EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012711 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2585 bases
Position: chrLWHD01000133.1:1088184-1090768
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017020	RVT_1	PF00078.27	7.8e-53	1	1
ENSKMAP00000017020	RNase_H	PF00075.24	7.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017257	-	2585	-	ENSKMAP00000017020	840 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012711	-	90	57.798	ENSKMAG00000021014	-	94	57.798
ENSKMAG00000012711	-	100	52.725	ENSKMAG00000004415	-	68	52.725
ENSKMAG00000012711	-	100	52.725	ENSKMAG00000003982	-	68	52.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012711	-	50	30.425	ENSACLG00000006988	-	62	30.425	Astatotilapia_calliptera
ENSKMAG00000012711	-	99	44.444	ENSAMXG00000043500	-	68	44.444	Astyanax_mexicanus
ENSKMAG00000012711	-	52	30.201	ENSCPBG00000024353	-	86	30.201	Chrysemys_picta_bellii
ENSKMAG00000012711	-	52	30.979	ENSCPBG00000002764	-	75	30.979	Chrysemys_picta_bellii
ENSKMAG00000012711	-	100	47.636	ENSDARG00000103037	CR848788.1	68	47.636	Danio_rerio
ENSKMAG00000012711	-	99	49.227	ENSDARG00000103436	BX548028.1	67	49.227	Danio_rerio
ENSKMAG00000012711	-	100	47.636	ENSDARG00000099201	BX908731.1	68	47.636	Danio_rerio
ENSKMAG00000012711	-	100	45.785	ENSORLG00000023592	-	68	45.785	Oryzias_latipes
ENSKMAG00000012711	-	100	45.667	ENSORLG00000024423	-	68	45.667	Oryzias_latipes
ENSKMAG00000012711	-	100	45.785	ENSORLG00000026314	-	68	45.785	Oryzias_latipes
ENSKMAG00000012711	-	100	45.785	ENSORLG00000027174	-	68	45.785	Oryzias_latipes
ENSKMAG00000012711	-	100	45.785	ENSORLG00020020238	-	68	45.946	Oryzias_latipes_hni
ENSKMAG00000012711	-	52	30.612	ENSORLG00020019816	-	82	30.612	Oryzias_latipes_hni
ENSKMAG00000012711	-	100	46.019	ENSORLG00020018543	-	68	46.019	Oryzias_latipes_hni
ENSKMAG00000012711	-	100	45.902	ENSORLG00020011427	-	68	45.902	Oryzias_latipes_hni
ENSKMAG00000012711	-	100	46.019	ENSORLG00020019901	-	95	46.019	Oryzias_latipes_hni
ENSKMAG00000012711	-	50	32.075	ENSORLG00020002955	-	54	32.075	Oryzias_latipes_hni
ENSKMAG00000012711	-	87	46.622	ENSORLG00015013792	-	67	46.622	Oryzias_latipes_hsok
ENSKMAG00000012711	-	50	31.690	ENSORLG00015020629	-	65	31.925	Oryzias_latipes_hsok
ENSKMAG00000012711	-	83	45.235	ENSOMEG00000003836	-	65	45.235	Oryzias_melastigma
ENSKMAG00000012711	-	99	48.528	ENSPKIG00000019189	-	67	48.528	Paramormyrops_kingsleyae
ENSKMAG00000012711	-	99	53.589	ENSXMAG00000021070	-	68	53.436	Xiphophorus_maculatus
ENSKMAG00000012711	-	99	53.230	ENSXMAG00000028309	-	68	53.081	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	47.872	ENSXMAG00000026248	-	75	47.872	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	46.281	ENSXMAG00000024143	-	95	45.745	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	47.872	ENSXMAG00000026588	-	75	47.872	Xiphophorus_maculatus
ENSKMAG00000012711	-	99	65.827	ENSXMAG00000023078	-	82	65.755	Xiphophorus_maculatus
ENSKMAG00000012711	-	89	43.140	ENSXMAG00000025430	-	98	43.140	Xiphophorus_maculatus
ENSKMAG00000012711	-	89	71.716	ENSXMAG00000020874	-	82	71.716	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	46.045	ENSXMAG00000029466	-	73	45.508	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	51.601	ENSXMAG00000021061	-	68	51.601	Xiphophorus_maculatus
ENSKMAG00000012711	-	99	66.067	ENSXMAG00000029923	-	82	65.993	Xiphophorus_maculatus
ENSKMAG00000012711	-	95	51.192	ENSXMAG00000023126	-	99	51.192	Xiphophorus_maculatus
ENSKMAG00000012711	-	88	53.774	ENSXMAG00000023377	-	95	53.774	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	66.231	ENSXMAG00000027130	-	82	66.231	Xiphophorus_maculatus
ENSKMAG00000012711	-	100	47.872	ENSXMAG00000022223	-	75	47.872	Xiphophorus_maculatus
ENSKMAG00000012711	-	99	53.589	ENSXMAG00000021755	-	68	53.436	Xiphophorus_maculatus