EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012816 (Gene tree)
Gene ID: 108229827
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: ADP-ribosylation factor 5-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4824 bases
Position: chrLWHD01000007.1:672818-677641
Accession: 108229827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017193	MMR_HSR1	PF01926.23	5.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017450	-	462	-	ENSKMAP00000017213	153 (aa)	-	-
ENSKMAT00000017430	-	1912	XM_017405505	ENSKMAP00000017193	180 (aa)	XP_017260994	UPI0007F8D2C5

Gene Model

Click here to download ENSKMAG00000012816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012816	-	98	84.181	ENSKMAG00000007316	arf2b	98	84.181
ENSKMAG00000012816	-	99	80.337	ENSKMAG00000019525	arf3b	98	80.337
ENSKMAG00000012816	-	89	31.214	ENSKMAG00000014875	-	87	31.214
ENSKMAG00000012816	-	86	61.935	ENSKMAG00000005931	arl1	84	61.935
ENSKMAG00000012816	-	87	47.531	ENSKMAG00000020210	arl4aa	84	47.531
ENSKMAG00000012816	-	85	46.835	ENSKMAG00000010409	arl14	79	46.835
ENSKMAG00000012816	-	100	80.556	ENSKMAG00000004334	-	100	80.556
ENSKMAG00000012816	-	95	41.618	ENSKMAG00000004435	arl3l2	93	41.618
ENSKMAG00000012816	-	92	34.337	ENSKMAG00000020329	arl8bb	89	34.337
ENSKMAG00000012816	-	92	33.735	ENSKMAG00000002898	arl8a	89	33.735
ENSKMAG00000012816	-	92	48.538	ENSKMAG00000011334	arl4cb	89	48.538
ENSKMAG00000012816	-	88	48.750	ENSKMAG00000007118	arl2	86	48.750
ENSKMAG00000012816	-	94	39.888	ENSKMAG00000000362	ARL6	96	39.888
ENSKMAG00000012816	-	97	45.977	ENSKMAG00000013576	arl8	97	45.977
ENSKMAG00000012816	-	84	92.763	ENSKMAG00000008864	-	90	92.763
ENSKMAG00000012816	-	99	80.337	ENSKMAG00000021494	-	98	80.337
ENSKMAG00000012816	-	98	45.810	ENSKMAG00000017791	-	97	45.810
ENSKMAG00000012816	-	87	48.428	ENSKMAG00000020389	-	77	48.428
ENSKMAG00000012816	-	89	30.857	ENSKMAG00000018006	sar1ab	87	30.857
ENSKMAG00000012816	-	84	43.791	ENSKMAG00000001256	arl11	74	43.791
ENSKMAG00000012816	-	97	81.609	ENSKMAG00000018315	-	97	81.609
ENSKMAG00000012816	-	98	34.392	ENSKMAG00000016837	arfrp1	93	34.392
ENSKMAG00000012816	-	92	40.588	ENSKMAG00000000815	-	88	40.588
ENSKMAG00000012816	-	100	43.333	ENSKMAG00000011323	arl5c	100	43.333
ENSKMAG00000012816	-	92	34.940	ENSKMAG00000006196	arl8ba	89	34.940
ENSKMAG00000012816	-	91	45.399	ENSKMAG00000009772	arl3	90	45.399
ENSKMAG00000012816	-	98	45.763	ENSKMAG00000005826	ARL5A	98	45.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012816	-	99	87.709	ENSG00000004059	ARF5	100	88.816	Homo_sapiens
ENSKMAG00000012816	-	100	93.889	ENSAPOG00000000667	-	100	93.889	Acanthochromis_polyacanthus
ENSKMAG00000012816	-	99	87.709	ENSAMEG00000004635	ARF5	99	87.709	Ailuropoda_melanoleuca
ENSKMAG00000012816	-	100	96.667	ENSACIG00000000467	-	100	96.667	Amphilophus_citrinellus
ENSKMAG00000012816	-	99	91.620	ENSACIG00000005843	arf5	99	91.620	Amphilophus_citrinellus
ENSKMAG00000012816	-	98	69.492	ENSACIG00000014610	zgc:110286	98	69.492	Amphilophus_citrinellus
ENSKMAG00000012816	-	100	89.444	ENSAOCG00000023329	arf5	100	89.444	Amphiprion_ocellaris
ENSKMAG00000012816	-	100	93.889	ENSAOCG00000008113	-	100	93.889	Amphiprion_ocellaris
ENSKMAG00000012816	-	100	89.444	ENSAPEG00000024614	arf5	100	89.444	Amphiprion_percula
ENSKMAG00000012816	-	100	93.889	ENSAPEG00000003087	-	100	93.889	Amphiprion_percula
ENSKMAG00000012816	-	99	91.061	ENSATEG00000003053	ARF5	99	91.061	Anabas_testudineus
ENSKMAG00000012816	-	100	96.111	ENSATEG00000001302	-	100	96.111	Anabas_testudineus
ENSKMAG00000012816	-	99	87.709	ENSANAG00000026446	ARF5	99	87.709	Aotus_nancymaae
ENSKMAG00000012816	-	100	96.111	ENSACLG00000025604	-	100	96.111	Astatotilapia_calliptera
ENSKMAG00000012816	-	99	92.179	ENSACLG00000005705	arf5	99	92.179	Astatotilapia_calliptera
ENSKMAG00000012816	-	99	92.179	ENSAMXG00000038224	-	99	92.179	Astyanax_mexicanus
ENSKMAG00000012816	-	99	92.179	ENSAMXG00000004249	-	99	92.179	Astyanax_mexicanus
ENSKMAG00000012816	-	99	89.385	ENSAMXG00000031467	arf4a	99	89.385	Astyanax_mexicanus
ENSKMAG00000012816	-	99	91.620	ENSAMXG00000031774	ARF5	99	91.620	Astyanax_mexicanus
ENSKMAG00000012816	-	99	87.709	ENSBTAG00000009366	ARF5	99	87.709	Bos_taurus
ENSKMAG00000012816	-	99	87.151	WBGene00000183	arf-3	99	87.151	Caenorhabditis_elegans
ENSKMAG00000012816	-	99	87.709	ENSCJAG00000017604	ARF5	99	87.709	Callithrix_jacchus
ENSKMAG00000012816	-	99	73.709	ENSCAFG00020021629	ARF5	99	73.709	Canis_lupus_dingo
ENSKMAG00000012816	-	99	87.709	ENSCHIG00000018906	ARF5	99	87.709	Capra_hircus
ENSKMAG00000012816	-	99	86.111	ENSCPOG00000006239	ARF5	99	86.111	Cavia_porcellus
ENSKMAG00000012816	-	99	87.709	ENSCCAG00000027943	-	99	87.709	Cebus_capucinus
ENSKMAG00000012816	-	99	87.709	ENSCATG00000010217	ARF5	99	87.709	Cercocebus_atys
ENSKMAG00000012816	-	99	87.709	ENSCLAG00000007930	ARF5	99	87.709	Chinchilla_lanigera
ENSKMAG00000012816	-	99	87.709	ENSCSAG00000010208	ARF5	99	87.709	Chlorocebus_sabaeus
ENSKMAG00000012816	-	100	74.444	ENSCING00000004846	-	100	74.444	Ciona_intestinalis
ENSKMAG00000012816	-	100	72.527	ENSCSAVG00000001959	-	100	72.527	Ciona_savignyi
ENSKMAG00000012816	-	89	87.500	ENSCANG00000037234	ARF5	98	87.500	Colobus_angolensis_palliatus
ENSKMAG00000012816	-	99	87.709	ENSCGRG00001024919	Arf5	99	87.709	Cricetulus_griseus_chok1gshd
ENSKMAG00000012816	-	99	83.799	ENSCSEG00000006004	arf5	99	83.799	Cynoglossus_semilaevis
ENSKMAG00000012816	-	100	97.222	ENSCVAG00000011381	-	100	97.222	Cyprinodon_variegatus
ENSKMAG00000012816	-	99	92.179	ENSCVAG00000009124	ARF5	99	92.179	Cyprinodon_variegatus
ENSKMAG00000012816	-	99	92.179	ENSCVAG00000007314	-	99	92.179	Cyprinodon_variegatus
ENSKMAG00000012816	-	99	92.179	ENSDARG00000113899	zgc:77650	99	92.179	Danio_rerio
ENSKMAG00000012816	-	99	88.827	ENSDARG00000045989	arf4a	99	88.827	Danio_rerio
ENSKMAG00000012816	-	99	72.222	ENSDARG00000074210	ARF5	88	72.222	Danio_rerio
ENSKMAG00000012816	-	99	92.737	ENSDARG00000070472	arf5	99	92.737	Danio_rerio
ENSKMAG00000012816	-	99	87.709	ENSDORG00000000325	Arf5	99	87.709	Dipodomys_ordii
ENSKMAG00000012816	-	99	84.916	FBgn0013749	Arf102F	99	84.916	Drosophila_melanogaster
ENSKMAG00000012816	-	97	84.483	ENSETEG00000009275	ARF5	99	84.483	Echinops_telfairi
ENSKMAG00000012816	-	99	72.067	ENSEBUG00000004484	-	99	72.067	Eptatretus_burgeri
ENSKMAG00000012816	-	99	84.916	ENSEBUG00000014420	-	99	84.916	Eptatretus_burgeri
ENSKMAG00000012816	-	99	74.302	ENSELUG00000014428	arf4	99	74.302	Esox_lucius
ENSKMAG00000012816	-	99	87.709	ENSFCAG00000005482	ARF5	99	87.709	Felis_catus
ENSKMAG00000012816	-	99	91.620	ENSFHEG00000023119	arf5	99	91.620	Fundulus_heteroclitus
ENSKMAG00000012816	-	99	86.592	ENSGMOG00000008747	arf5	99	86.592	Gadus_morhua
ENSKMAG00000012816	-	99	87.151	ENSGMOG00000019109	-	99	87.151	Gadus_morhua
ENSKMAG00000012816	-	100	95.000	ENSGAFG00000005163	-	100	95.000	Gambusia_affinis
ENSKMAG00000012816	-	99	92.179	ENSGAFG00000018703	arf5	99	92.179	Gambusia_affinis
ENSKMAG00000012816	-	100	90.000	ENSGACG00000012500	-	100	90.000	Gasterosteus_aculeatus
ENSKMAG00000012816	-	99	91.620	ENSGACG00000000686	arf5	99	91.620	Gasterosteus_aculeatus
ENSKMAG00000012816	-	99	88.268	ENSGAGG00000000231	ARF5	99	88.268	Gopherus_agassizii
ENSKMAG00000012816	-	99	87.709	ENSGGOG00000016749	ARF5	99	87.709	Gorilla_gorilla
ENSKMAG00000012816	-	99	92.179	ENSHBUG00000008546	arf5	99	92.179	Haplochromis_burtoni
ENSKMAG00000012816	-	100	96.111	ENSHBUG00000011041	-	100	96.111	Haplochromis_burtoni
ENSKMAG00000012816	-	99	87.709	ENSHGLG00000007494	ARF5	99	87.709	Heterocephalus_glaber_female
ENSKMAG00000012816	-	99	86.592	ENSHGLG00100006040	ARF5	60	86.592	Heterocephalus_glaber_male
ENSKMAG00000012816	-	99	89.385	ENSHCOG00000015577	-	100	89.385	Hippocampus_comes
ENSKMAG00000012816	-	99	91.620	ENSIPUG00000004159	Arf5	99	91.620	Ictalurus_punctatus
ENSKMAG00000012816	-	99	91.620	ENSIPUG00000004215	arf5	99	91.620	Ictalurus_punctatus
ENSKMAG00000012816	-	99	72.067	ENSIPUG00000006913	-	70	72.067	Ictalurus_punctatus
ENSKMAG00000012816	-	99	88.827	ENSIPUG00000007016	arf4	99	88.827	Ictalurus_punctatus
ENSKMAG00000012816	-	99	87.709	ENSSTOG00000002104	ARF5	99	87.709	Ictidomys_tridecemlineatus
ENSKMAG00000012816	-	99	87.709	ENSJJAG00000005105	Arf5	99	87.709	Jaculus_jaculus
ENSKMAG00000012816	-	99	85.393	ENSLBEG00000012002	-	98	85.393	Labrus_bergylta
ENSKMAG00000012816	-	99	89.385	ENSLBEG00000026532	arf5	99	89.385	Labrus_bergylta
ENSKMAG00000012816	-	99	87.709	ENSLAFG00000011469	ARF5	99	87.709	Loxodonta_africana
ENSKMAG00000012816	-	99	87.709	ENSMFAG00000019772	ARF5	99	87.709	Macaca_fascicularis
ENSKMAG00000012816	-	99	87.709	ENSMMUG00000046381	ARF5	99	87.709	Macaca_mulatta
ENSKMAG00000012816	-	99	87.709	ENSMNEG00000040893	ARF5	99	87.709	Macaca_nemestrina
ENSKMAG00000012816	-	100	96.111	ENSMAMG00000008223	-	100	96.111	Mastacembelus_armatus
ENSKMAG00000012816	-	99	90.503	ENSMAMG00000021160	arf5	99	90.503	Mastacembelus_armatus
ENSKMAG00000012816	-	88	95.570	ENSMZEG00005019741	-	94	95.570	Maylandia_zebra
ENSKMAG00000012816	-	99	92.179	ENSMZEG00005015033	arf5	66	92.179	Maylandia_zebra
ENSKMAG00000012816	-	99	87.709	ENSMAUG00000014825	Arf5	99	87.709	Mesocricetus_auratus
ENSKMAG00000012816	-	99	87.709	ENSMICG00000000091	ARF5	99	87.709	Microcebus_murinus
ENSKMAG00000012816	-	99	87.709	ENSMOCG00000022861	Arf5	99	87.709	Microtus_ochrogaster
ENSKMAG00000012816	-	99	87.151	ENSMODG00000015229	ARF5	99	87.151	Monodelphis_domestica
ENSKMAG00000012816	-	100	96.111	ENSMALG00000006020	-	100	96.111	Monopterus_albus
ENSKMAG00000012816	-	99	69.832	ENSMALG00000022638	zgc:110286	100	69.832	Monopterus_albus
ENSKMAG00000012816	-	99	91.061	ENSMALG00000010117	-	99	91.061	Monopterus_albus
ENSKMAG00000012816	-	99	87.709	MGP_CAROLIEiJ_G0028156	Arf5	99	87.709	Mus_caroli
ENSKMAG00000012816	-	99	87.709	ENSMUSG00000020440	Arf5	99	87.709	Mus_musculus
ENSKMAG00000012816	-	99	87.709	MGP_PahariEiJ_G0021914	Arf5	99	87.709	Mus_pahari
ENSKMAG00000012816	-	99	87.709	MGP_SPRETEiJ_G0029156	Arf5	99	87.709	Mus_spretus
ENSKMAG00000012816	-	99	87.709	ENSMPUG00000006675	ARF5	99	87.709	Mustela_putorius_furo
ENSKMAG00000012816	-	99	87.709	ENSMLUG00000017122	ARF5	99	87.709	Myotis_lucifugus
ENSKMAG00000012816	-	99	87.709	ENSNGAG00000011743	Arf5	99	87.709	Nannospalax_galili
ENSKMAG00000012816	-	99	92.179	ENSNBRG00000018854	arf5	99	92.179	Neolamprologus_brichardi
ENSKMAG00000012816	-	99	87.709	ENSODEG00000011800	ARF5	99	87.709	Octodon_degus
ENSKMAG00000012816	-	99	92.179	ENSONIG00000007594	arf5	99	92.179	Oreochromis_niloticus
ENSKMAG00000012816	-	100	96.111	ENSONIG00000014890	-	100	96.111	Oreochromis_niloticus
ENSKMAG00000012816	-	99	87.709	ENSOCUG00000024365	ARF5	99	87.709	Oryctolagus_cuniculus
ENSKMAG00000012816	-	100	94.444	ENSORLG00020001755	-	100	94.444	Oryzias_latipes_hni
ENSKMAG00000012816	-	99	91.620	ENSOMEG00000020821	ARF5	99	91.620	Oryzias_melastigma
ENSKMAG00000012816	-	100	95.000	ENSOMEG00000000211	-	65	95.000	Oryzias_melastigma
ENSKMAG00000012816	-	99	87.709	ENSOGAG00000013336	ARF5	99	87.709	Otolemur_garnettii
ENSKMAG00000012816	-	99	87.709	ENSPPAG00000037755	ARF5	99	87.709	Pan_paniscus
ENSKMAG00000012816	-	99	87.709	ENSPPRG00000004674	ARF5	99	87.709	Panthera_pardus
ENSKMAG00000012816	-	99	87.709	ENSPTRG00000019651	ARF5	99	87.709	Pan_troglodytes
ENSKMAG00000012816	-	99	87.709	ENSPANG00000032970	ARF5	99	87.709	Papio_anubis
ENSKMAG00000012816	-	99	87.709	ENSPKIG00000025349	arf4a	99	87.709	Paramormyrops_kingsleyae
ENSKMAG00000012816	-	100	90.556	ENSPKIG00000013814	-	100	90.556	Paramormyrops_kingsleyae
ENSKMAG00000012816	-	99	90.503	ENSPKIG00000025381	-	99	90.503	Paramormyrops_kingsleyae
ENSKMAG00000012816	-	99	86.034	ENSPMGG00000009985	-	99	86.034	Periophthalmus_magnuspinnatus
ENSKMAG00000012816	-	99	87.709	ENSPEMG00000021476	Arf5	99	87.709	Peromyscus_maniculatus_bairdii
ENSKMAG00000012816	-	99	78.212	ENSPMAG00000009600	arf4a	100	78.212	Petromyzon_marinus
ENSKMAG00000012816	-	99	92.179	ENSPFOG00000015817	arf5	99	92.179	Poecilia_formosa
ENSKMAG00000012816	-	100	94.475	ENSPFOG00000017992	-	100	94.475	Poecilia_formosa
ENSKMAG00000012816	-	100	95.000	ENSPLAG00000015630	-	100	95.000	Poecilia_latipinna
ENSKMAG00000012816	-	99	92.179	ENSPLAG00000006742	arf5	99	92.179	Poecilia_latipinna
ENSKMAG00000012816	-	99	92.179	ENSPMEG00000009605	arf5	99	92.179	Poecilia_mexicana
ENSKMAG00000012816	-	100	95.000	ENSPMEG00000004624	-	100	95.000	Poecilia_mexicana
ENSKMAG00000012816	-	99	87.709	ENSPCOG00000027640	ARF5	99	87.709	Propithecus_coquereli
ENSKMAG00000012816	-	99	87.709	ENSPVAG00000013940	ARF5	99	87.709	Pteropus_vampyrus
ENSKMAG00000012816	-	99	92.179	ENSPNYG00000001663	arf5	99	92.179	Pundamilia_nyererei
ENSKMAG00000012816	-	100	96.111	ENSPNYG00000004931	-	100	96.111	Pundamilia_nyererei
ENSKMAG00000012816	-	99	74.860	ENSPNAG00000005054	-	99	74.860	Pygocentrus_nattereri
ENSKMAG00000012816	-	99	70.950	ENSPNAG00000004475	-	99	70.950	Pygocentrus_nattereri
ENSKMAG00000012816	-	99	92.179	ENSPNAG00000024427	-	99	92.179	Pygocentrus_nattereri
ENSKMAG00000012816	-	99	88.268	ENSPNAG00000004745	arf4a	99	88.268	Pygocentrus_nattereri
ENSKMAG00000012816	-	99	87.709	ENSRNOG00000007806	Arf5	99	87.709	Rattus_norvegicus
ENSKMAG00000012816	-	99	87.709	ENSRBIG00000039868	ARF5	99	87.709	Rhinopithecus_bieti
ENSKMAG00000012816	-	99	87.709	ENSRROG00000041157	ARF5	99	87.709	Rhinopithecus_roxellana
ENSKMAG00000012816	-	99	87.709	ENSSBOG00000021669	ARF5	99	87.709	Saimiri_boliviensis_boliviensis
ENSKMAG00000012816	-	99	87.151	ENSSHAG00000015053	ARF5	99	87.151	Sarcophilus_harrisii
ENSKMAG00000012816	-	99	91.061	ENSSFOG00015020707	ARF5	99	91.061	Scleropages_formosus
ENSKMAG00000012816	-	99	80.447	ENSSFOG00015007701	-	99	80.447	Scleropages_formosus
ENSKMAG00000012816	-	99	89.944	ENSSMAG00000011361	arf5	99	89.944	Scophthalmus_maximus
ENSKMAG00000012816	-	100	91.667	ENSSMAG00000004541	-	100	91.667	Scophthalmus_maximus
ENSKMAG00000012816	-	99	91.061	ENSSDUG00000005105	arf5	99	91.061	Seriola_dumerili
ENSKMAG00000012816	-	99	91.061	ENSSLDG00000017188	arf5	99	91.061	Seriola_lalandi_dorsalis
ENSKMAG00000012816	-	99	89.944	ENSSPAG00000014434	arf5	99	89.944	Stegastes_partitus
ENSKMAG00000012816	-	100	95.000	ENSSPAG00000022680	-	100	95.000	Stegastes_partitus
ENSKMAG00000012816	-	99	87.709	ENSSSCG00000016593	ARF5	99	87.709	Sus_scrofa
ENSKMAG00000012816	-	99	86.592	ENSTRUG00000025462	-	100	86.592	Takifugu_rubripes
ENSKMAG00000012816	-	99	89.944	ENSTNIG00000003348	arf5	100	89.944	Tetraodon_nigroviridis
ENSKMAG00000012816	-	99	85.475	ENSTNIG00000017954	-	100	85.475	Tetraodon_nigroviridis
ENSKMAG00000012816	-	89	88.820	ENSTTRG00000006043	ARF5	99	88.820	Tursiops_truncatus
ENSKMAG00000012816	-	99	87.709	ENSUAMG00000012982	ARF5	99	87.709	Ursus_americanus
ENSKMAG00000012816	-	99	87.709	ENSVVUG00000007062	ARF5	99	87.709	Vulpes_vulpes
ENSKMAG00000012816	-	100	95.000	ENSXCOG00000020384	-	100	95.000	Xiphophorus_couchianus
ENSKMAG00000012816	-	100	95.000	ENSXMAG00000004558	-	100	95.000	Xiphophorus_maculatus
ENSKMAG00000012816	-	99	92.179	ENSXMAG00000015306	arf5	99	92.179	Xiphophorus_maculatus