EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012586 (Gene tree)
Gene ID: 108240561
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 264095 bases
Position: chrLWHD01000003.1:9412213-9676307
Accession: 108240561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016920	RRM_1	PF00076.22	2e-31	1	2
ENSKMAP00000016920	RRM_1	PF00076.22	2e-31	2	2
ENSKMAP00000016902	RRM_1	PF00076.22	2.4e-31	1	2
ENSKMAP00000016902	RRM_1	PF00076.22	2.4e-31	2	2
ENSKMAP00000016883	RRM_1	PF00076.22	4.7e-31	1	2
ENSKMAP00000016883	RRM_1	PF00076.22	4.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017117	-	1892	XM_017424121	ENSKMAP00000016883	524 (aa)	XP_017279610	UPI0007F90554
ENSKMAT00000017135	-	1251	XM_017424139	ENSKMAP00000016902	416 (aa)	XP_017279628	UPI0007F8D70E
ENSKMAT00000017154	-	1086	-	ENSKMAP00000016920	361 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012586	-	52	35.385	ENSKMAG00000017412	elavl3	53	35.385
ENSKMAG00000012586	-	82	62.876	ENSKMAG00000011839	-	85	60.909
ENSKMAG00000012586	-	81	77.365	ENSKMAG00000021167	rbms2b	88	68.267
ENSKMAG00000012586	-	52	37.374	ENSKMAG00000006299	ELAVL2	65	37.374
ENSKMAG00000012586	-	50	36.250	ENSKMAG00000003744	celf5a	50	36.250
ENSKMAG00000012586	-	57	36.250	ENSKMAG00000019602	celf4	62	36.250
ENSKMAG00000012586	-	82	76.490	ENSKMAG00000013911	RBMS1	89	68.684
ENSKMAG00000012586	-	99	81.265	ENSKMAG00000020500	rbms3	99	81.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012586	-	99	88.095	ENSG00000144642	RBMS3	100	87.500	Homo_sapiens
ENSKMAG00000012586	-	100	99.279	ENSAPOG00000003432	-	100	99.279	Acanthochromis_polyacanthus
ENSKMAG00000012586	-	92	81.122	ENSAPOG00000007266	rbms3	95	81.888	Acanthochromis_polyacanthus
ENSKMAG00000012586	-	69	84.158	ENSAMEG00000005947	RBMS3	99	84.158	Ailuropoda_melanoleuca
ENSKMAG00000012586	-	88	95.899	ENSACIG00000006987	-	89	96.933	Amphilophus_citrinellus
ENSKMAG00000012586	-	93	69.706	ENSACIG00000021113	RBMS3	95	74.590	Amphilophus_citrinellus
ENSKMAG00000012586	-	100	93.130	ENSAOCG00000024104	-	100	93.130	Amphiprion_ocellaris
ENSKMAG00000012586	-	99	82.160	ENSAOCG00000021274	rbms3	99	82.160	Amphiprion_ocellaris
ENSKMAG00000012586	-	100	90.865	ENSAPEG00000009481	-	100	90.865	Amphiprion_percula
ENSKMAG00000012586	-	86	85.093	ENSAPEG00000016299	rbms3	89	86.431	Amphiprion_percula
ENSKMAG00000012586	-	99	82.783	ENSATEG00000024295	rbms3	99	83.019	Anabas_testudineus
ENSKMAG00000012586	-	100	99.038	ENSATEG00000008433	-	100	99.038	Anabas_testudineus
ENSKMAG00000012586	-	99	86.343	ENSAPLG00000012270	RBMS3	99	85.648	Anas_platyrhynchos
ENSKMAG00000012586	-	99	88.783	ENSACAG00000028664	RBMS3	99	88.783	Anolis_carolinensis
ENSKMAG00000012586	-	99	85.450	ENSANAG00000021899	RBMS3	99	85.450	Aotus_nancymaae
ENSKMAG00000012586	-	100	92.235	ENSACLG00000008976	-	100	92.235	Astatotilapia_calliptera
ENSKMAG00000012586	-	99	82.033	ENSACLG00000018506	rbms3	99	82.270	Astatotilapia_calliptera
ENSKMAG00000012586	-	62	87.209	ENSAMXG00000043770	-	100	87.209	Astyanax_mexicanus
ENSKMAG00000012586	-	99	89.614	ENSAMXG00000020388	rbms3	99	89.614	Astyanax_mexicanus
ENSKMAG00000012586	-	99	88.571	ENSBTAG00000044062	RBMS3	99	88.571	Bos_taurus
ENSKMAG00000012586	-	99	85.450	ENSCJAG00000004312	RBMS3	99	85.681	Callithrix_jacchus
ENSKMAG00000012586	-	99	84.862	ENSCAFG00000005464	RBMS3	99	84.862	Canis_familiaris
ENSKMAG00000012586	-	99	84.862	ENSCAFG00020024980	RBMS3	99	84.862	Canis_lupus_dingo
ENSKMAG00000012586	-	99	88.095	ENSCHIG00000009144	RBMS3	99	88.095	Capra_hircus
ENSKMAG00000012586	-	76	85.758	ENSTSYG00000002615	RBMS3	99	85.758	Carlito_syrichta
ENSKMAG00000012586	-	88	83.562	ENSCAPG00000017783	RBMS3	95	82.574	Cavia_aperea
ENSKMAG00000012586	-	99	88.434	ENSCPOG00000006457	RBMS3	99	88.434	Cavia_porcellus
ENSKMAG00000012586	-	99	85.450	ENSCCAG00000008671	RBMS3	99	85.681	Cebus_capucinus
ENSKMAG00000012586	-	100	85.092	ENSCATG00000013222	RBMS3	100	85.321	Cercocebus_atys
ENSKMAG00000012586	-	99	87.619	ENSCLAG00000005866	RBMS3	99	87.619	Chinchilla_lanigera
ENSKMAG00000012586	-	65	87.778	ENSCSAG00000009655	RBMS3	99	87.778	Chlorocebus_sabaeus
ENSKMAG00000012586	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSKMAG00000012586	-	99	89.021	ENSCPBG00000022678	RBMS3	99	89.021	Chrysemys_picta_bellii
ENSKMAG00000012586	-	99	85.219	ENSCANG00000032137	RBMS3	99	85.450	Colobus_angolensis_palliatus
ENSKMAG00000012586	-	99	86.265	ENSCGRG00001007243	Rbms3	99	86.265	Cricetulus_griseus_chok1gshd
ENSKMAG00000012586	-	99	86.265	ENSCGRG00000004599	Rbms3	99	86.265	Cricetulus_griseus_crigri
ENSKMAG00000012586	-	99	82.588	ENSCSEG00000010011	RBMS3	99	82.824	Cynoglossus_semilaevis
ENSKMAG00000012586	-	100	97.115	ENSCSEG00000014677	-	94	99.588	Cynoglossus_semilaevis
ENSKMAG00000012586	-	99	83.571	ENSCVAG00000022354	rbms3	99	83.571	Cyprinodon_variegatus
ENSKMAG00000012586	-	100	98.321	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSKMAG00000012586	-	99	89.130	ENSDARG00000044574	rbms3	100	94.444	Danio_rerio
ENSKMAG00000012586	-	99	87.619	ENSDNOG00000016645	RBMS3	96	87.857	Dasypus_novemcinctus
ENSKMAG00000012586	-	99	87.381	ENSDORG00000007220	Rbms3	99	87.381	Dipodomys_ordii
ENSKMAG00000012586	-	87	83.333	ENSETEG00000009485	-	80	70.286	Echinops_telfairi
ENSKMAG00000012586	-	75	54.212	ENSEBUG00000005830	rbms3	89	54.212	Eptatretus_burgeri
ENSKMAG00000012586	-	99	87.857	ENSEASG00005006152	RBMS3	99	88.095	Equus_asinus_asinus
ENSKMAG00000012586	-	99	87.857	ENSECAG00000017871	RBMS3	99	88.095	Equus_caballus
ENSKMAG00000012586	-	90	79.293	ENSEEUG00000014337	RBMS3	100	79.545	Erinaceus_europaeus
ENSKMAG00000012586	-	99	80.142	ENSELUG00000002862	rbms3	99	80.142	Esox_lucius
ENSKMAG00000012586	-	90	97.594	ENSELUG00000006905	-	98	97.531	Esox_lucius
ENSKMAG00000012586	-	99	87.619	ENSFCAG00000002130	RBMS3	99	87.619	Felis_catus
ENSKMAG00000012586	-	99	89.260	ENSFALG00000009165	RBMS3	99	89.260	Ficedula_albicollis
ENSKMAG00000012586	-	99	87.143	ENSFDAG00000008278	RBMS3	99	87.143	Fukomys_damarensis
ENSKMAG00000012586	-	86	79.624	ENSFHEG00000004787	RBMS3	94	76.022	Fundulus_heteroclitus
ENSKMAG00000012586	-	86	96.154	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSKMAG00000012586	-	99	89.260	ENSGALG00000011439	RBMS3	99	89.260	Gallus_gallus
ENSKMAG00000012586	-	100	98.561	ENSGAFG00000003329	-	100	98.561	Gambusia_affinis
ENSKMAG00000012586	-	99	83.135	ENSGAFG00000000168	rbms3	99	83.135	Gambusia_affinis
ENSKMAG00000012586	-	65	88.192	ENSGAGG00000004039	RBMS3	99	88.192	Gopherus_agassizii
ENSKMAG00000012586	-	99	85.450	ENSGGOG00000007228	RBMS3	99	85.681	Gorilla_gorilla
ENSKMAG00000012586	-	59	90.141	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSKMAG00000012586	-	100	98.210	ENSHBUG00000019785	-	95	98.210	Haplochromis_burtoni
ENSKMAG00000012586	-	99	87.619	ENSHGLG00000002170	RBMS3	99	87.619	Heterocephalus_glaber_female
ENSKMAG00000012586	-	99	87.619	ENSHGLG00100014278	RBMS3	99	87.619	Heterocephalus_glaber_male
ENSKMAG00000012586	-	100	96.643	ENSHCOG00000007894	-	100	96.643	Hippocampus_comes
ENSKMAG00000012586	-	99	89.855	ENSIPUG00000017680	rbms3	99	89.855	Ictalurus_punctatus
ENSKMAG00000012586	-	99	88.095	ENSSTOG00000006324	RBMS3	99	88.095	Ictidomys_tridecemlineatus
ENSKMAG00000012586	-	99	84.048	ENSJJAG00000014708	Rbms3	99	84.286	Jaculus_jaculus
ENSKMAG00000012586	-	60	75.983	ENSLBEG00000006677	rbms3	97	75.379	Labrus_bergylta
ENSKMAG00000012586	-	100	97.596	ENSLBEG00000027388	-	100	97.596	Labrus_bergylta
ENSKMAG00000012586	-	99	91.148	ENSLACG00000010581	RBMS3	99	91.148	Latimeria_chalumnae
ENSKMAG00000012586	-	69	91.349	ENSLOCG00000002328	rbms3	99	91.349	Lepisosteus_oculatus
ENSKMAG00000012586	-	99	84.633	ENSLAFG00000000354	RBMS3	99	84.633	Loxodonta_africana
ENSKMAG00000012586	-	99	87.857	ENSMFAG00000033300	RBMS3	99	88.095	Macaca_fascicularis
ENSKMAG00000012586	-	99	87.857	ENSMMUG00000004404	RBMS3	99	88.095	Macaca_mulatta
ENSKMAG00000012586	-	99	85.219	ENSMNEG00000035839	RBMS3	99	85.450	Macaca_nemestrina
ENSKMAG00000012586	-	100	85.092	ENSMLEG00000029464	RBMS3	100	85.321	Mandrillus_leucophaeus
ENSKMAG00000012586	-	100	98.465	ENSMAMG00000002176	-	100	98.465	Mastacembelus_armatus
ENSKMAG00000012586	-	99	83.059	ENSMAMG00000024043	rbms3	99	83.765	Mastacembelus_armatus
ENSKMAG00000012586	-	100	95.550	ENSMZEG00005026469	-	100	92.235	Maylandia_zebra
ENSKMAG00000012586	-	99	82.033	ENSMZEG00005006308	rbms3	99	82.270	Maylandia_zebra
ENSKMAG00000012586	-	99	86.265	ENSMAUG00000016436	Rbms3	99	86.265	Mesocricetus_auratus
ENSKMAG00000012586	-	99	85.450	ENSMICG00000049249	RBMS3	99	85.681	Microcebus_murinus
ENSKMAG00000012586	-	99	86.024	ENSMOCG00000006997	Rbms3	99	86.024	Microtus_ochrogaster
ENSKMAG00000012586	-	86	85.625	ENSMMOG00000008471	RBMS3	89	87.842	Mola_mola
ENSKMAG00000012586	-	100	97.356	ENSMMOG00000015071	-	100	97.356	Mola_mola
ENSKMAG00000012586	-	99	80.222	ENSMODG00000015125	RBMS3	99	79.556	Monodelphis_domestica
ENSKMAG00000012586	-	99	82.588	ENSMALG00000019536	RBMS3	99	80.660	Monopterus_albus
ENSKMAG00000012586	-	100	98.317	ENSMALG00000009155	-	100	98.317	Monopterus_albus
ENSKMAG00000012586	-	99	85.301	MGP_CAROLIEiJ_G0032783	Rbms3	100	85.024	Mus_caroli
ENSKMAG00000012586	-	99	86.024	ENSMUSG00000039607	Rbms3	100	85.990	Mus_musculus
ENSKMAG00000012586	-	99	85.817	MGP_PahariEiJ_G0015650	Rbms3	100	85.990	Mus_pahari
ENSKMAG00000012586	-	99	86.024	MGP_SPRETEiJ_G0033930	Rbms3	100	85.990	Mus_spretus
ENSKMAG00000012586	-	99	84.862	ENSMPUG00000011956	RBMS3	99	84.862	Mustela_putorius_furo
ENSKMAG00000012586	-	99	87.857	ENSMLUG00000000659	RBMS3	99	87.857	Myotis_lucifugus
ENSKMAG00000012586	-	99	87.952	ENSNGAG00000014039	Rbms3	99	87.952	Nannospalax_galili
ENSKMAG00000012586	-	100	98.077	ENSNBRG00000018065	-	100	98.077	Neolamprologus_brichardi
ENSKMAG00000012586	-	99	85.450	ENSNLEG00000004129	RBMS3	99	85.681	Nomascus_leucogenys
ENSKMAG00000012586	-	99	78.490	ENSMEUG00000004772	RBMS3	99	78.719	Notamacropus_eugenii
ENSKMAG00000012586	-	99	84.758	ENSOPRG00000006808	RBMS3	85	84.988	Ochotona_princeps
ENSKMAG00000012586	-	99	88.095	ENSODEG00000003651	RBMS3	99	88.095	Octodon_degus
ENSKMAG00000012586	-	99	76.722	ENSONIG00000007172	rbms3	99	76.960	Oreochromis_niloticus
ENSKMAG00000012586	-	99	85.780	ENSOANG00000010529	RBMS3	99	86.009	Ornithorhynchus_anatinus
ENSKMAG00000012586	-	99	84.174	ENSOCUG00000004840	RBMS3	99	84.404	Oryctolagus_cuniculus
ENSKMAG00000012586	-	100	98.077	ENSORLG00000002306	-	100	98.077	Oryzias_latipes
ENSKMAG00000012586	-	99	81.235	ENSORLG00000005370	RBMS3	99	81.235	Oryzias_latipes
ENSKMAG00000012586	-	100	97.837	ENSORLG00020008496	-	100	97.837	Oryzias_latipes_hni
ENSKMAG00000012586	-	99	80.998	ENSORLG00020022674	RBMS3	99	80.998	Oryzias_latipes_hni
ENSKMAG00000012586	-	99	81.473	ENSORLG00015005509	rbms3	99	81.473	Oryzias_latipes_hsok
ENSKMAG00000012586	-	100	97.837	ENSORLG00015015719	-	100	97.837	Oryzias_latipes_hsok
ENSKMAG00000012586	-	92	97.382	ENSOMEG00000007677	-	100	97.382	Oryzias_melastigma
ENSKMAG00000012586	-	99	81.948	ENSOMEG00000014805	RBMS3	99	81.948	Oryzias_melastigma
ENSKMAG00000012586	-	99	84.404	ENSOARG00000014684	RBMS3	99	84.404	Ovis_aries
ENSKMAG00000012586	-	99	85.450	ENSPPAG00000036519	RBMS3	99	85.681	Pan_paniscus
ENSKMAG00000012586	-	99	84.758	ENSPPRG00000002761	RBMS3	99	84.758	Panthera_pardus
ENSKMAG00000012586	-	99	87.381	ENSPTIG00000011568	RBMS3	99	87.381	Panthera_tigris_altaica
ENSKMAG00000012586	-	99	88.095	ENSPTRG00000014709	RBMS3	99	88.333	Pan_troglodytes
ENSKMAG00000012586	-	100	85.092	ENSPANG00000010234	RBMS3	100	85.321	Papio_anubis
ENSKMAG00000012586	-	62	92.248	ENSPKIG00000007989	-	100	92.248	Paramormyrops_kingsleyae
ENSKMAG00000012586	-	50	92.788	ENSPKIG00000016025	-	86	80.237	Paramormyrops_kingsleyae
ENSKMAG00000012586	-	99	88.544	ENSPSIG00000005269	RBMS3	99	88.544	Pelodiscus_sinensis
ENSKMAG00000012586	-	86	84.906	ENSPMGG00000021544	rbms3	86	86.145	Periophthalmus_magnuspinnatus
ENSKMAG00000012586	-	92	98.168	ENSPMGG00000021683	-	100	98.168	Periophthalmus_magnuspinnatus
ENSKMAG00000012586	-	99	83.333	ENSPEMG00000001117	Rbms3	99	83.333	Peromyscus_maniculatus_bairdii
ENSKMAG00000012586	-	83	92.977	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSKMAG00000012586	-	99	83.610	ENSPFOG00000017887	rbms3	99	83.610	Poecilia_formosa
ENSKMAG00000012586	-	77	81.620	ENSPLAG00000016866	-	82	81.620	Poecilia_latipinna
ENSKMAG00000012586	-	100	98.561	ENSPMEG00000002993	-	100	98.561	Poecilia_mexicana
ENSKMAG00000012586	-	100	81.754	ENSPREG00000011880	rbms3	100	81.754	Poecilia_reticulata
ENSKMAG00000012586	-	97	96.535	ENSPREG00000018221	-	97	96.825	Poecilia_reticulata
ENSKMAG00000012586	-	99	71.789	ENSPPYG00000014050	RBMS3	82	72.018	Pongo_abelii
ENSKMAG00000012586	-	99	65.367	ENSPCAG00000006307	RBMS3	99	65.367	Procavia_capensis
ENSKMAG00000012586	-	99	85.681	ENSPCOG00000017136	RBMS3	99	85.912	Propithecus_coquereli
ENSKMAG00000012586	-	89	88.000	ENSPVAG00000014037	RBMS3	99	75.917	Pteropus_vampyrus
ENSKMAG00000012586	-	100	98.317	ENSPNYG00000012624	-	100	98.317	Pundamilia_nyererei
ENSKMAG00000012586	-	99	81.797	ENSPNYG00000010546	rbms3	99	82.033	Pundamilia_nyererei
ENSKMAG00000012586	-	99	89.614	ENSPNAG00000001800	rbms3	99	89.614	Pygocentrus_nattereri
ENSKMAG00000012586	-	99	86.265	ENSRNOG00000025881	Rbms3	99	86.265	Rattus_norvegicus
ENSKMAG00000012586	-	99	84.988	ENSRBIG00000035863	RBMS3	99	85.219	Rhinopithecus_bieti
ENSKMAG00000012586	-	88	86.807	ENSRROG00000027512	RBMS3	94	86.010	Rhinopithecus_roxellana
ENSKMAG00000012586	-	99	85.450	ENSSBOG00000020232	RBMS3	99	85.681	Saimiri_boliviensis_boliviensis
ENSKMAG00000012586	-	82	93.919	ENSSHAG00000002411	RBMS3	88	91.167	Sarcophilus_harrisii
ENSKMAG00000012586	-	100	94.471	ENSSFOG00015008578	rbms3	100	94.471	Scleropages_formosus
ENSKMAG00000012586	-	98	92.611	ENSSMAG00000020065	-	97	93.532	Scophthalmus_maximus
ENSKMAG00000012586	-	99	79.343	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSKMAG00000012586	-	99	82.824	ENSSDUG00000013656	RBMS3	99	83.059	Seriola_dumerili
ENSKMAG00000012586	-	100	99.279	ENSSDUG00000019287	-	100	99.279	Seriola_dumerili
ENSKMAG00000012586	-	100	99.279	ENSSLDG00000013224	-	100	99.279	Seriola_lalandi_dorsalis
ENSKMAG00000012586	-	99	82.477	ENSSLDG00000020276	RBMS3	99	82.710	Seriola_lalandi_dorsalis
ENSKMAG00000012586	-	83	77.258	ENSSARG00000000695	RBMS3	94	74.212	Sorex_araneus
ENSKMAG00000012586	-	69	87.329	ENSSPUG00000017197	RBMS3	97	86.195	Sphenodon_punctatus
ENSKMAG00000012586	-	100	92.205	ENSSPAG00000003983	-	100	92.395	Stegastes_partitus
ENSKMAG00000012586	-	99	82.160	ENSSPAG00000020693	rbms3	99	82.394	Stegastes_partitus
ENSKMAG00000012586	-	99	87.619	ENSSSCG00000036381	RBMS3	99	87.619	Sus_scrofa
ENSKMAG00000012586	-	78	84.806	ENSTGUG00000003572	RBMS3	99	85.586	Taeniopygia_guttata
ENSKMAG00000012586	-	100	86.223	ENSTRUG00000007482	-	100	86.396	Takifugu_rubripes
ENSKMAG00000012586	-	99	80.471	ENSTRUG00000021719	RBMS3	99	80.471	Takifugu_rubripes
ENSKMAG00000012586	-	82	93.581	ENSTBEG00000005362	RBMS3	94	87.393	Tupaia_belangeri
ENSKMAG00000012586	-	99	84.174	ENSTTRG00000006202	RBMS3	99	84.174	Tursiops_truncatus
ENSKMAG00000012586	-	99	84.862	ENSUMAG00000000263	RBMS3	99	84.862	Ursus_maritimus
ENSKMAG00000012586	-	88	76.178	ENSVPAG00000003842	RBMS3	94	75.064	Vicugna_pacos
ENSKMAG00000012586	-	82	92.953	ENSVVUG00000004660	RBMS3	99	90.435	Vulpes_vulpes
ENSKMAG00000012586	-	70	81.759	ENSXETG00000032055	RBMS3	98	81.759	Xenopus_tropicalis
ENSKMAG00000012586	-	92	82.776	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSKMAG00000012586	-	100	98.801	ENSXMAG00000014382	-	100	98.801	Xiphophorus_maculatus
ENSKMAG00000012586	-	99	81.280	ENSXMAG00000021783	rbms3	99	81.280	Xiphophorus_maculatus