EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000012767 (Gene tree)
Gene ID: 108234677
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 19846 bases
Position: chrLWHD01000002.1:245340-265185
Accession: 108234677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017118	RRM_1	PF00076.22	5.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017355	SCAF8-201	4245	XM_017414055	ENSKMAP00000017118	1372 (aa)	XP_017269544	UPI0007F8D02F

Gene Model

Click here to download ENSKMAG00000012767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012767	SCAF8	78	67.990	ENSG00000213079	SCAF8	87	68.351	Homo_sapiens
ENSKMAG00000012767	SCAF8	100	83.969	ENSAPOG00000015527	SCAF8	100	84.605	Acanthochromis_polyacanthus
ENSKMAG00000012767	SCAF8	78	66.432	ENSAMEG00000007583	SCAF8	84	66.901	Ailuropoda_melanoleuca
ENSKMAG00000012767	SCAF8	100	83.239	ENSAOCG00000002421	SCAF8	100	83.803	Amphiprion_ocellaris
ENSKMAG00000012767	SCAF8	98	74.106	ENSAPEG00000020115	SCAF8	68	70.011	Amphiprion_percula
ENSKMAG00000012767	SCAF8	78	84.395	ENSATEG00000006959	SCAF8	95	84.274	Anabas_testudineus
ENSKMAG00000012767	SCAF8	78	68.350	ENSAPLG00000005765	SCAF8	85	68.103	Anas_platyrhynchos
ENSKMAG00000012767	SCAF8	75	72.861	ENSACAG00000005282	SCAF8	86	68.171	Anolis_carolinensis
ENSKMAG00000012767	SCAF8	78	68.111	ENSANAG00000036184	SCAF8	93	68.472	Aotus_nancymaae
ENSKMAG00000012767	SCAF8	100	81.429	ENSACLG00000018828	SCAF8	100	81.500	Astatotilapia_calliptera
ENSKMAG00000012767	SCAF8	78	68.231	ENSBTAG00000031917	SCAF8	87	68.712	Bos_taurus
ENSKMAG00000012767	SCAF8	78	68.072	ENSCJAG00000012631	SCAF8	84	66.745	Callithrix_jacchus
ENSKMAG00000012767	SCAF8	77	67.966	ENSCAFG00000000570	SCAF8	87	68.453	Canis_familiaris
ENSKMAG00000012767	SCAF8	78	67.883	ENSCAFG00020015048	SCAF8	86	68.453	Canis_lupus_dingo
ENSKMAG00000012767	SCAF8	78	68.231	ENSCHIG00000025041	SCAF8	87	68.712	Capra_hircus
ENSKMAG00000012767	SCAF8	78	67.389	ENSTSYG00000010991	SCAF8	91	67.870	Carlito_syrichta
ENSKMAG00000012767	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	69.231	Cavia_aperea
ENSKMAG00000012767	SCAF8	77	56.796	ENSCPOG00000022216	-	87	57.767	Cavia_porcellus
ENSKMAG00000012767	SCAF8	78	51.939	ENSCPOG00000030311	-	54	53.514	Cavia_porcellus
ENSKMAG00000012767	SCAF8	78	67.870	ENSCCAG00000024952	SCAF8	87	68.351	Cebus_capucinus
ENSKMAG00000012767	SCAF8	78	67.990	ENSCATG00000035361	SCAF8	93	68.351	Cercocebus_atys
ENSKMAG00000012767	SCAF8	78	66.787	ENSCLAG00000004910	SCAF8	87	67.600	Chinchilla_lanigera
ENSKMAG00000012767	SCAF8	78	66.315	ENSCSAG00000013430	SCAF8	93	66.667	Chlorocebus_sabaeus
ENSKMAG00000012767	SCAF8	78	69.678	ENSCPBG00000016330	SCAF8	81	69.678	Chrysemys_picta_bellii
ENSKMAG00000012767	SCAF8	78	67.870	ENSCANG00000039499	SCAF8	92	68.088	Colobus_angolensis_palliatus
ENSKMAG00000012767	SCAF8	78	67.138	ENSCGRG00001020167	Scaf8	92	69.212	Cricetulus_griseus_chok1gshd
ENSKMAG00000012767	SCAF8	78	66.905	ENSCGRG00000004120	Scaf8	92	69.125	Cricetulus_griseus_crigri
ENSKMAG00000012767	SCAF8	100	77.754	ENSCSEG00000000043	-	100	77.039	Cynoglossus_semilaevis
ENSKMAG00000012767	SCAF8	96	79.688	ENSCVAG00000000925	SCAF8	99	79.777	Cyprinodon_variegatus
ENSKMAG00000012767	SCAF8	74	66.282	ENSDNOG00000025271	SCAF8	87	66.154	Dasypus_novemcinctus
ENSKMAG00000012767	SCAF8	78	68.204	ENSDORG00000006391	Scaf8	88	68.325	Dipodomys_ordii
ENSKMAG00000012767	SCAF8	78	67.574	ENSEASG00005018879	SCAF8	88	67.929	Equus_asinus_asinus
ENSKMAG00000012767	SCAF8	78	68.111	ENSECAG00000005540	SCAF8	87	68.592	Equus_caballus
ENSKMAG00000012767	SCAF8	76	71.093	ENSELUG00000002779	SCAF8	100	62.096	Esox_lucius
ENSKMAG00000012767	SCAF8	78	69.343	ENSFCAG00000023424	SCAF8	87	69.465	Felis_catus
ENSKMAG00000012767	SCAF8	77	70.270	ENSFALG00000012433	SCAF8	87	67.391	Ficedula_albicollis
ENSKMAG00000012767	SCAF8	78	66.988	ENSFDAG00000010335	SCAF8	93	67.349	Fukomys_damarensis
ENSKMAG00000012767	SCAF8	100	81.662	ENSFHEG00000008284	SCAF8	100	82.319	Fundulus_heteroclitus
ENSKMAG00000012767	SCAF8	65	78.135	ENSGMOG00000018812	SCAF8	83	78.135	Gadus_morhua
ENSKMAG00000012767	SCAF8	77	67.292	ENSGALG00000013635	SCAF8	87	66.940	Gallus_gallus
ENSKMAG00000012767	SCAF8	100	81.553	ENSGAFG00000018033	SCAF8	100	81.481	Gambusia_affinis
ENSKMAG00000012767	SCAF8	78	79.644	ENSGACG00000006909	SCAF8	99	79.679	Gasterosteus_aculeatus
ENSKMAG00000012767	SCAF8	78	67.990	ENSGGOG00000008645	SCAF8	87	68.351	Gorilla_gorilla
ENSKMAG00000012767	SCAF8	100	81.357	ENSHBUG00000019537	SCAF8	100	81.429	Haplochromis_burtoni
ENSKMAG00000012767	SCAF8	78	67.268	ENSHGLG00000003619	SCAF8	93	67.629	Heterocephalus_glaber_female
ENSKMAG00000012767	SCAF8	77	67.113	ENSHGLG00100004708	SCAF8	92	67.479	Heterocephalus_glaber_male
ENSKMAG00000012767	SCAF8	77	67.927	ENSSTOG00000026043	SCAF8	92	68.293	Ictidomys_tridecemlineatus
ENSKMAG00000012767	SCAF8	77	68.049	ENSJJAG00000020480	Scaf8	86	68.537	Jaculus_jaculus
ENSKMAG00000012767	SCAF8	86	94.776	ENSLBEG00000012484	-	92	91.946	Labrus_bergylta
ENSKMAG00000012767	SCAF8	78	64.236	ENSLOCG00000016856	SCAF8	92	64.877	Lepisosteus_oculatus
ENSKMAG00000012767	SCAF8	78	69.212	ENSLAFG00000000022	SCAF8	86	69.174	Loxodonta_africana
ENSKMAG00000012767	SCAF8	78	67.990	ENSMFAG00000032738	SCAF8	93	68.351	Macaca_fascicularis
ENSKMAG00000012767	SCAF8	78	67.990	ENSMMUG00000015163	SCAF8	93	68.351	Macaca_mulatta
ENSKMAG00000012767	SCAF8	78	67.990	ENSMNEG00000043466	SCAF8	93	68.351	Macaca_nemestrina
ENSKMAG00000012767	SCAF8	77	67.966	ENSMLEG00000034845	SCAF8	92	68.331	Mandrillus_leucophaeus
ENSKMAG00000012767	SCAF8	97	79.427	ENSMAMG00000009457	SCAF8	100	79.824	Mastacembelus_armatus
ENSKMAG00000012767	SCAF8	100	81.357	ENSMZEG00005005698	SCAF8	100	81.429	Maylandia_zebra
ENSKMAG00000012767	SCAF8	78	69.059	ENSMGAG00000012762	SCAF8	85	68.688	Meleagris_gallopavo
ENSKMAG00000012767	SCAF8	77	67.104	ENSMAUG00000009513	Scaf8	92	69.337	Mesocricetus_auratus
ENSKMAG00000012767	SCAF8	78	67.020	ENSMICG00000028965	SCAF8	88	67.373	Microcebus_murinus
ENSKMAG00000012767	SCAF8	78	66.784	ENSMOCG00000014950	Scaf8	85	68.974	Microtus_ochrogaster
ENSKMAG00000012767	SCAF8	98	77.086	ENSMMOG00000002216	SCAF8	99	77.080	Mola_mola
ENSKMAG00000012767	SCAF8	76	70.964	ENSMODG00000008301	SCAF8	83	70.588	Monodelphis_domestica
ENSKMAG00000012767	SCAF8	100	81.348	ENSMALG00000011584	SCAF8	100	81.277	Monopterus_albus
ENSKMAG00000012767	SCAF8	78	68.428	MGP_CAROLIEiJ_G0021016	Scaf8	86	68.796	Mus_caroli
ENSKMAG00000012767	SCAF8	78	68.428	ENSMUSG00000046201	Scaf8	86	68.796	Mus_musculus
ENSKMAG00000012767	SCAF8	78	68.919	MGP_PahariEiJ_G0023334	Scaf8	93	69.287	Mus_pahari
ENSKMAG00000012767	SCAF8	78	66.080	ENSMPUG00000001974	SCAF8	87	66.510	Mustela_putorius_furo
ENSKMAG00000012767	SCAF8	78	68.727	ENSMLUG00000029190	SCAF8	84	69.221	Myotis_lucifugus
ENSKMAG00000012767	SCAF8	78	67.258	ENSNGAG00000012332	Scaf8	89	67.609	Nannospalax_galili
ENSKMAG00000012767	SCAF8	88	80.304	ENSNBRG00000009067	SCAF8	99	81.734	Neolamprologus_brichardi
ENSKMAG00000012767	SCAF8	78	66.427	ENSNLEG00000015509	SCAF8	86	66.383	Nomascus_leucogenys
ENSKMAG00000012767	SCAF8	57	75.258	ENSOPRG00000018413	-	72	75.258	Ochotona_princeps
ENSKMAG00000012767	SCAF8	78	67.509	ENSODEG00000007296	SCAF8	87	67.870	Octodon_degus
ENSKMAG00000012767	SCAF8	78	85.844	ENSONIG00000008119	SCAF8	93	83.800	Oreochromis_niloticus
ENSKMAG00000012767	SCAF8	77	68.049	ENSOCUG00000026063	SCAF8	86	68.415	Oryctolagus_cuniculus
ENSKMAG00000012767	SCAF8	100	80.444	ENSORLG00000017358	SCAF8	100	80.444	Oryzias_latipes
ENSKMAG00000012767	SCAF8	100	80.158	ENSORLG00020002214	SCAF8	100	80.158	Oryzias_latipes_hni
ENSKMAG00000012767	SCAF8	100	80.158	ENSORLG00015015779	SCAF8	100	80.516	Oryzias_latipes_hsok
ENSKMAG00000012767	SCAF8	100	80.643	ENSOMEG00000015471	SCAF8	100	80.786	Oryzias_melastigma
ENSKMAG00000012767	SCAF8	78	65.017	ENSOGAG00000034223	SCAF8	85	65.212	Otolemur_garnettii
ENSKMAG00000012767	SCAF8	78	68.127	ENSOARG00000004159	SCAF8	87	68.613	Ovis_aries
ENSKMAG00000012767	SCAF8	78	67.990	ENSPPAG00000039826	SCAF8	87	68.351	Pan_paniscus
ENSKMAG00000012767	SCAF8	78	68.592	ENSPPRG00000023175	SCAF8	87	69.073	Panthera_pardus
ENSKMAG00000012767	SCAF8	77	68.453	ENSPTIG00000014836	SCAF8	87	68.940	Panthera_tigris_altaica
ENSKMAG00000012767	SCAF8	78	67.990	ENSPTRG00000018727	SCAF8	87	68.351	Pan_troglodytes
ENSKMAG00000012767	SCAF8	78	67.990	ENSPANG00000017489	SCAF8	92	65.584	Papio_anubis
ENSKMAG00000012767	SCAF8	78	70.440	ENSPKIG00000021212	SCAF8	93	70.965	Paramormyrops_kingsleyae
ENSKMAG00000012767	SCAF8	68	65.060	ENSPSIG00000008614	SCAF8	70	65.060	Pelodiscus_sinensis
ENSKMAG00000012767	SCAF8	77	66.192	ENSPEMG00000010531	Scaf8	92	66.311	Peromyscus_maniculatus_bairdii
ENSKMAG00000012767	SCAF8	77	71.199	ENSPCIG00000001141	SCAF8	87	70.952	Phascolarctos_cinereus
ENSKMAG00000012767	SCAF8	100	82.584	ENSPFOG00000004176	SCAF8	92	91.753	Poecilia_formosa
ENSKMAG00000012767	SCAF8	100	82.512	ENSPLAG00000021432	SCAF8	100	82.727	Poecilia_latipinna
ENSKMAG00000012767	SCAF8	100	82.512	ENSPMEG00000007591	SCAF8	100	82.727	Poecilia_mexicana
ENSKMAG00000012767	SCAF8	100	82.441	ENSPREG00000000652	SCAF8	100	82.655	Poecilia_reticulata
ENSKMAG00000012767	SCAF8	78	66.867	ENSPPYG00000017121	SCAF8	87	66.867	Pongo_abelii
ENSKMAG00000012767	SCAF8	65	80.602	ENSPCAG00000013044	SCAF8	74	80.769	Procavia_capensis
ENSKMAG00000012767	SCAF8	78	67.373	ENSPCOG00000002067	SCAF8	87	67.580	Propithecus_coquereli
ENSKMAG00000012767	SCAF8	78	67.793	ENSPVAG00000005582	SCAF8	88	67.913	Pteropus_vampyrus
ENSKMAG00000012767	SCAF8	100	81.500	ENSPNYG00000007277	SCAF8	100	81.571	Pundamilia_nyererei
ENSKMAG00000012767	SCAF8	82	72.161	ENSPNAG00000024740	SCAF8	83	72.462	Pygocentrus_nattereri
ENSKMAG00000012767	SCAF8	78	68.182	ENSRNOG00000016919	Scaf8	93	68.550	Rattus_norvegicus
ENSKMAG00000012767	SCAF8	78	67.870	ENSRBIG00000035769	SCAF8	93	68.231	Rhinopithecus_bieti
ENSKMAG00000012767	SCAF8	78	67.870	ENSRROG00000013580	SCAF8	93	68.231	Rhinopithecus_roxellana
ENSKMAG00000012767	SCAF8	78	67.990	ENSSBOG00000027023	SCAF8	87	68.351	Saimiri_boliviensis_boliviensis
ENSKMAG00000012767	SCAF8	78	70.087	ENSSHAG00000009915	SCAF8	86	69.963	Sarcophilus_harrisii
ENSKMAG00000012767	SCAF8	78	63.573	ENSSFOG00015009481	SCAF8	88	79.733	Scleropages_formosus
ENSKMAG00000012767	SCAF8	100	77.623	ENSSMAG00000008275	SCAF8	100	78.626	Scophthalmus_maximus
ENSKMAG00000012767	SCAF8	71	77.826	ENSSPUG00000015219	SCAF8	79	77.299	Sphenodon_punctatus
ENSKMAG00000012767	SCAF8	78	67.176	ENSSSCG00000004070	SCAF8	88	67.647	Sus_scrofa
ENSKMAG00000012767	SCAF8	78	69.221	ENSTGUG00000011151	SCAF8	85	69.472	Taeniopygia_guttata
ENSKMAG00000012767	SCAF8	100	74.715	ENSTRUG00000009243	SCAF8	100	74.768	Takifugu_rubripes
ENSKMAG00000012767	SCAF8	78	79.618	ENSTNIG00000016885	SCAF8	99	79.250	Tetraodon_nigroviridis
ENSKMAG00000012767	SCAF8	77	66.504	ENSTTRG00000014538	SCAF8	87	67.479	Tursiops_truncatus
ENSKMAG00000012767	SCAF8	78	68.231	ENSUAMG00000024736	SCAF8	86	68.575	Ursus_americanus
ENSKMAG00000012767	SCAF8	76	67.742	ENSUMAG00000013404	SCAF8	87	68.238	Ursus_maritimus
ENSKMAG00000012767	SCAF8	57	60.728	ENSVPAG00000012465	SCAF8	92	62.926	Vicugna_pacos
ENSKMAG00000012767	SCAF8	78	67.590	ENSVVUG00000007532	SCAF8	87	68.453	Vulpes_vulpes
ENSKMAG00000012767	SCAF8	72	71.635	ENSXETG00000013132	scaf8	77	70.875	Xenopus_tropicalis
ENSKMAG00000012767	SCAF8	100	82.345	ENSXMAG00000019192	SCAF8	100	82.416	Xiphophorus_maculatus