EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012657 (Gene tree)
Gene ID: 108235110
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-19-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8413 bases
Position: chrLWHD01000032.1:273060-281472
Accession: 108235110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000016952	MMR_HSR1	PF01926.23	9.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017186	-	4724	XM_017414906	ENSKMAP00000016952	223 (aa)	XP_017270395	UPI0007F86A62

Gene Model

Click here to download ENSKMAG00000012657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012657	-	73	40.741	ENSKMAG00000017417	-	73	40.741
ENSKMAG00000012657	-	80	45.109	ENSKMAG00000002862	zgc:101559	77	45.109
ENSKMAG00000012657	-	97	41.204	ENSKMAG00000011905	rab11a	97	41.204
ENSKMAG00000012657	-	79	34.615	ENSKMAG00000003646	-	91	34.615
ENSKMAG00000012657	-	96	41.150	ENSKMAG00000007267	rab42a	99	41.150
ENSKMAG00000012657	-	73	41.975	ENSKMAG00000011278	rab6bb	77	42.208
ENSKMAG00000012657	-	71	47.170	ENSKMAG00000006854	rab35b	78	47.170
ENSKMAG00000012657	-	78	40.462	ENSKMAG00000020056	rab12	85	37.441
ENSKMAG00000012657	-	53	30.645	ENSKMAG00000007316	arf2b	64	30.645
ENSKMAG00000012657	-	84	47.872	ENSKMAG00000014038	-	89	47.872
ENSKMAG00000012657	-	93	37.799	ENSKMAG00000005111	rab5aa	89	37.799
ENSKMAG00000012657	-	65	42.763	ENSKMAG00000020034	-	51	42.763
ENSKMAG00000012657	-	73	41.975	ENSKMAG00000002545	-	76	41.975
ENSKMAG00000012657	-	81	39.791	ENSKMAG00000020250	rab4a	89	39.791
ENSKMAG00000012657	-	76	43.529	ENSKMAG00000020392	rab15	79	43.529
ENSKMAG00000012657	-	74	33.533	ENSKMAG00000019397	rhebl1	90	33.533
ENSKMAG00000012657	-	95	45.283	ENSKMAG00000009856	zgc:171927	98	45.283
ENSKMAG00000012657	-	93	34.597	ENSKMAG00000019647	rab34a	77	34.597
ENSKMAG00000012657	-	75	40.828	ENSKMAG00000007364	rab18b	81	40.828
ENSKMAG00000012657	-	77	34.286	ENSKMAG00000021039	si:dkey-13a21.4	94	32.444
ENSKMAG00000012657	-	96	39.070	ENSKMAG00000015516	rab11al	97	39.070
ENSKMAG00000012657	-	83	49.462	ENSKMAG00000004439	rab30	91	49.462
ENSKMAG00000012657	-	74	46.988	ENSKMAG00000017487	rab14	77	46.988
ENSKMAG00000012657	-	87	33.005	ENSKMAG00000017150	-	91	33.005
ENSKMAG00000012657	-	71	30.000	ENSKMAG00000006196	arl8ba	87	30.000
ENSKMAG00000012657	-	75	43.114	ENSKMAG00000001191	RAB15	79	43.114
ENSKMAG00000012657	-	95	35.909	ENSKMAG00000012778	si:dkey-34d22.5	97	35.909
ENSKMAG00000012657	-	76	46.746	ENSKMAG00000009799	rab2a	79	46.746
ENSKMAG00000012657	-	96	33.484	ENSKMAG00000019341	rab34b	83	33.484
ENSKMAG00000012657	-	74	48.193	ENSKMAG00000011301	-	77	48.193
ENSKMAG00000012657	-	81	42.784	ENSKMAG00000003105	rab33ba	82	42.784
ENSKMAG00000012657	-	73	39.506	ENSKMAG00000014705	rab22a	83	39.506
ENSKMAG00000012657	-	70	35.849	ENSKMAG00000017662	rab9a	78	35.849
ENSKMAG00000012657	-	76	48.276	ENSKMAG00000006593	rab33a	81	48.276
ENSKMAG00000012657	-	76	50.000	ENSKMAG00000001908	rab13	88	50.000
ENSKMAG00000012657	-	76	46.154	ENSKMAG00000006170	-	77	46.154
ENSKMAG00000012657	-	77	47.953	ENSKMAG00000006810	rab1ba	85	47.953
ENSKMAG00000012657	-	74	37.647	ENSKMAG00000020013	-	82	37.647
ENSKMAG00000012657	-	74	38.824	ENSKMAG00000006812	RAB7A	82	38.824
ENSKMAG00000012657	-	72	30.539	ENSKMAG00000017893	mras	77	30.539
ENSKMAG00000012657	-	76	43.931	ENSKMAG00000008625	RAB39B	81	43.931
ENSKMAG00000012657	-	96	41.667	ENSKMAG00000015488	rab25b	97	41.667
ENSKMAG00000012657	-	76	45.294	ENSKMAG00000006082	-	78	45.294
ENSKMAG00000012657	-	74	33.333	ENSKMAG00000020448	rheb	90	33.333
ENSKMAG00000012657	-	76	46.154	ENSKMAG00000009033	rab11bb	77	46.154
ENSKMAG00000012657	-	96	39.535	ENSKMAG00000004945	rab25a	97	39.535
ENSKMAG00000012657	-	75	33.918	ENSKMAG00000003080	si:cabz01085950.1	84	33.918
ENSKMAG00000012657	-	69	37.908	ENSKMAG00000018270	rab23	72	36.047
ENSKMAG00000012657	-	90	38.235	ENSKMAG00000018973	-	92	38.235
ENSKMAG00000012657	-	55	33.871	ENSKMAG00000001922	Ha-ras	85	31.288
ENSKMAG00000012657	-	69	41.830	ENSKMAG00000013146	-	79	41.830
ENSKMAG00000012657	-	73	41.975	ENSKMAG00000020038	rab5c	73	41.975
ENSKMAG00000012657	-	87	45.408	ENSKMAG00000017357	rab1ab	96	45.408
ENSKMAG00000012657	-	74	35.503	ENSKMAG00000019964	rab9b	83	35.503
ENSKMAG00000012657	-	75	44.311	ENSKMAG00000003494	si:dkey-16l2.16	79	44.311
ENSKMAG00000012657	-	73	41.975	ENSKMAG00000015507	rab6ba	77	41.975
ENSKMAG00000012657	-	65	32.877	ENSKMAG00000003938	kras	94	30.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012657	-	72	85.714	ENSAOCG00000015948	-	77	85.714	Amphiprion_ocellaris
ENSKMAG00000012657	-	100	80.269	ENSATEG00000012781	-	100	80.269	Anabas_testudineus
ENSKMAG00000012657	-	100	78.125	ENSACLG00000000860	-	100	78.125	Astatotilapia_calliptera
ENSKMAG00000012657	-	99	71.622	ENSAMXG00000039737	RAB19	99	71.622	Astyanax_mexicanus
ENSKMAG00000012657	-	83	68.649	ENSCPBG00000011914	RAB19	86	68.649	Chrysemys_picta_bellii
ENSKMAG00000012657	-	100	81.166	ENSCSEG00000010402	-	100	81.166	Cynoglossus_semilaevis
ENSKMAG00000012657	-	83	69.355	ENSFALG00000003709	RAB19	86	69.355	Ficedula_albicollis
ENSKMAG00000012657	-	100	82.063	ENSGACG00000018847	-	99	82.063	Gasterosteus_aculeatus
ENSKMAG00000012657	-	81	70.000	ENSGAGG00000013139	RAB19	82	70.000	Gopherus_agassizii
ENSKMAG00000012657	-	99	64.159	ENSIPUG00000012509	-	99	64.159	Ictalurus_punctatus
ENSKMAG00000012657	-	99	60.360	ENSIPUG00000016261	RAB19	97	60.360	Ictalurus_punctatus
ENSKMAG00000012657	-	83	83.871	ENSMZEG00005010813	-	89	83.871	Maylandia_zebra
ENSKMAG00000012657	-	97	79.263	ENSONIG00000016851	-	100	79.263	Oreochromis_niloticus
ENSKMAG00000012657	-	80	75.978	ENSPMGG00000009466	RAB19	82	75.978	Periophthalmus_magnuspinnatus
ENSKMAG00000012657	-	97	75.463	ENSPMGG00000007381	-	97	75.463	Periophthalmus_magnuspinnatus
ENSKMAG00000012657	-	99	78.733	ENSPNYG00000008498	-	98	78.733	Pundamilia_nyererei
ENSKMAG00000012657	-	83	76.757	ENSTNIG00000006650	RAB19	85	76.757	Tetraodon_nigroviridis
ENSKMAG00000012657	-	100	77.232	ENSTNIG00000018498	-	99	77.232	Tetraodon_nigroviridis