	swt1	54	33.640	ENSCPOG00000014251	SWT1	63	33.640	Cavia_porcellus
ENSKMAG00000012533	swt1	59	34.512	ENSCCAG00000033926	SWT1	61	34.512	Cebus_capucinus
ENSKMAG00000012533	swt1	59	33.895	ENSCATG00000042210	SWT1	94	33.895	Cercocebus_atys
ENSKMAG00000012533	swt1	59	33.719	ENSCLAG00000013959	SWT1	63	33.719	Chinchilla_lanigera
ENSKMAG00000012533	swt1	59	33.558	ENSCSAG00000012895	SWT1	61	33.558	Chlorocebus_sabaeus
ENSKMAG00000012533	swt1	57	38.605	ENSCPBG00000015691	SWT1	61	38.191	Chrysemys_picta_bellii
ENSKMAG00000012533	swt1	59	34.010	ENSCANG00000032207	SWT1	94	34.010	Colobus_angolensis_palliatus
ENSKMAG00000012533	swt1	61	35.516	ENSCGRG00001022955	Swt1	67	35.516	Cricetulus_griseus_chok1gshd
ENSKMAG00000012533	swt1	61	35.516	ENSCGRG00000010224	Swt1	64	35.516	Cricetulus_griseus_crigri
ENSKMAG00000012533	swt1	63	59.574	ENSCSEG00000017352	swt1	96	51.900	Cynoglossus_semilaevis
ENSKMAG00000012533	swt1	58	46.329	ENSDARG00000094010	swt1	99	35.500	Danio_rerio
ENSKMAG00000012533	swt1	51	33.658	ENSDNOG00000005254	SWT1	58	33.658	Dasypus_novemcinctus
ENSKMAG00000012533	swt1	59	33.501	ENSDORG00000010531	Swt1	66	33.836	Dipodomys_ordii
ENSKMAG00000012533	swt1	58	33.106	ENSEASG00005005530	SWT1	64	33.106	Equus_asinus_asinus
ENSKMAG00000012533	swt1	58	32.423	ENSECAG00000012085	SWT1	64	32.423	Equus_caballus
ENSKMAG00000012533	swt1	65	47.132	ENSELUG00000020565	swt1	61	47.450	Esox_lucius
ENSKMAG00000012533	swt1	58	33.959	ENSFCAG00000011286	SWT1	61	33.959	Felis_catus
ENSKMAG00000012533	swt1	63	35.538	ENSFALG00000003206	SWT1	68	35.538	Ficedula_albicollis
ENSKMAG00000012533	swt1	59	34.459	ENSFDAG00000007569	SWT1	62	34.459	Fukomys_damarensis
ENSKMAG00000012533	swt1	59	35.479	ENSGALG00000034230	SWT1	65	36.258	Gallus_gallus
ENSKMAG00000012533	swt1	94	52.047	ENSGAFG00000007803	-	99	51.318	Gambusia_affinis
ENSKMAG00000012533	swt1	58	37.671	ENSGAGG00000025050	SWT1	93	37.973	Gopherus_agassizii
ENSKMAG00000012533	swt1	53	34.019	ENSGGOG00000041167	-	90	34.019	Gorilla_gorilla
ENSKMAG00000012533	swt1	81	66.025	ENSHBUG00000006188	swt1	100	66.200	Haplochromis_burtoni
ENSKMAG00000012533	swt1	59	34.966	ENSHGLG00000006542	SWT1	65	34.966	Heterocephalus_glaber_female
ENSKMAG00000012533	swt1	59	35.135	ENSHGLG00100014408	SWT1	63	35.135	Heterocephalus_glaber_male
ENSKMAG00000012533	swt1	58	46.032	ENSIPUG00000009113	-	85	37.253	Ictalurus_punctatus
ENSKMAG00000012533	swt1	59	34.848	ENSSTOG00000010356	SWT1	62	34.848	Ictidomys_tridecemlineatus
ENSKMAG00000012533	swt1	59	36.780	ENSJJAG00000015927	Swt1	64	36.780	Jaculus_jaculus
ENSKMAG00000012533	swt1	96	50.729	ENSLBEG00000020663	-	99	50.403	Labrus_bergylta
ENSKMAG00000012533	swt1	61	36.349	ENSLACG00000009194	SWT1	82	36.349	Latimeria_chalumnae
ENSKMAG00000012533	swt1	59	43.428	ENSLOCG00000001749	swt1	97	44.563	Lepisosteus_oculatus
ENSKMAG00000012533	swt1	58	33.895	ENSLAFG00000004346	-	94	33.895	Loxodonta_africana
ENSKMAG00000012533	swt1	59	33.727	ENSMFAG00000031793	SWT1	95	33.727	Macaca_fascicularis
ENSKMAG00000012533	swt1	57	34.024	ENSMMUG00000013882	SWT1	92	34.024	Macaca_mulatta
ENSKMAG00000012533	swt1	59	33.727	ENSMNEG00000035502	SWT1	95	33.727	Macaca_nemestrina
ENSKMAG00000012533	swt1	61	32.787	ENSMLEG00000038692	SWT1	94	33.729	Mandrillus_leucophaeus
ENSKMAG00000012533	swt1	81	66.550	ENSMZEG00005018489	swt1	100	66.725	Maylandia_zebra
ENSKMAG00000012533	swt1	60	35.294	ENSMGAG00000000973	SWT1	97	35.294	Meleagris_gallopavo
ENSKMAG00000012533	swt1	59	32.812	ENSMAUG00000007996	Swt1	58	32.812	Mesocricetus_auratus
ENSKMAG00000012533	swt1	58	34.412	ENSMICG00000014975	SWT1	61	34.412	Microcebus_murinus
ENSKMAG00000012533	swt1	59	35.702	ENSMOCG00000009776	Swt1	61	35.702	Microtus_ochrogaster
ENSKMAG00000012533	swt1	59	33.831	ENSMODG00000007472	SWT1	61	33.831	Monodelphis_domestica
ENSKMAG00000012533	swt1	98	50.566	ENSMALG00000019308	swt1	100	50.760	Monopterus_albus
ENSKMAG00000012533	swt1	59	35.204	MGP_CAROLIEiJ_G0014692	Swt1	68	42.941	Mus_caroli
ENSKMAG00000012533	swt1	59	35.034	ENSMUSG00000052748	Swt1	67	41.765	Mus_musculus
ENSKMAG00000012533	swt1	59	35.374	MGP_PahariEiJ_G0027928	Swt1	68	43.529	Mus_pahari
ENSKMAG00000012533	swt1	59	35.544	MGP_SPRETEiJ_G0015499	Swt1	68	42.353	Mus_spretus
ENSKMAG00000012533	swt1	58	33.953	ENSMPUG00000011913	SWT1	61	33.953	Mustela_putorius_furo
ENSKMAG00000012533	swt1	57	33.218	ENSMLUG00000001142	SWT1	61	32.886	Myotis_lucifugus
ENSKMAG00000012533	swt1	58	36.007	ENSNGAG00000021080	Swt1	61	35.871	Nannospalax_galili
ENSKMAG00000012533	swt1	59	33.164	ENSNLEG00000018031	SWT1	61	33.503	Nomascus_leucogenys
ENSKMAG00000012533	swt1	83	64.034	ENSONIG00000009994	swt1	100	64.874	Oreochromis_niloticus
ENSKMAG00000012533	swt1	58	34.660	ENSOANG00000001013	-	71	34.660	Ornithorhynchus_anatinus
ENSKMAG00000012533	swt1	57	34.483	ENSOCUG00000004901	SWT1	61	34.483	Oryctolagus_cuniculus
ENSKMAG00000012533	swt1	98	49.437	ENSORLG00000009682	swt1	99	49.448	Oryzias_latipes
ENSKMAG00000012533	swt1	99	49.239	ENSORLG00020011654	swt1	99	49.246	Oryzias_latipes_hni
ENSKMAG00000012533	swt1	100	49.448	ENSORLG00015007734	swt1	99	49.649	Oryzias_latipes_hsok
ENSKMAG00000012533	swt1	98	50.154	ENSOMEG00000006607	swt1	99	50.252	Oryzias_melastigma
ENSKMAG00000012533	swt1	58	34.975	ENSOGAG00000016195	SWT1	61	34.975	Otolemur_garnettii
ENSKMAG00000012533	swt1	59	33.503	ENSOARG00000004156	SWT1	60	33.503	Ovis_aries
ENSKMAG00000012533	swt1	59	32.995	ENSPPAG00000021400	SWT1	61	32.995	Pan_paniscus
ENSKMAG00000012533	swt1	58	33.959	ENSPPRG00000023754	SWT1	61	33.959	Panthera_pardus
ENSKMAG00000012533	swt1	58	33.959	ENSPTIG00000021889	SWT1	61	33.959	Panthera_tigris_altaica
ENSKMAG00000012533	swt1	59	33.164	ENSPTRG00000001777	SWT1	61	33.164	Pan_troglodytes
ENSKMAG00000012533	swt1	59	33.558	ENSPANG00000005099	SWT1	94	33.558	Papio_anubis
ENSKMAG00000012533	swt1	58	47.213	ENSPKIG00000005979	swt1	57	47.213	Paramormyrops_kingsleyae
ENSKMAG00000012533	swt1	57	38.250	ENSPSIG00000008961	SWT1	60	38.250	Pelodiscus_sinensis
ENSKMAG00000012533	swt1	59	37.056	ENSPEMG00000008208	Swt1	61	37.056	Peromyscus_maniculatus_bairdii
ENSKMAG00000012533	swt1	58	33.609	ENSPCIG00000002443	SWT1	61	33.609	Phascolarctos_cinereus
ENSKMAG00000012533	swt1	99	50.452	ENSPFOG00000010988	-	98	62.063	Poecilia_formosa
ENSKMAG00000012533	swt1	99	50.452	ENSPLAG00000022908	-	99	50.854	Poecilia_latipinna
ENSKMAG00000012533	swt1	99	50.200	ENSPMEG00000006943	-	99	50.601	Poecilia_mexicana
ENSKMAG00000012533	swt1	67	44.595	ENSPREG00000014723	-	91	44.595	Poecilia_reticulata
ENSKMAG00000012533	swt1	59	34.680	ENSPPYG00000000415	SWT1	61	34.680	Pongo_abelii
ENSKMAG00000012533	swt1	59	31.134	ENSPVAG00000005968	SWT1	66	30.303	Pteropus_vampyrus
ENSKMAG00000012533	swt1	81	66.200	ENSPNYG00000012934	swt1	100	66.375	Pundamilia_nyererei
ENSKMAG00000012533	swt1	69	42.736	ENSPNAG00000017795	swt1	70	42.736	Pygocentrus_nattereri
ENSKMAG00000012533	swt1	59	35.859	ENSRNOG00000032258	Swt1	63	35.859	Rattus_norvegicus
ENSKMAG00000012533	swt1	59	33.729	ENSRBIG00000040630	SWT1	94	33.729	Rhinopithecus_bieti
ENSKMAG00000012533	swt1	59	34.518	ENSSBOG00000028825	SWT1	61	34.828	Saimiri_boliviensis_boliviensis
ENSKMAG00000012533	swt1	57	35.871	ENSSHAG00000009241	SWT1	60	35.871	Sarcophilus_harrisii
ENSKMAG00000012533	swt1	57	48.057	ENSSFOG00015004895	swt1	55	48.057	Scleropages_formosus
ENSKMAG00000012533	swt1	97	54.237	ENSSMAG00000020761	-	83	55.063	Scophthalmus_maximus
ENSKMAG00000012533	swt1	98	53.512	ENSSDUG00000012345	swt1	100	53.760	Seriola_dumerili
ENSKMAG00000012533	swt1	98	53.719	ENSSLDG00000003821	swt1	100	53.636	Seriola_lalandi_dorsalis
ENSKMAG00000012533	swt1	57	37.113	ENSSPUG00000003899	SWT1	59	37.113	Sphenodon_punctatus
ENSKMAG00000012533	swt1	98	55.544	ENSSPAG00000001030	swt1	100	55.657	Stegastes_partitus
ENSKMAG00000012533	swt1	59	33.670	ENSSSCG00000015569	SWT1	62	34.305	Sus_scrofa
ENSKMAG00000012533	swt1	57	36.411	ENSTGUG00000003718	-	97	36.411	Taeniopygia_guttata
ENSKMAG00000012533	swt1	99	43.514	ENSTRUG00000006420	swt1	99	43.514	Takifugu_rubripes
ENSKMAG00000012533	swt1	58	33.390	ENSTTRG00000005914	SWT1	61	33.390	Tursiops_truncatus
ENSKMAG00000012533	swt1	58	33.788	ENSUAMG00000020937	SWT1	66	34.130	Ursus_americanus
ENSKMAG00000012533	swt1	58	34.130	ENSUMAG00000021918	SWT1	61	34.130	Ursus_maritimus
ENSKMAG00000012533	swt1	58	34.068	ENSVVUG00000009182	SWT1	63	34.068	Vulpes_vulpes
ENSKMAG00000012533	swt1	99	52.077	ENSXMAG00000023472	-	99	52.888	Xiphophorus_maculatus