EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012850 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 390 bases
Position: chrLWHD01000014.1:3598791-3599180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017227	SM-ATX	PF14438.6	9.6e-09	1	1
ENSKMAP00000017227	LSM14	PF12701.7	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017464	-	291	-	ENSKMAP00000017227	96 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000012850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012850	-	98	97.872	ENSKMAG00000016674	-	85	97.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012850	-	100	77.320	ENSAPOG00000009997	-	90	77.320	Acanthochromis_polyacanthus
ENSKMAG00000012850	-	99	86.458	ENSACIG00000003134	-	78	86.458	Amphilophus_citrinellus
ENSKMAG00000012850	-	99	83.333	ENSAPEG00000013779	-	95	83.333	Amphiprion_percula
ENSKMAG00000012850	-	89	88.235	ENSATEG00000015882	-	97	88.235	Anabas_testudineus
ENSKMAG00000012850	-	99	63.542	ENSCVAG00000005570	-	99	63.542	Cyprinodon_variegatus
ENSKMAG00000012850	-	99	90.625	ENSCVAG00000012411	-	99	90.625	Cyprinodon_variegatus
ENSKMAG00000012850	-	99	90.625	ENSGAFG00000013718	-	99	90.625	Gambusia_affinis
ENSKMAG00000012850	-	98	65.263	ENSHBUG00000011864	-	71	65.263	Haplochromis_burtoni
ENSKMAG00000012850	-	97	81.915	ENSHBUG00000012323	-	90	81.915	Haplochromis_burtoni
ENSKMAG00000012850	-	94	62.637	ENSHCOG00000004862	-	83	62.637	Hippocampus_comes
ENSKMAG00000012850	-	98	66.316	ENSLBEG00000016427	lsm14b	66	66.316	Labrus_bergylta
ENSKMAG00000012850	-	99	85.417	ENSLBEG00000007971	-	92	85.417	Labrus_bergylta
ENSKMAG00000012850	-	98	68.421	ENSNGAG00000016305	-	76	68.421	Nannospalax_galili
ENSKMAG00000012850	-	97	80.851	ENSNBRG00000022370	-	90	80.851	Neolamprologus_brichardi
ENSKMAG00000012850	-	98	66.316	ENSNBRG00000022606	-	71	66.316	Neolamprologus_brichardi
ENSKMAG00000012850	-	99	82.653	ENSORLG00020018184	-	99	82.653	Oryzias_latipes_hni
ENSKMAG00000012850	-	82	84.810	ENSOMEG00000007241	-	95	84.810	Oryzias_melastigma
ENSKMAG00000012850	-	99	70.833	ENSPKIG00000003275	lsm14b	89	70.833	Paramormyrops_kingsleyae
ENSKMAG00000012850	-	98	66.316	ENSPMGG00000014569	lsm14b	59	66.316	Periophthalmus_magnuspinnatus
ENSKMAG00000012850	-	84	76.543	ENSPMGG00000004595	-	82	76.543	Periophthalmus_magnuspinnatus
ENSKMAG00000012850	-	84	90.123	ENSPREG00000007817	-	93	90.123	Poecilia_reticulata
ENSKMAG00000012850	-	99	63.542	ENSPREG00000016484	-	62	63.542	Poecilia_reticulata
ENSKMAG00000012850	-	98	65.263	ENSPNYG00000019601	-	71	65.263	Pundamilia_nyererei
ENSKMAG00000012850	-	97	81.915	ENSPNYG00000021706	-	89	81.915	Pundamilia_nyererei
ENSKMAG00000012850	-	88	90.476	ENSSLDG00000011341	-	91	90.476	Seriola_lalandi_dorsalis
ENSKMAG00000012850	-	99	61.053	ENSSLDG00000011706	-	96	61.053	Seriola_lalandi_dorsalis
ENSKMAG00000012850	-	88	90.476	ENSSLDG00000012686	-	91	90.476	Seriola_lalandi_dorsalis
ENSKMAG00000012850	-	98	84.211	ENSSPAG00000018837	-	94	84.211	Stegastes_partitus
ENSKMAG00000012850	-	94	67.033	ENSXCOG00000017365	-	92	67.033	Xiphophorus_couchianus
ENSKMAG00000012850	-	91	88.506	ENSXCOG00000011423	-	96	88.506	Xiphophorus_couchianus
ENSKMAG00000012850	-	91	89.655	ENSXMAG00000015481	-	96	89.655	Xiphophorus_maculatus