EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000012909 (Gene tree)
Gene ID: 108233176
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 624-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 8468 bases
Position: chrLWHD01000020.1:2810149-2818616
Accession: 108233176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	1	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	2	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	3	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	4	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	5	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	6	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	7	8
ENSKMAP00000017327	zf-C2H2	PF00096.26	3.7e-55	8	8
ENSKMAP00000017323	zf-C2H2	PF00096.26	8.7e-27	1	3
ENSKMAP00000017323	zf-C2H2	PF00096.26	8.7e-27	2	3
ENSKMAP00000017323	zf-C2H2	PF00096.26	8.7e-27	3	3
ENSKMAP00000017327	zf-met	PF12874.7	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017561	-	1299	-	ENSKMAP00000017323	432 (aa)	-	-
ENSKMAT00000017565	-	3872	XM_017411460	ENSKMAP00000017327	1151 (aa)	XP_017266949	UPI0007F8A147

Gene Model

Click here to download ENSKMAG00000012909's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000012909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000012909	-	57	40.000	ENSKMAG00000017443	-	97	42.623
ENSKMAG00000012909	-	61	38.614	ENSKMAG00000021206	snai1a	59	38.614
ENSKMAG00000012909	-	88	30.874	ENSKMAG00000007892	-	83	32.456
ENSKMAG00000012909	-	87	39.109	ENSKMAG00000002583	-	99	38.914
ENSKMAG00000012909	-	86	32.028	ENSKMAG00000001084	-	81	44.330
ENSKMAG00000012909	-	91	46.053	ENSKMAG00000003940	-	98	42.331
ENSKMAG00000012909	-	87	34.884	ENSKMAG00000013290	-	95	36.614
ENSKMAG00000012909	-	92	39.286	ENSKMAG00000020025	-	97	39.286
ENSKMAG00000012909	-	90	37.555	ENSKMAG00000018648	-	62	37.555
ENSKMAG00000012909	-	59	33.520	ENSKMAG00000008157	patz1	62	32.979
ENSKMAG00000012909	-	86	49.153	ENSKMAG00000019180	-	61	49.153
ENSKMAG00000012909	-	88	38.667	ENSKMAG00000006633	-	85	38.667
ENSKMAG00000012909	-	84	30.409	ENSKMAG00000009682	-	76	34.437
ENSKMAG00000012909	-	87	43.750	ENSKMAG00000015304	-	75	43.750
ENSKMAG00000012909	-	86	41.040	ENSKMAG00000002606	-	81	42.534
ENSKMAG00000012909	-	94	40.887	ENSKMAG00000007657	-	90	40.000
ENSKMAG00000012909	-	86	46.667	ENSKMAG00000009979	-	87	46.667
ENSKMAG00000012909	-	91	41.026	ENSKMAG00000000689	-	99	40.659
ENSKMAG00000012909	-	90	40.299	ENSKMAG00000000688	-	98	40.299
ENSKMAG00000012909	-	88	35.211	ENSKMAG00000006392	-	67	36.047
ENSKMAG00000012909	-	87	31.818	ENSKMAG00000010133	znf526	67	32.461
ENSKMAG00000012909	-	88	32.992	ENSKMAG00000021184	-	92	32.992
ENSKMAG00000012909	-	96	41.011	ENSKMAG00000006231	-	93	42.254
ENSKMAG00000012909	-	59	39.264	ENSKMAG00000014002	si:ch211-79k12.2	95	30.137
ENSKMAG00000012909	-	86	37.008	ENSKMAG00000002963	zbtb48	66	34.810
ENSKMAG00000012909	-	87	43.519	ENSKMAG00000002032	-	59	42.857
ENSKMAG00000012909	-	86	32.087	ENSKMAG00000008319	-	87	38.095
ENSKMAG00000012909	-	86	38.202	ENSKMAG00000006563	-	60	38.202
ENSKMAG00000012909	-	88	45.198	ENSKMAG00000002448	-	90	45.198
ENSKMAG00000012909	-	91	42.927	ENSKMAG00000021716	-	67	40.933
ENSKMAG00000012909	-	88	40.316	ENSKMAG00000017095	-	72	40.316
ENSKMAG00000012909	-	88	36.905	ENSKMAG00000018266	-	81	37.838
ENSKMAG00000012909	-	86	39.303	ENSKMAG00000004080	zbtb17	75	39.303
ENSKMAG00000012909	-	85	36.000	ENSKMAG00000000387	-	75	40.807
ENSKMAG00000012909	-	88	38.462	ENSKMAG00000018636	-	90	40.083
ENSKMAG00000012909	-	86	39.901	ENSKMAG00000010903	-	63	43.379
ENSKMAG00000012909	-	87	50.000	ENSKMAG00000016333	-	97	48.387
ENSKMAG00000012909	-	82	43.269	ENSKMAG00000008316	-	88	43.443
ENSKMAG00000012909	-	97	35.686	ENSKMAG00000006450	-	80	35.686
ENSKMAG00000012909	-	86	36.965	ENSKMAG00000008262	-	78	35.955
ENSKMAG00000012909	-	91	33.984	ENSKMAG00000004988	-	86	33.884
ENSKMAG00000012909	-	94	38.509	ENSKMAG00000000597	-	95	41.096
ENSKMAG00000012909	-	75	36.905	ENSKMAG00000009522	-	80	36.686
ENSKMAG00000012909	-	92	36.264	ENSKMAG00000000668	-	91	33.578
ENSKMAG00000012909	-	86	38.333	ENSKMAG00000020046	-	77	37.619
ENSKMAG00000012909	-	86	31.405	ENSKMAG00000001192	-	82	32.353
ENSKMAG00000012909	-	85	40.625	ENSKMAG00000007922	-	85	40.625
ENSKMAG00000012909	-	59	50.000	ENSKMAG00000007672	-	64	50.000
ENSKMAG00000012909	-	88	35.676	ENSKMAG00000016588	-	57	36.313
ENSKMAG00000012909	-	88	44.560	ENSKMAG00000001357	-	68	44.041
ENSKMAG00000012909	-	87	30.239	ENSKMAG00000009015	-	87	32.975
ENSKMAG00000012909	-	87	38.919	ENSKMAG00000018656	si:dkey-77f5.14	98	47.541
ENSKMAG00000012909	-	94	41.361	ENSKMAG00000010499	-	56	41.361
ENSKMAG00000012909	-	95	36.296	ENSKMAG00000000543	-	100	39.759
ENSKMAG00000012909	-	57	37.931	ENSKMAG00000000549	-	57	36.898
ENSKMAG00000012909	-	84	35.393	ENSKMAG00000000556	-	53	37.500
ENSKMAG00000012909	-	60	31.915	ENSKMAG00000022244	znf131	51	31.343
ENSKMAG00000012909	-	88	39.869	ENSKMAG00000002022	-	61	40.444
ENSKMAG00000012909	-	86	37.984	ENSKMAG00000000371	-	86	38.288
ENSKMAG00000012909	-	92	44.882	ENSKMAG00000002093	-	91	44.882
ENSKMAG00000012909	-	87	37.500	ENSKMAG00000011982	znf646	89	37.500
ENSKMAG00000012909	-	58	33.929	ENSKMAG00000018087	scrt2	52	33.824
ENSKMAG00000012909	-	86	31.117	ENSKMAG00000001171	-	79	30.480
ENSKMAG00000012909	-	87	40.952	ENSKMAG00000005747	-	95	40.000
ENSKMAG00000012909	-	94	40.881	ENSKMAG00000001091	-	62	46.763
ENSKMAG00000012909	-	95	40.698	ENSKMAG00000011031	-	71	40.698
ENSKMAG00000012909	-	90	39.683	ENSKMAG00000003121	-	93	39.683
ENSKMAG00000012909	-	89	37.333	ENSKMAG00000011441	-	81	37.333
ENSKMAG00000012909	-	86	31.507	ENSKMAG00000020339	-	63	33.772
ENSKMAG00000012909	-	88	30.592	ENSKMAG00000000462	-	99	41.912
ENSKMAG00000012909	-	87	37.333	ENSKMAG00000007699	-	79	30.970
ENSKMAG00000012909	-	84	35.741	ENSKMAG00000013843	-	73	35.333
ENSKMAG00000012909	-	57	32.184	ENSKMAG00000014184	-	55	32.184
ENSKMAG00000012909	-	87	39.130	ENSKMAG00000006327	si:ch211-216l23.1	84	30.364
ENSKMAG00000012909	-	86	31.351	ENSKMAG00000006773	-	83	37.745
ENSKMAG00000012909	-	97	43.243	ENSKMAG00000021817	znf236	78	43.243
ENSKMAG00000012909	-	90	48.305	ENSKMAG00000003766	-	91	48.305
ENSKMAG00000012909	-	87	36.078	ENSKMAG00000003186	-	89	36.078
ENSKMAG00000012909	-	89	39.485	ENSKMAG00000013239	-	74	36.923
ENSKMAG00000012909	-	86	40.741	ENSKMAG00000000702	-	98	40.741
ENSKMAG00000012909	-	95	41.844	ENSKMAG00000019828	-	97	41.844
ENSKMAG00000012909	-	82	42.000	ENSKMAG00000006686	znf341	52	33.594
ENSKMAG00000012909	-	86	32.766	ENSKMAG00000017553	zbtb16a	51	32.766
ENSKMAG00000012909	-	98	34.151	ENSKMAG00000003402	-	97	34.151
ENSKMAG00000012909	-	83	35.754	ENSKMAG00000000520	-	55	36.041
ENSKMAG00000012909	-	85	32.203	ENSKMAG00000000529	-	75	33.441
ENSKMAG00000012909	-	52	41.573	ENSKMAG00000003176	-	98	41.573
ENSKMAG00000012909	-	77	33.333	ENSKMAG00000018546	-	69	33.333
ENSKMAG00000012909	-	91	36.232	ENSKMAG00000013663	prdm5	73	36.585
ENSKMAG00000012909	-	83	34.783	ENSKMAG00000004290	-	71	33.803
ENSKMAG00000012909	-	91	40.708	ENSKMAG00000019130	-	93	44.928
ENSKMAG00000012909	-	88	35.484	ENSKMAG00000010330	zbtb47b	85	34.191
ENSKMAG00000012909	-	87	34.783	ENSKMAG00000017329	znf710b	52	34.783
ENSKMAG00000012909	-	86	36.872	ENSKMAG00000009648	-	85	38.806
ENSKMAG00000012909	-	90	32.031	ENSKMAG00000001996	-	96	40.157
ENSKMAG00000012909	-	87	41.089	ENSKMAG00000000718	-	99	40.000
ENSKMAG00000012909	-	87	32.018	ENSKMAG00000007249	znf319b	87	31.510
ENSKMAG00000012909	-	58	36.842	ENSKMAG00000005484	scrt1b	51	36.842
ENSKMAG00000012909	-	88	40.726	ENSKMAG00000005375	-	59	40.210
ENSKMAG00000012909	-	92	31.788	ENSKMAG00000000073	-	84	36.154
ENSKMAG00000012909	-	78	39.456	ENSKMAG00000016047	gfi1b	59	39.130
ENSKMAG00000012909	-	95	41.985	ENSKMAG00000000795	-	99	38.710
ENSKMAG00000012909	-	56	40.909	ENSKMAG00000014629	-	68	40.476
ENSKMAG00000012909	-	87	39.300	ENSKMAG00000011111	-	100	39.169
ENSKMAG00000012909	-	93	32.046	ENSKMAG00000007658	-	94	36.765
ENSKMAG00000012909	-	86	36.822	ENSKMAG00000013863	-	65	37.102
ENSKMAG00000012909	-	93	34.375	ENSKMAG00000000620	-	61	34.375
ENSKMAG00000012909	-	85	37.671	ENSKMAG00000021874	-	95	33.712
ENSKMAG00000012909	-	84	36.972	ENSKMAG00000009563	-	77	55.056
ENSKMAG00000012909	-	58	33.929	ENSKMAG00000009489	-	50	33.333
ENSKMAG00000012909	-	86	35.165	ENSKMAG00000014923	-	51	43.158
ENSKMAG00000012909	-	86	47.312	ENSKMAG00000000802	-	88	47.312
ENSKMAG00000012909	-	87	46.733	ENSKMAG00000012934	-	92	57.755
ENSKMAG00000012909	-	86	37.066	ENSKMAG00000012202	-	86	38.652
ENSKMAG00000012909	-	91	32.028	ENSKMAG00000001186	-	56	31.111
ENSKMAG00000012909	-	91	45.545	ENSKMAG00000013745	-	76	45.545
ENSKMAG00000012909	-	63	34.821	ENSKMAG00000005164	snai2	67	35.252
ENSKMAG00000012909	-	86	51.389	ENSKMAG00000021194	-	68	51.389
ENSKMAG00000012909	-	95	40.796	ENSKMAG00000010996	-	71	38.506
ENSKMAG00000012909	-	93	40.816	ENSKMAG00000003810	gfi1ab	54	42.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000012909	-	60	31.897	ENSACIG00000017166	-	64	31.897	Amphilophus_citrinellus
ENSKMAG00000012909	-	67	42.391	ENSAOCG00000018579	-	77	42.391	Amphiprion_ocellaris
ENSKMAG00000012909	-	82	35.146	ENSAPEG00000007889	-	77	37.327	Amphiprion_percula
ENSKMAG00000012909	-	86	35.849	ENSAPEG00000019755	-	87	39.286	Amphiprion_percula
ENSKMAG00000012909	-	58	38.012	ENSAMXG00000032845	-	56	38.012	Astyanax_mexicanus
ENSKMAG00000012909	-	87	33.333	WBGene00021374	Y37E11B.1	93	32.609	Caenorhabditis_elegans
ENSKMAG00000012909	-	91	39.759	ENSCING00000005713	-	77	39.759	Ciona_intestinalis
ENSKMAG00000012909	-	78	42.308	ENSCING00000003384	-	94	42.308	Ciona_intestinalis
ENSKMAG00000012909	-	90	33.333	ENSCING00000004861	zf(c2h2)-12	73	33.333	Ciona_intestinalis
ENSKMAG00000012909	-	88	34.158	ENSCING00000000529	zf(btb/c2h2)	56	33.990	Ciona_intestinalis
ENSKMAG00000012909	-	96	42.400	ENSCSAVG00000009574	-	100	40.860	Ciona_savignyi
ENSKMAG00000012909	-	87	30.100	ENSCSAVG00000005896	-	78	33.043	Ciona_savignyi
ENSKMAG00000012909	-	87	31.694	ENSCSAVG00000006729	-	69	30.649	Ciona_savignyi
ENSKMAG00000012909	-	82	42.268	ENSCSAVG00000003895	-	100	42.268	Ciona_savignyi
ENSKMAG00000012909	-	85	32.443	ENSCSEG00000005491	-	95	32.443	Cynoglossus_semilaevis
ENSKMAG00000012909	-	56	36.697	ENSCVAG00000002502	-	93	36.697	Cyprinodon_variegatus
ENSKMAG00000012909	-	88	30.769	ENSCVAG00000002295	-	79	41.758	Cyprinodon_variegatus
ENSKMAG00000012909	-	92	50.265	ENSCVAG00000016098	-	99	59.558	Cyprinodon_variegatus
ENSKMAG00000012909	-	59	39.007	FBgn0030012	CG18262	56	35.714	Drosophila_melanogaster
ENSKMAG00000012909	-	64	39.394	FBgn0028895	CG17328	57	37.607	Drosophila_melanogaster
ENSKMAG00000012909	-	93	33.898	FBgn0033934	CG17385	83	33.898	Drosophila_melanogaster
ENSKMAG00000012909	-	86	31.792	FBgn0037722	CG8319	62	32.273	Drosophila_melanogaster
ENSKMAG00000012909	-	96	42.105	ENSEBUG00000015522	-	71	42.105	Eptatretus_burgeri
ENSKMAG00000012909	-	87	40.496	ENSEBUG00000000735	-	95	40.496	Eptatretus_burgeri
ENSKMAG00000012909	-	88	48.624	ENSEBUG00000008392	-	75	48.624	Eptatretus_burgeri
ENSKMAG00000012909	-	92	41.111	ENSEBUG00000004841	-	84	41.111	Eptatretus_burgeri
ENSKMAG00000012909	-	96	53.114	ENSELUG00000020794	-	92	51.736	Esox_lucius
ENSKMAG00000012909	-	98	31.549	ENSELUG00000010454	-	94	30.739	Esox_lucius
ENSKMAG00000012909	-	99	33.402	ENSFHEG00000007344	-	98	33.402	Fundulus_heteroclitus
ENSKMAG00000012909	-	90	36.226	ENSFHEG00000013644	-	82	36.042	Fundulus_heteroclitus
ENSKMAG00000012909	-	89	34.058	ENSFHEG00000020889	-	72	35.317	Fundulus_heteroclitus
ENSKMAG00000012909	-	92	62.264	ENSFHEG00000003596	-	98	58.445	Fundulus_heteroclitus
ENSKMAG00000012909	-	97	37.705	ENSFHEG00000012990	-	93	37.705	Fundulus_heteroclitus
ENSKMAG00000012909	-	84	36.413	ENSGACG00000018415	-	99	36.066	Gasterosteus_aculeatus
ENSKMAG00000012909	-	89	44.444	ENSHCOG00000017437	-	76	41.667	Hippocampus_comes
ENSKMAG00000012909	-	56	37.624	ENSHCOG00000014887	-	67	43.750	Hippocampus_comes
ENSKMAG00000012909	-	87	37.681	ENSHCOG00000014881	-	71	36.782	Hippocampus_comes
ENSKMAG00000012909	-	86	32.685	ENSHCOG00000008181	-	75	30.405	Hippocampus_comes
ENSKMAG00000012909	-	78	35.119	ENSHCOG00000001313	-	59	35.119	Hippocampus_comes
ENSKMAG00000012909	-	58	34.259	ENSIPUG00000013526	-	88	31.818	Ictalurus_punctatus
ENSKMAG00000012909	-	69	33.566	ENSLBEG00000026573	-	78	33.566	Labrus_bergylta
ENSKMAG00000012909	-	89	39.247	ENSONIG00000007812	-	99	39.247	Oreochromis_niloticus
ENSKMAG00000012909	-	63	33.333	ENSONIG00000009894	-	100	33.058	Oreochromis_niloticus
ENSKMAG00000012909	-	84	36.196	ENSONIG00000003471	-	99	35.838	Oreochromis_niloticus
ENSKMAG00000012909	-	92	41.111	ENSONIG00000016416	-	98	41.304	Oreochromis_niloticus
ENSKMAG00000012909	-	90	38.150	ENSONIG00000003224	-	93	38.150	Oreochromis_niloticus
ENSKMAG00000012909	-	87	33.712	ENSORLG00015018254	-	92	39.024	Oryzias_latipes_hsok
ENSKMAG00000012909	-	84	32.601	ENSOMEG00000017673	-	69	34.062	Oryzias_melastigma
ENSKMAG00000012909	-	88	35.125	ENSPMGG00000010664	-	91	43.210	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	86	41.667	ENSPMGG00000000243	-	73	41.667	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	90	45.736	ENSPMGG00000022524	-	100	38.117	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	73	41.818	ENSPMGG00000000489	-	95	40.678	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	88	36.508	ENSPMGG00000000218	-	63	38.849	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	88	39.167	ENSPMGG00000000458	-	90	42.105	Periophthalmus_magnuspinnatus
ENSKMAG00000012909	-	86	42.500	ENSPMAG00000007983	-	99	40.580	Petromyzon_marinus
ENSKMAG00000012909	-	89	38.577	ENSPFOG00000002879	-	100	39.394	Poecilia_formosa
ENSKMAG00000012909	-	92	35.870	ENSPFOG00000020691	-	87	36.364	Poecilia_formosa
ENSKMAG00000012909	-	89	37.745	ENSPLAG00000006174	-	90	36.653	Poecilia_latipinna
ENSKMAG00000012909	-	57	40.741	ENSPLAG00000011254	-	57	42.308	Poecilia_latipinna
ENSKMAG00000012909	-	100	60.276	ENSPMEG00000019229	-	98	60.492	Poecilia_mexicana
ENSKMAG00000012909	-	90	34.659	ENSPMEG00000022676	-	100	38.528	Poecilia_mexicana
ENSKMAG00000012909	-	59	38.323	ENSPMEG00000007503	-	77	42.308	Poecilia_mexicana
ENSKMAG00000012909	-	100	60.569	ENSPREG00000007146	-	98	60.774	Poecilia_reticulata
ENSKMAG00000012909	-	59	36.464	ENSPREG00000015352	-	76	42.308	Poecilia_reticulata
ENSKMAG00000012909	-	86	31.266	ENSPREG00000016204	-	70	31.880	Poecilia_reticulata
ENSKMAG00000012909	-	87	33.333	ENSSMAG00000001359	-	93	32.353	Scophthalmus_maximus
ENSKMAG00000012909	-	89	42.262	ENSSDUG00000000946	-	97	39.779	Seriola_dumerili
ENSKMAG00000012909	-	80	33.636	ENSSDUG00000000871	-	90	33.636	Seriola_dumerili
ENSKMAG00000012909	-	75	33.571	ENSSLDG00000002515	-	76	35.714	Seriola_lalandi_dorsalis
ENSKMAG00000012909	-	83	31.250	ENSSLDG00000015796	-	71	31.250	Seriola_lalandi_dorsalis
ENSKMAG00000012909	-	93	31.373	ENSTRUG00000019941	-	52	31.373	Takifugu_rubripes
ENSKMAG00000012909	-	68	31.694	ENSTNIG00000008154	-	99	36.245	Tetraodon_nigroviridis
ENSKMAG00000012909	-	83	43.299	ENSXCOG00000005697	-	99	43.299	Xiphophorus_couchianus
ENSKMAG00000012909	-	62	37.278	ENSXMAG00000022242	-	75	40.741	Xiphophorus_maculatus