EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012695 (Gene tree)
Gene ID: 108231648
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 46622 bases
Position: chrLWHD01000012.1:1792222-1838843
Accession: 108231648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017123	R3H	PF01424.22	7.9e-11	1	1
ENSKMAP00000017014	R3H	PF01424.22	8.5e-11	1	1
ENSKMAP00000017002	R3H	PF01424.22	8.9e-11	1	1
ENSKMAP00000017045	R3H	PF01424.22	8.9e-11	1	1
ENSKMAP00000017077	R3H	PF01424.22	9.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017239	-	6080	XM_017408843	ENSKMAP00000017002	1101 (aa)	XP_017264332	-
ENSKMAT00000017251	-	5981	XM_017408851	ENSKMAP00000017014	1068 (aa)	XP_017264340	-
ENSKMAT00000017281	-	6292	XM_017408845	ENSKMAP00000017045	1101 (aa)	XP_017264334	-
ENSKMAT00000017360	-	2811	-	ENSKMAP00000017123	936 (aa)	-	-
ENSKMAT00000017314	-	6238	XM_017408847	ENSKMAP00000017077	1083 (aa)	XP_017264336	-

Gene Model

Click here to download ENSKMAG00000012695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012695	r3hdm2	52	37.568	ENSKMAG00000004052	-	77	37.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012695	r3hdm2	99	68.215	ENSG00000179912	R3HDM2	100	63.990	Homo_sapiens
ENSKMAG00000012695	r3hdm2	51	39.469	ENSAPOG00000021873	-	78	40.212	Acanthochromis_polyacanthus
ENSKMAG00000012695	r3hdm2	97	93.346	ENSAPOG00000020341	r3hdm2	100	93.438	Acanthochromis_polyacanthus
ENSKMAG00000012695	r3hdm2	99	63.925	ENSAMEG00000004812	R3HDM2	96	66.889	Ailuropoda_melanoleuca
ENSKMAG00000012695	r3hdm2	99	86.105	ENSACIG00000016146	r3hdm2	98	85.368	Amphilophus_citrinellus
ENSKMAG00000012695	r3hdm2	97	93.161	ENSAOCG00000023694	r3hdm2	100	93.253	Amphiprion_ocellaris
ENSKMAG00000012695	r3hdm2	97	93.045	ENSAPEG00000008851	r3hdm2	100	93.139	Amphiprion_percula
ENSKMAG00000012695	r3hdm2	54	39.378	ENSATEG00000015519	-	81	38.671	Anabas_testudineus
ENSKMAG00000012695	r3hdm2	99	88.866	ENSATEG00000025024	r3hdm2	100	89.195	Anabas_testudineus
ENSKMAG00000012695	r3hdm2	99	77.876	ENSAPLG00000004298	R3HDM2	85	77.876	Anas_platyrhynchos
ENSKMAG00000012695	r3hdm2	99	65.570	ENSACAG00000006388	R3HDM2	93	65.298	Anolis_carolinensis
ENSKMAG00000012695	r3hdm2	99	68.215	ENSANAG00000025397	-	93	68.987	Aotus_nancymaae
ENSKMAG00000012695	r3hdm2	99	65.016	ENSANAG00000031310	-	95	65.823	Aotus_nancymaae
ENSKMAG00000012695	r3hdm2	97	93.220	ENSACLG00000019106	r3hdm2	100	92.938	Astatotilapia_calliptera
ENSKMAG00000012695	r3hdm2	99	68.919	ENSAMXG00000017180	r3hdm2	99	71.142	Astyanax_mexicanus
ENSKMAG00000012695	r3hdm2	99	67.759	ENSBTAG00000018361	R3HDM2	93	68.743	Bos_taurus
ENSKMAG00000012695	r3hdm2	99	68.321	ENSCJAG00000007365	R3HDM2	93	69.093	Callithrix_jacchus
ENSKMAG00000012695	r3hdm2	99	67.789	ENSCAFG00000000215	R3HDM2	93	68.842	Canis_familiaris
ENSKMAG00000012695	r3hdm2	99	67.899	ENSCAFG00020023713	R3HDM2	96	67.177	Canis_lupus_dingo
ENSKMAG00000012695	r3hdm2	99	68.182	ENSCHIG00000014022	R3HDM2	96	67.119	Capra_hircus
ENSKMAG00000012695	r3hdm2	99	67.192	ENSTSYG00000001449	R3HDM2	96	65.875	Carlito_syrichta
ENSKMAG00000012695	r3hdm2	99	68.743	ENSCPOG00000009217	R3HDM2	99	65.310	Cavia_porcellus
ENSKMAG00000012695	r3hdm2	85	69.927	ENSCCAG00000026083	R3HDM2	92	70.452	Cebus_capucinus
ENSKMAG00000012695	r3hdm2	99	68.004	ENSCATG00000036929	R3HDM2	96	66.667	Cercocebus_atys
ENSKMAG00000012695	r3hdm2	99	68.559	ENSCLAG00000011997	R3HDM2	99	65.651	Chinchilla_lanigera
ENSKMAG00000012695	r3hdm2	99	65.020	ENSCSAG00000004911	R3HDM2	96	67.216	Chlorocebus_sabaeus
ENSKMAG00000012695	r3hdm2	71	67.168	ENSCHOG00000005636	R3HDM2	89	67.197	Choloepus_hoffmanni
ENSKMAG00000012695	r3hdm2	99	65.217	ENSCPBG00000013922	R3HDM2	96	65.262	Chrysemys_picta_bellii
ENSKMAG00000012695	r3hdm2	99	68.110	ENSCANG00000043807	R3HDM2	96	66.860	Colobus_angolensis_palliatus
ENSKMAG00000012695	r3hdm2	99	66.351	ENSCGRG00001017324	R3hdm2	97	64.911	Cricetulus_griseus_chok1gshd
ENSKMAG00000012695	r3hdm2	99	64.024	ENSCGRG00000003862	R3hdm2	97	64.911	Cricetulus_griseus_crigri
ENSKMAG00000012695	r3hdm2	97	90.825	ENSCSEG00000010925	r3hdm2	99	92.173	Cynoglossus_semilaevis
ENSKMAG00000012695	r3hdm2	97	90.226	ENSCVAG00000009058	r3hdm2	100	90.414	Cyprinodon_variegatus
ENSKMAG00000012695	r3hdm2	99	75.000	ENSDARG00000102610	r3hdm2	99	75.789	Danio_rerio
ENSKMAG00000012695	r3hdm2	99	63.956	ENSDNOG00000015033	R3HDM2	100	67.269	Dasypus_novemcinctus
ENSKMAG00000012695	r3hdm2	99	64.308	ENSDORG00000011462	R3hdm2	99	63.564	Dipodomys_ordii
ENSKMAG00000012695	r3hdm2	99	67.827	ENSEASG00005007091	R3HDM2	96	67.208	Equus_asinus_asinus
ENSKMAG00000012695	r3hdm2	99	68.076	ENSECAG00000003157	R3HDM2	96	67.368	Equus_caballus
ENSKMAG00000012695	r3hdm2	58	37.445	ENSELUG00000002532	-	87	36.087	Esox_lucius
ENSKMAG00000012695	r3hdm2	97	79.070	ENSELUG00000015969	r3hdm2	100	78.980	Esox_lucius
ENSKMAG00000012695	r3hdm2	99	65.735	ENSFCAG00000000192	R3HDM2	95	66.895	Felis_catus
ENSKMAG00000012695	r3hdm2	82	61.684	ENSFALG00000000255	R3HDM2	95	62.402	Ficedula_albicollis
ENSKMAG00000012695	r3hdm2	99	67.508	ENSFDAG00000019385	R3HDM2	96	66.444	Fukomys_damarensis
ENSKMAG00000012695	r3hdm2	51	37.753	ENSFHEG00000007936	-	67	39.789	Fundulus_heteroclitus
ENSKMAG00000012695	r3hdm2	97	91.914	ENSFHEG00000016484	r3hdm2	100	91.959	Fundulus_heteroclitus
ENSKMAG00000012695	r3hdm2	99	79.221	ENSGMOG00000007961	r3hdm2	100	83.122	Gadus_morhua
ENSKMAG00000012695	r3hdm2	99	67.647	ENSGALG00000043736	R3HDM2	96	65.066	Gallus_gallus
ENSKMAG00000012695	r3hdm2	99	92.929	ENSGAFG00000013887	r3hdm2	100	92.851	Gambusia_affinis
ENSKMAG00000012695	r3hdm2	52	37.790	ENSGAFG00000015558	-	81	37.057	Gambusia_affinis
ENSKMAG00000012695	r3hdm2	93	90.838	ENSGACG00000006442	r3hdm2	100	90.936	Gasterosteus_aculeatus
ENSKMAG00000012695	r3hdm2	99	65.535	ENSGAGG00000017797	R3HDM2	99	62.936	Gopherus_agassizii
ENSKMAG00000012695	r3hdm2	99	68.004	ENSGGOG00000015007	R3HDM2	96	66.667	Gorilla_gorilla
ENSKMAG00000012695	r3hdm2	99	64.712	ENSHGLG00000010434	-	99	64.880	Heterocephalus_glaber_female
ENSKMAG00000012695	r3hdm2	94	61.735	ENSHGLG00000010421	-	97	61.086	Heterocephalus_glaber_female
ENSKMAG00000012695	r3hdm2	99	67.511	ENSHGLG00100004183	-	99	64.787	Heterocephalus_glaber_male
ENSKMAG00000012695	r3hdm2	96	60.679	ENSHGLG00100018871	-	94	60.240	Heterocephalus_glaber_male
ENSKMAG00000012695	r3hdm2	98	85.463	ENSHCOG00000001142	r3hdm2	97	87.228	Hippocampus_comes
ENSKMAG00000012695	r3hdm2	99	73.840	ENSIPUG00000023873	r3hdm2	100	75.827	Ictalurus_punctatus
ENSKMAG00000012695	r3hdm2	99	63.541	ENSSTOG00000013424	R3HDM2	96	62.290	Ictidomys_tridecemlineatus
ENSKMAG00000012695	r3hdm2	99	65.306	ENSJJAG00000010001	R3hdm2	97	65.660	Jaculus_jaculus
ENSKMAG00000012695	r3hdm2	98	91.513	ENSLBEG00000013115	r3hdm2	97	91.439	Labrus_bergylta
ENSKMAG00000012695	r3hdm2	99	63.263	ENSLACG00000019064	r3hdm2	100	65.828	Latimeria_chalumnae
ENSKMAG00000012695	r3hdm2	99	75.311	ENSLOCG00000005976	r3hdm2	99	72.556	Lepisosteus_oculatus
ENSKMAG00000012695	r3hdm2	97	65.399	ENSLAFG00000006510	R3HDM2	99	65.677	Loxodonta_africana
ENSKMAG00000012695	r3hdm2	99	68.249	ENSMFAG00000036385	R3HDM2	96	66.860	Macaca_fascicularis
ENSKMAG00000012695	r3hdm2	99	68.249	ENSMMUG00000021789	R3HDM2	96	67.400	Macaca_mulatta
ENSKMAG00000012695	r3hdm2	99	68.177	ENSMNEG00000025314	R3HDM2	96	66.893	Macaca_nemestrina
ENSKMAG00000012695	r3hdm2	99	68.110	ENSMLEG00000028915	R3HDM2	96	66.764	Mandrillus_leucophaeus
ENSKMAG00000012695	r3hdm2	58	36.573	ENSMAMG00000011755	-	84	36.656	Mastacembelus_armatus
ENSKMAG00000012695	r3hdm2	97	93.036	ENSMAMG00000009793	r3hdm2	100	92.521	Mastacembelus_armatus
ENSKMAG00000012695	r3hdm2	97	92.778	ENSMZEG00005007319	r3hdm2	100	92.500	Maylandia_zebra
ENSKMAG00000012695	r3hdm2	99	67.508	ENSMICG00000012389	R3HDM2	93	68.349	Microcebus_murinus
ENSKMAG00000012695	r3hdm2	99	66.737	ENSMOCG00000014425	R3hdm2	97	65.127	Microtus_ochrogaster
ENSKMAG00000012695	r3hdm2	99	87.634	ENSMMOG00000007448	r3hdm2	98	87.419	Mola_mola
ENSKMAG00000012695	r3hdm2	99	79.957	ENSMALG00000010211	r3hdm2	98	85.100	Monopterus_albus
ENSKMAG00000012695	r3hdm2	99	67.018	MGP_CAROLIEiJ_G0015896	R3hdm2	96	65.655	Mus_caroli
ENSKMAG00000012695	r3hdm2	99	67.405	ENSMUSG00000025404	R3hdm2	99	64.603	Mus_musculus
ENSKMAG00000012695	r3hdm2	99	67.019	MGP_PahariEiJ_G0031189	R3hdm2	96	66.315	Mus_pahari
ENSKMAG00000012695	r3hdm2	99	67.263	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.483	Mus_spretus
ENSKMAG00000012695	r3hdm2	96	63.008	ENSMPUG00000001818	R3HDM2	97	64.870	Mustela_putorius_furo
ENSKMAG00000012695	r3hdm2	99	63.527	ENSMLUG00000004980	R3HDM2	96	66.603	Myotis_lucifugus
ENSKMAG00000012695	r3hdm2	99	67.865	ENSNGAG00000018800	R3hdm2	95	67.310	Nannospalax_galili
ENSKMAG00000012695	r3hdm2	99	85.384	ENSNBRG00000004483	r3hdm2	100	85.336	Neolamprologus_brichardi
ENSKMAG00000012695	r3hdm2	99	68.215	ENSNLEG00000017351	R3HDM2	96	66.957	Nomascus_leucogenys
ENSKMAG00000012695	r3hdm2	99	57.172	ENSMEUG00000008588	R3HDM2	96	57.402	Notamacropus_eugenii
ENSKMAG00000012695	r3hdm2	99	60.759	ENSOPRG00000013670	R3HDM2	96	59.703	Ochotona_princeps
ENSKMAG00000012695	r3hdm2	99	88.655	ENSONIG00000005075	r3hdm2	100	87.716	Oreochromis_niloticus
ENSKMAG00000012695	r3hdm2	97	64.793	ENSOCUG00000013258	R3HDM2	96	66.730	Oryctolagus_cuniculus
ENSKMAG00000012695	r3hdm2	97	89.851	ENSORLG00000005502	r3hdm2	100	90.233	Oryzias_latipes
ENSKMAG00000012695	r3hdm2	97	89.867	ENSORLG00020017069	r3hdm2	100	90.255	Oryzias_latipes_hni
ENSKMAG00000012695	r3hdm2	97	89.962	ENSORLG00015012735	r3hdm2	100	90.350	Oryzias_latipes_hsok
ENSKMAG00000012695	r3hdm2	99	81.828	ENSOMEG00000018079	r3hdm2	99	82.246	Oryzias_melastigma
ENSKMAG00000012695	r3hdm2	51	35.140	ENSOMEG00000016256	-	76	36.433	Oryzias_melastigma
ENSKMAG00000012695	r3hdm2	51	35.140	ENSOMEG00000009631	-	76	37.175	Oryzias_melastigma
ENSKMAG00000012695	r3hdm2	99	61.958	ENSOGAG00000012055	R3HDM2	96	64.306	Otolemur_garnettii
ENSKMAG00000012695	r3hdm2	95	60.903	ENSOGAG00000027966	-	92	60.903	Otolemur_garnettii
ENSKMAG00000012695	r3hdm2	99	67.861	ENSOARG00000006929	R3HDM2	93	68.842	Ovis_aries
ENSKMAG00000012695	r3hdm2	99	68.215	ENSPPAG00000034395	R3HDM2	96	66.860	Pan_paniscus
ENSKMAG00000012695	r3hdm2	99	67.722	ENSPPRG00000009240	R3HDM2	93	68.882	Panthera_pardus
ENSKMAG00000012695	r3hdm2	99	67.722	ENSPTIG00000008752	R3HDM2	93	68.882	Panthera_tigris_altaica
ENSKMAG00000012695	r3hdm2	99	68.354	ENSPTRG00000046457	R3HDM2	96	66.957	Pan_troglodytes
ENSKMAG00000012695	r3hdm2	99	68.004	ENSPANG00000024002	R3HDM2	96	68.776	Papio_anubis
ENSKMAG00000012695	r3hdm2	99	77.508	ENSPKIG00000003171	r3hdm2	100	79.981	Paramormyrops_kingsleyae
ENSKMAG00000012695	r3hdm2	59	59.413	ENSPSIG00000006954	R3HDM2	93	57.098	Pelodiscus_sinensis
ENSKMAG00000012695	r3hdm2	99	89.031	ENSPMGG00000007061	r3hdm2	99	89.137	Periophthalmus_magnuspinnatus
ENSKMAG00000012695	r3hdm2	99	67.513	ENSPEMG00000015964	R3hdm2	95	65.959	Peromyscus_maniculatus_bairdii
ENSKMAG00000012695	r3hdm2	99	66.250	ENSPCIG00000023841	R3HDM2	100	60.440	Phascolarctos_cinereus
ENSKMAG00000012695	r3hdm2	92	94.247	ENSPFOG00000006077	r3hdm2	93	94.247	Poecilia_formosa
ENSKMAG00000012695	r3hdm2	52	38.018	ENSPFOG00000008096	-	81	37.143	Poecilia_formosa
ENSKMAG00000012695	r3hdm2	52	37.388	ENSPLAG00000006973	-	81	36.525	Poecilia_latipinna
ENSKMAG00000012695	r3hdm2	97	92.453	ENSPLAG00000002971	r3hdm2	100	92.293	Poecilia_latipinna
ENSKMAG00000012695	r3hdm2	52	38.104	ENSPMEG00000014457	-	81	37.057	Poecilia_mexicana
ENSKMAG00000012695	r3hdm2	97	92.453	ENSPMEG00000005330	r3hdm2	100	92.293	Poecilia_mexicana
ENSKMAG00000012695	r3hdm2	97	92.115	ENSPREG00000008424	r3hdm2	100	91.959	Poecilia_reticulata
ENSKMAG00000012695	r3hdm2	96	62.675	ENSPPYG00000004685	R3HDM2	77	61.780	Pongo_abelii
ENSKMAG00000012695	r3hdm2	92	79.923	ENSPCAG00000014642	R3HDM2	89	84.082	Procavia_capensis
ENSKMAG00000012695	r3hdm2	99	67.687	ENSPCOG00000013201	R3HDM2	93	68.532	Propithecus_coquereli
ENSKMAG00000012695	r3hdm2	99	63.964	ENSPVAG00000003967	R3HDM2	96	66.986	Pteropus_vampyrus
ENSKMAG00000012695	r3hdm2	99	84.029	ENSPNYG00000013479	r3hdm2	100	84.365	Pundamilia_nyererei
ENSKMAG00000012695	r3hdm2	99	75.428	ENSPNAG00000017473	r3hdm2	100	76.805	Pygocentrus_nattereri
ENSKMAG00000012695	r3hdm2	99	66.421	ENSRNOG00000007801	R3hdm2	96	65.455	Rattus_norvegicus
ENSKMAG00000012695	r3hdm2	99	66.315	ENSRBIG00000037403	R3HDM2	93	67.089	Rhinopithecus_bieti
ENSKMAG00000012695	r3hdm2	99	68.215	ENSRROG00000022271	R3HDM2	96	66.957	Rhinopithecus_roxellana
ENSKMAG00000012695	r3hdm2	99	68.321	ENSSBOG00000023547	R3HDM2	93	69.093	Saimiri_boliviensis_boliviensis
ENSKMAG00000012695	r3hdm2	99	61.600	ENSSHAG00000003511	R3HDM2	92	70.000	Sarcophilus_harrisii
ENSKMAG00000012695	r3hdm2	99	80.700	ENSSFOG00015011219	r3hdm2	99	79.958	Scleropages_formosus
ENSKMAG00000012695	r3hdm2	99	88.782	ENSSMAG00000012073	r3hdm2	100	91.381	Scophthalmus_maximus
ENSKMAG00000012695	r3hdm2	97	92.380	ENSSDUG00000019269	r3hdm2	100	92.944	Seriola_dumerili
ENSKMAG00000012695	r3hdm2	97	92.586	ENSSLDG00000005252	r3hdm2	100	92.771	Seriola_lalandi_dorsalis
ENSKMAG00000012695	r3hdm2	93	60.177	ENSSARG00000003958	R3HDM2	80	71.491	Sorex_araneus
ENSKMAG00000012695	r3hdm2	99	63.934	ENSSPUG00000014132	R3HDM2	93	63.469	Sphenodon_punctatus
ENSKMAG00000012695	r3hdm2	97	92.474	ENSSPAG00000022594	r3hdm2	100	93.327	Stegastes_partitus
ENSKMAG00000012695	r3hdm2	99	68.215	ENSSSCG00000026498	R3HDM2	100	66.485	Sus_scrofa
ENSKMAG00000012695	r3hdm2	68	66.798	ENSTGUG00000015881	R3HDM2	94	64.993	Taeniopygia_guttata
ENSKMAG00000012695	r3hdm2	99	83.491	ENSTRUG00000015075	r3hdm2	99	82.406	Takifugu_rubripes
ENSKMAG00000012695	r3hdm2	89	95.604	ENSTNIG00000007057	r3hdm2	90	95.604	Tetraodon_nigroviridis
ENSKMAG00000012695	r3hdm2	79	63.176	ENSTBEG00000015967	R3HDM2	75	63.851	Tupaia_belangeri
ENSKMAG00000012695	r3hdm2	91	73.973	ENSTTRG00000013082	R3HDM2	87	73.935	Tursiops_truncatus
ENSKMAG00000012695	r3hdm2	99	67.899	ENSUAMG00000020913	R3HDM2	96	67.186	Ursus_americanus
ENSKMAG00000012695	r3hdm2	96	67.283	ENSUMAG00000019179	R3HDM2	96	65.625	Ursus_maritimus
ENSKMAG00000012695	r3hdm2	93	78.596	ENSVPAG00000008656	R3HDM2	84	86.179	Vicugna_pacos
ENSKMAG00000012695	r3hdm2	96	65.041	ENSVVUG00000018014	R3HDM2	92	67.059	Vulpes_vulpes
ENSKMAG00000012695	r3hdm2	99	64.581	ENSXETG00000017153	r3hdm2	95	62.764	Xenopus_tropicalis
ENSKMAG00000012695	r3hdm2	92	86.584	ENSXCOG00000013882	r3hdm2	100	86.644	Xiphophorus_couchianus
ENSKMAG00000012695	r3hdm2	98	92.963	ENSXMAG00000017978	r3hdm2	100	92.237	Xiphophorus_maculatus
ENSKMAG00000012695	r3hdm2	51	37.862	ENSXMAG00000002994	-	79	37.117	Xiphophorus_maculatus