EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: protein LSM14 homolog B
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2914 bases
Position: chrLWHD01000014.1:3598447-3601360
Accession: 108232013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017202	FDF	PF09532.10	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017439	-	1846	XM_017409474	ENSKMAP00000017202	229 (aa)	XP_017264963	-

Gene Model

Click here to download ENSKMAG00000012834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012834	-	86	42.233	ENSKMAG00000017524	lsm14b	52	38.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012834	-	88	43.062	ENSG00000149657	LSM14B	69	39.779	Homo_sapiens
ENSKMAG00000012834	-	86	42.347	ENSAPOG00000001780	lsm14b	51	38.208	Acanthochromis_polyacanthus
ENSKMAG00000012834	-	63	67.010	ENSAPOG00000010003	-	80	68.116	Acanthochromis_polyacanthus
ENSKMAG00000012834	-	50	53.659	ENSACIG00000003147	LSM14B	74	42.654	Amphilophus_citrinellus
ENSKMAG00000012834	-	100	65.236	ENSAOCG00000006667	LSM14B	53	65.854	Amphiprion_ocellaris
ENSKMAG00000012834	-	86	42.857	ENSAOCG00000012380	lsm14b	51	43.069	Amphiprion_ocellaris
ENSKMAG00000012834	-	86	40.099	ENSAPEG00000023633	lsm14b	50	39.320	Amphiprion_percula
ENSKMAG00000012834	-	96	53.036	ENSATEG00000015895	LSM14B	70	53.125	Anabas_testudineus
ENSKMAG00000012834	-	86	45.408	ENSATEG00000016603	lsm14b	51	45.545	Anabas_testudineus
ENSKMAG00000012834	-	88	44.019	ENSANAG00000037915	LSM14B	52	43.810	Aotus_nancymaae
ENSKMAG00000012834	-	90	56.585	ENSACLG00000011955	-	68	55.779	Astatotilapia_calliptera
ENSKMAG00000012834	-	86	42.424	ENSACLG00000019663	lsm14b	52	36.449	Astatotilapia_calliptera
ENSKMAG00000012834	-	69	62.893	ENSACLG00000013004	-	53	62.092	Astatotilapia_calliptera
ENSKMAG00000012834	-	90	59.512	ENSACLG00000019624	-	68	58.794	Astatotilapia_calliptera
ENSKMAG00000012834	-	90	54.634	ENSACLG00000008384	-	65	53.769	Astatotilapia_calliptera
ENSKMAG00000012834	-	69	62.264	ENSACLG00000027552	-	52	61.438	Astatotilapia_calliptera
ENSKMAG00000012834	-	86	47.573	ENSAMXG00000002865	lsm14b	54	49.296	Astyanax_mexicanus
ENSKMAG00000012834	-	88	44.811	ENSCJAG00000014434	LSM14B	52	44.601	Callithrix_jacchus
ENSKMAG00000012834	-	88	45.455	ENSCAFG00000012518	LSM14B	51	45.238	Canis_familiaris
ENSKMAG00000012834	-	88	45.455	ENSCAFG00020022150	LSM14B	52	45.238	Canis_lupus_dingo
ENSKMAG00000012834	-	88	43.062	ENSCHIG00000010284	-	52	42.857	Capra_hircus
ENSKMAG00000012834	-	100	38.912	ENSCHIG00000022681	-	52	40.000	Capra_hircus
ENSKMAG00000012834	-	88	44.286	ENSTSYG00000031914	LSM14B	52	44.076	Carlito_syrichta
ENSKMAG00000012834	-	88	43.541	ENSCAPG00000013059	LSM14B	65	43.333	Cavia_aperea
ENSKMAG00000012834	-	88	44.019	ENSCPOG00000038080	LSM14B	65	43.810	Cavia_porcellus
ENSKMAG00000012834	-	59	53.846	ENSCCAG00000021267	LSM14B	52	43.810	Cebus_capucinus
ENSKMAG00000012834	-	88	42.105	ENSCATG00000036006	LSM14B	52	41.905	Cercocebus_atys
ENSKMAG00000012834	-	88	43.541	ENSCLAG00000003186	LSM14B	65	43.333	Chinchilla_lanigera
ENSKMAG00000012834	-	88	43.810	ENSCANG00000036986	LSM14B	58	43.333	Colobus_angolensis_palliatus
ENSKMAG00000012834	-	88	44.976	ENSCGRG00001018399	Lsm14b	65	44.286	Cricetulus_griseus_chok1gshd
ENSKMAG00000012834	-	56	50.365	ENSCGRG00000002484	-	52	53.097	Cricetulus_griseus_crigri
ENSKMAG00000012834	-	88	44.976	ENSCGRG00000006111	-	67	44.286	Cricetulus_griseus_crigri
ENSKMAG00000012834	-	86	38.579	ENSCSEG00000004722	lsm14b	52	39.109	Cynoglossus_semilaevis
ENSKMAG00000012834	-	98	51.515	ENSCSEG00000020669	LSM14B	52	51.923	Cynoglossus_semilaevis
ENSKMAG00000012834	-	61	60.544	ENSCVAG00000012433	-	71	44.019	Cyprinodon_variegatus
ENSKMAG00000012834	-	58	50.704	ENSDARG00000025386	lsm14b	59	41.322	Danio_rerio
ENSKMAG00000012834	-	88	45.933	ENSDNOG00000025246	LSM14B	65	45.714	Dasypus_novemcinctus
ENSKMAG00000012834	-	88	45.238	ENSDORG00000016683	Lsm14b	65	45.024	Dipodomys_ordii
ENSKMAG00000012834	-	89	37.143	ENSETEG00000001869	-	51	35.922	Echinops_telfairi
ENSKMAG00000012834	-	76	41.989	ENSETEG00000011188	-	74	41.989	Echinops_telfairi
ENSKMAG00000012834	-	88	43.333	ENSECAG00000010659	LSM14B	52	42.857	Equus_caballus
ENSKMAG00000012834	-	97	44.690	ENSELUG00000005780	lsm14b	52	46.377	Esox_lucius
ENSKMAG00000012834	-	86	49.490	ENSELUG00000016299	LSM14B	52	49.505	Esox_lucius
ENSKMAG00000012834	-	88	45.455	ENSFCAG00000003248	LSM14B	52	45.238	Felis_catus
ENSKMAG00000012834	-	88	42.857	ENSFALG00000010618	LSM14B	52	43.128	Ficedula_albicollis
ENSKMAG00000012834	-	88	43.541	ENSFDAG00000002214	LSM14B	65	43.333	Fukomys_damarensis
ENSKMAG00000012834	-	88	38.679	ENSFHEG00000006237	lsm14b	51	35.211	Fundulus_heteroclitus
ENSKMAG00000012834	-	95	54.338	ENSGAFG00000013723	LSM14B	73	53.202	Gambusia_affinis
ENSKMAG00000012834	-	88	42.365	ENSGACG00000009973	lsm14b	51	40.099	Gasterosteus_aculeatus
ENSKMAG00000012834	-	88	45.455	ENSGAGG00000004106	LSM14B	77	44.762	Gopherus_agassizii
ENSKMAG00000012834	-	88	43.062	ENSGGOG00000005630	LSM14B	65	42.857	Gorilla_gorilla
ENSKMAG00000012834	-	88	43.541	ENSHGLG00000015055	LSM14B	65	43.333	Heterocephalus_glaber_female
ENSKMAG00000012834	-	88	43.541	ENSHGLG00100015273	LSM14B	66	43.333	Heterocephalus_glaber_male
ENSKMAG00000012834	-	95	56.164	ENSHCOG00000018747	LSM14B	54	53.960	Hippocampus_comes
ENSKMAG00000012834	-	86	47.343	ENSIPUG00000014946	lsm14b	50	50.239	Ictalurus_punctatus
ENSKMAG00000012834	-	88	44.019	ENSSTOG00000020482	LSM14B	65	43.810	Ictidomys_tridecemlineatus
ENSKMAG00000012834	-	88	44.976	ENSJJAG00000012728	Lsm14b	65	44.762	Jaculus_jaculus
ENSKMAG00000012834	-	95	50.685	ENSLBEG00000007951	LSM14B	70	48.000	Labrus_bergylta
ENSKMAG00000012834	-	85	44.776	ENSLOCG00000003746	lsm14b	56	44.928	Lepisosteus_oculatus
ENSKMAG00000012834	-	88	44.976	ENSLAFG00000007492	LSM14B	58	44.762	Loxodonta_africana
ENSKMAG00000012834	-	88	43.062	ENSMFAG00000041479	LSM14B	52	42.857	Macaca_fascicularis
ENSKMAG00000012834	-	88	43.062	ENSMMUG00000014084	LSM14B	52	42.857	Macaca_mulatta
ENSKMAG00000012834	-	88	43.062	ENSMNEG00000045573	LSM14B	52	42.857	Macaca_nemestrina
ENSKMAG00000012834	-	88	42.105	ENSMLEG00000040895	LSM14B	58	41.905	Mandrillus_leucophaeus
ENSKMAG00000012834	-	86	39.500	ENSMAMG00000020539	lsm14b	52	41.089	Mastacembelus_armatus
ENSKMAG00000012834	-	98	57.391	ENSMAMG00000024124	LSM14B	52	56.796	Mastacembelus_armatus
ENSKMAG00000012834	-	89	58.019	ENSMZEG00005026001	LSM14B	55	57.619	Maylandia_zebra
ENSKMAG00000012834	-	90	53.659	ENSMZEG00005026087	-	66	52.764	Maylandia_zebra
ENSKMAG00000012834	-	90	54.146	ENSMZEG00005002688	-	66	53.266	Maylandia_zebra
ENSKMAG00000012834	-	86	42.424	ENSMZEG00005000987	lsm14b	52	35.047	Maylandia_zebra
ENSKMAG00000012834	-	69	62.264	ENSMZEG00005009676	-	52	61.438	Maylandia_zebra
ENSKMAG00000012834	-	88	41.860	ENSMGAG00000005300	LSM14B	57	42.523	Meleagris_gallopavo
ENSKMAG00000012834	-	88	44.976	ENSMAUG00000020700	Lsm14b	65	44.286	Mesocricetus_auratus
ENSKMAG00000012834	-	88	44.019	ENSMICG00000014675	LSM14B	52	44.286	Microcebus_murinus
ENSKMAG00000012834	-	88	44.976	ENSMOCG00000020600	Lsm14b	65	44.286	Microtus_ochrogaster
ENSKMAG00000012834	-	86	37.850	ENSMMOG00000020042	lsm14b	55	36.364	Mola_mola
ENSKMAG00000012834	-	88	49.763	ENSMMOG00000017321	LSM14B	50	49.524	Mola_mola
ENSKMAG00000012834	-	88	44.498	ENSMODG00000016690	LSM14B	65	44.286	Monodelphis_domestica
ENSKMAG00000012834	-	95	41.284	ENSMALG00000004783	lsm14b	50	39.109	Monopterus_albus
ENSKMAG00000012834	-	89	64.563	ENSMALG00000022251	LSM14B	53	64.216	Monopterus_albus
ENSKMAG00000012834	-	88	45.024	MGP_CAROLIEiJ_G0024770	Lsm14b	52	44.340	Mus_caroli
ENSKMAG00000012834	-	88	45.498	ENSMUSG00000039108	Lsm14b	65	44.811	Mus_musculus
ENSKMAG00000012834	-	88	45.024	MGP_PahariEiJ_G0026214	Lsm14b	52	44.340	Mus_pahari
ENSKMAG00000012834	-	88	45.024	MGP_SPRETEiJ_G0025693	Lsm14b	52	44.340	Mus_spretus
ENSKMAG00000012834	-	88	44.498	ENSMPUG00000007584	LSM14B	50	44.286	Mustela_putorius_furo
ENSKMAG00000012834	-	86	42.439	ENSMLUG00000000304	LSM14B	52	42.857	Myotis_lucifugus
ENSKMAG00000012834	-	90	43.256	ENSNGAG00000016550	Lsm14b	87	43.333	Nannospalax_galili
ENSKMAG00000012834	-	88	43.062	ENSNLEG00000015757	LSM14B	58	42.857	Nomascus_leucogenys
ENSKMAG00000012834	-	88	43.541	ENSODEG00000004099	LSM14B	65	43.333	Octodon_degus
ENSKMAG00000012834	-	86	42.929	ENSONIG00000020318	lsm14b	53	36.771	Oreochromis_niloticus
ENSKMAG00000012834	-	88	44.076	ENSOCUG00000006279	LSM14B	58	43.868	Oryctolagus_cuniculus
ENSKMAG00000012834	-	89	59.024	ENSORLG00000028353	LSM14B	53	57.143	Oryzias_latipes
ENSKMAG00000012834	-	86	36.275	ENSORLG00000013525	lsm14b	51	35.407	Oryzias_latipes
ENSKMAG00000012834	-	89	48.529	ENSORLG00020018191	-	63	47.030	Oryzias_latipes_hni
ENSKMAG00000012834	-	86	35.784	ENSORLG00020020553	lsm14b	51	35.407	Oryzias_latipes_hni
ENSKMAG00000012834	-	89	60.488	ENSORLG00015013157	LSM14B	53	58.621	Oryzias_latipes_hsok
ENSKMAG00000012834	-	86	40.394	ENSORLG00015016862	lsm14b	51	35.407	Oryzias_latipes_hsok
ENSKMAG00000012834	-	56	60.938	ENSOMEG00000000171	-	72	45.545	Oryzias_melastigma
ENSKMAG00000012834	-	86	40.394	ENSOMEG00000023917	lsm14b	51	35.885	Oryzias_melastigma
ENSKMAG00000012834	-	88	43.062	ENSOARG00000014706	LSM14B	51	42.857	Ovis_aries
ENSKMAG00000012834	-	88	43.062	ENSPPAG00000035799	LSM14B	54	42.857	Pan_paniscus
ENSKMAG00000012834	-	88	45.455	ENSPPRG00000009197	LSM14B	52	45.238	Panthera_pardus
ENSKMAG00000012834	-	88	45.455	ENSPTIG00000021518	LSM14B	67	45.238	Panthera_tigris_altaica
ENSKMAG00000012834	-	88	43.062	ENSPTRG00000013696	LSM14B	52	42.857	Pan_troglodytes
ENSKMAG00000012834	-	88	42.584	ENSPANG00000011747	LSM14B	52	42.381	Papio_anubis
ENSKMAG00000012834	-	88	48.276	ENSPKIG00000003275	lsm14b	51	48.039	Paramormyrops_kingsleyae
ENSKMAG00000012834	-	88	43.602	ENSPSIG00000014762	LSM14B	65	40.807	Pelodiscus_sinensis
ENSKMAG00000012834	-	88	44.498	ENSPEMG00000017688	Lsm14b	65	44.286	Peromyscus_maniculatus_bairdii
ENSKMAG00000012834	-	88	44.498	ENSPCIG00000013405	LSM14B	52	44.286	Phascolarctos_cinereus
ENSKMAG00000012834	-	95	40.909	ENSPFOG00000005631	lsm14b	52	35.377	Poecilia_formosa
ENSKMAG00000012834	-	100	61.472	ENSPLAG00000005793	LSM14B	52	58.128	Poecilia_latipinna
ENSKMAG00000012834	-	95	40.909	ENSPLAG00000002449	lsm14b	51	36.058	Poecilia_latipinna
ENSKMAG00000012834	-	85	60.513	ENSPMEG00000022953	LSM14B	52	58.621	Poecilia_mexicana
ENSKMAG00000012834	-	87	41.379	ENSPMEG00000000745	lsm14b	51	36.058	Poecilia_mexicana
ENSKMAG00000012834	-	97	57.589	ENSPREG00000007828	LSM14B	66	55.172	Poecilia_reticulata
ENSKMAG00000012834	-	88	45.238	ENSPCOG00000013625	LSM14B	52	45.024	Propithecus_coquereli
ENSKMAG00000012834	-	86	47.030	ENSPNAG00000012777	lsm14b	52	47.115	Pygocentrus_nattereri
ENSKMAG00000012834	-	88	43.810	ENSRBIG00000033461	LSM14B	58	43.333	Rhinopithecus_bieti
ENSKMAG00000012834	-	88	44.393	ENSRROG00000042949	LSM14B	65	43.333	Rhinopithecus_roxellana
ENSKMAG00000012834	-	88	44.976	ENSSHAG00000015528	LSM14B	65	44.762	Sarcophilus_harrisii
ENSKMAG00000012834	-	85	46.040	ENSSFOG00015004627	lsm14b	53	46.154	Scleropages_formosus
ENSKMAG00000012834	-	97	62.832	ENSSMAG00000000135	LSM14B	53	62.621	Scophthalmus_maximus
ENSKMAG00000012834	-	86	38.579	ENSSMAG00000012725	lsm14b	52	38.916	Scophthalmus_maximus
ENSKMAG00000012834	-	86	43.000	ENSSDUG00000020977	lsm14b	52	41.627	Seriola_dumerili
ENSKMAG00000012834	-	100	67.241	ENSSDUG00000022770	LSM14B	54	68.137	Seriola_dumerili
ENSKMAG00000012834	-	100	56.170	ENSSLDG00000011354	-	70	58.454	Seriola_lalandi_dorsalis
ENSKMAG00000012834	-	86	41.176	ENSSARG00000007749	-	94	41.176	Sorex_araneus
ENSKMAG00000012834	-	88	44.811	ENSSPUG00000014360	LSM14B	50	42.105	Sphenodon_punctatus
ENSKMAG00000012834	-	98	51.982	ENSSPAG00000018854	-	70	49.754	Stegastes_partitus
ENSKMAG00000012834	-	88	42.654	ENSSSCG00000026052	LSM14B	65	42.453	Sus_scrofa
ENSKMAG00000012834	-	88	43.333	ENSTGUG00000007884	LSM14B	58	43.128	Taeniopygia_guttata
ENSKMAG00000012834	-	96	42.009	ENSTRUG00000011354	lsm14b	51	41.089	Takifugu_rubripes
ENSKMAG00000012834	-	89	54.634	ENSTRUG00000001529	LSM14B	52	54.187	Takifugu_rubripes
ENSKMAG00000012834	-	88	40.278	ENSTNIG00000002445	lsm14b	52	40.092	Tetraodon_nigroviridis
ENSKMAG00000012834	-	88	45.714	ENSUAMG00000025298	LSM14B	52	45.498	Ursus_americanus
ENSKMAG00000012834	-	88	45.714	ENSUMAG00000000480	LSM14B	52	45.498	Ursus_maritimus
ENSKMAG00000012834	-	88	45.455	ENSVVUG00000015920	LSM14B	65	45.238	Vulpes_vulpes
ENSKMAG00000012834	-	76	38.378	ENSXETG00000001997	lsm14b	52	40.000	Xenopus_tropicalis
ENSKMAG00000012834	-	86	40.488	ENSXMAG00000010013	lsm14b	51	38.571	Xiphophorus_maculatus