EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013113 (Gene tree)
Gene ID: 108231075
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 17761 bases
Position: chrLWHD01000010.1:2822003-2839763
Accession: 108231075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017608	AF-4	PF05110.13	3.7e-277	1	2
ENSKMAP00000017608	AF-4	PF05110.13	3.7e-277	2	2
ENSKMAP00000017640	AF-4	PF05110.13	1.2e-195	1	4
ENSKMAP00000017640	AF-4	PF05110.13	1.2e-195	2	4
ENSKMAP00000017640	AF-4	PF05110.13	1.2e-195	3	4
ENSKMAP00000017640	AF-4	PF05110.13	1.2e-195	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017885	-	3045	-	ENSKMAP00000017640	1014 (aa)	-	-
ENSKMAT00000017852	-	5919	XM_017407923	ENSKMAP00000017608	1128 (aa)	XP_017263412	UPI0007F8BB75

Gene Model

Click here to download ENSKMAG00000013113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013113	-	70	35.817	ENSG00000172493	AFF1	97	35.593	Homo_sapiens
ENSKMAG00000013113	-	53	54.688	ENSG00000144218	AFF3	96	43.017	Homo_sapiens
ENSKMAG00000013113	-	53	42.400	ENSG00000155966	AFF2	80	31.880	Homo_sapiens
ENSKMAG00000013113	-	100	61.655	ENSAPOG00000002994	-	100	61.233	Acanthochromis_polyacanthus
ENSKMAG00000013113	-	70	35.322	ENSAMEG00000003337	AFF1	99	31.402	Ailuropoda_melanoleuca
ENSKMAG00000013113	-	62	31.757	ENSACIG00000022732	aff2	72	33.030	Amphilophus_citrinellus
ENSKMAG00000013113	-	85	60.158	ENSACIG00000021066	-	97	60.158	Amphilophus_citrinellus
ENSKMAG00000013113	-	100	62.489	ENSAOCG00000020283	-	100	61.981	Amphiprion_ocellaris
ENSKMAG00000013113	-	100	62.437	ENSAPEG00000018794	-	100	61.929	Amphiprion_percula
ENSKMAG00000013113	-	90	85.859	ENSATEG00000015552	-	76	85.859	Anabas_testudineus
ENSKMAG00000013113	-	99	54.693	ENSACLG00000002905	-	99	54.919	Astatotilapia_calliptera
ENSKMAG00000013113	-	58	31.783	ENSAMXG00000000387	aff2	57	41.700	Astyanax_mexicanus
ENSKMAG00000013113	-	52	34.383	ENSBTAG00000018488	AFF1	70	36.490	Bos_taurus
ENSKMAG00000013113	-	53	50.794	ENSBTAG00000012449	AFF3	52	50.794	Bos_taurus
ENSKMAG00000013113	-	53	54.688	ENSCJAG00000010071	AFF3	52	54.688	Callithrix_jacchus
ENSKMAG00000013113	-	53	33.894	ENSCAFG00000009476	AFF1	51	33.813	Canis_familiaris
ENSKMAG00000013113	-	53	55.556	ENSCPOG00000006346	AFF3	61	58.065	Cavia_porcellus
ENSKMAG00000013113	-	53	54.688	ENSCATG00000045196	AFF3	53	53.968	Cercocebus_atys
ENSKMAG00000013113	-	53	53.968	ENSCLAG00000017100	AFF3	65	53.968	Chinchilla_lanigera
ENSKMAG00000013113	-	100	52.377	ENSCVAG00000015626	-	100	53.149	Cyprinodon_variegatus
ENSKMAG00000013113	-	59	42.745	ENSEBUG00000012097	aff4	57	41.569	Eptatretus_burgeri
ENSKMAG00000013113	-	88	64.865	ENSELUG00000019953	-	94	54.237	Esox_lucius
ENSKMAG00000013113	-	54	41.288	ENSELUG00000013368	aff2	50	42.085	Esox_lucius
ENSKMAG00000013113	-	69	32.199	ENSFCAG00000029975	AFF3	52	54.688	Felis_catus
ENSKMAG00000013113	-	69	36.634	ENSFCAG00000029806	AFF1	69	35.766	Felis_catus
ENSKMAG00000013113	-	51	52.459	ENSFALG00000008916	AFF4	54	52.459	Ficedula_albicollis
ENSKMAG00000013113	-	79	54.116	ENSFHEG00000003521	-	100	52.793	Fundulus_heteroclitus
ENSKMAG00000013113	-	99	51.568	ENSGACG00000016333	-	100	57.219	Gasterosteus_aculeatus
ENSKMAG00000013113	-	70	35.731	ENSGGOG00000008497	AFF1	70	36.211	Gorilla_gorilla
ENSKMAG00000013113	-	53	54.688	ENSGGOG00000034914	AFF3	53	53.968	Gorilla_gorilla
ENSKMAG00000013113	-	100	54.561	ENSHBUG00000005828	-	100	54.786	Haplochromis_burtoni
ENSKMAG00000013113	-	94	57.692	ENSHCOG00000000539	-	89	57.692	Hippocampus_comes
ENSKMAG00000013113	-	50	34.966	ENSIPUG00000015259	-	74	61.224	Ictalurus_punctatus
ENSKMAG00000013113	-	53	52.381	ENSSTOG00000012140	AFF3	57	54.839	Ictidomys_tridecemlineatus
ENSKMAG00000013113	-	53	52.381	ENSJJAG00000013155	Aff3	61	54.839	Jaculus_jaculus
ENSKMAG00000013113	-	90	86.000	ENSLBEG00000016928	-	82	80.488	Labrus_bergylta
ENSKMAG00000013113	-	78	37.407	ENSLOCG00000004025	AFF1	52	39.203	Lepisosteus_oculatus
ENSKMAG00000013113	-	50	42.570	ENSLAFG00000018691	AFF2	91	30.645	Loxodonta_africana
ENSKMAG00000013113	-	53	53.968	ENSMFAG00000031640	AFF3	53	53.968	Macaca_fascicularis
ENSKMAG00000013113	-	68	34.860	ENSMLEG00000039099	AFF1	70	35.407	Mandrillus_leucophaeus
ENSKMAG00000013113	-	91	81.579	ENSMAMG00000016189	-	99	57.119	Mastacembelus_armatus
ENSKMAG00000013113	-	99	54.778	ENSMZEG00005020442	-	99	55.004	Maylandia_zebra
ENSKMAG00000013113	-	71	36.150	ENSMAUG00000010241	Aff1	69	36.124	Mesocricetus_auratus
ENSKMAG00000013113	-	52	43.568	ENSMODG00000020745	AFF1	67	37.376	Monodelphis_domestica
ENSKMAG00000013113	-	100	58.179	ENSMALG00000002436	-	99	58.059	Monopterus_albus
ENSKMAG00000013113	-	53	53.968	MGP_CAROLIEiJ_G0014063	Aff3	53	53.968	Mus_caroli
ENSKMAG00000013113	-	70	36.160	MGP_CAROLIEiJ_G0027469	Aff1	69	34.360	Mus_caroli
ENSKMAG00000013113	-	52	36.154	ENSMUSG00000029313	Aff1	68	37.157	Mus_musculus
ENSKMAG00000013113	-	69	32.124	ENSMUSG00000037138	Aff3	52	56.452	Mus_musculus
ENSKMAG00000013113	-	69	32.558	MGP_PahariEiJ_G0027310	Aff3	53	53.968	Mus_pahari
ENSKMAG00000013113	-	70	36.683	MGP_PahariEiJ_G0017247	Aff1	68	36.543	Mus_pahari
ENSKMAG00000013113	-	53	54.688	MGP_SPRETEiJ_G0014867	Aff3	53	53.968	Mus_spretus
ENSKMAG00000013113	-	52	34.293	ENSMPUG00000002270	AFF1	81	34.228	Mustela_putorius_furo
ENSKMAG00000013113	-	69	32.267	ENSNGAG00000002408	Aff3	52	56.452	Nannospalax_galili
ENSKMAG00000013113	-	50	54.688	ENSNLEG00000014317	AFF3	51	54.688	Nomascus_leucogenys
ENSKMAG00000013113	-	100	51.382	ENSONIG00000007636	-	88	55.000	Oreochromis_niloticus
ENSKMAG00000013113	-	65	67.164	ENSOANG00000013624	AFF1	54	67.164	Ornithorhynchus_anatinus
ENSKMAG00000013113	-	69	32.804	ENSOCUG00000009532	AFF3	52	54.688	Oryctolagus_cuniculus
ENSKMAG00000013113	-	71	77.465	ENSORLG00000006428	-	99	75.342	Oryzias_latipes
ENSKMAG00000013113	-	84	75.342	ENSORLG00020003991	-	99	75.342	Oryzias_latipes_hni
ENSKMAG00000013113	-	84	75.342	ENSORLG00015009287	-	99	75.342	Oryzias_latipes_hsok
ENSKMAG00000013113	-	75	83.824	ENSOMEG00000005799	-	99	74.390	Oryzias_melastigma
ENSKMAG00000013113	-	52	34.606	ENSOARG00000004522	AFF1	70	36.215	Ovis_aries
ENSKMAG00000013113	-	70	35.971	ENSPPAG00000029196	AFF1	70	35.971	Pan_paniscus
ENSKMAG00000013113	-	50	54.688	ENSPPAG00000032057	AFF3	51	54.688	Pan_paniscus
ENSKMAG00000013113	-	53	33.741	ENSPPRG00000023590	AFF1	51	33.656	Panthera_pardus
ENSKMAG00000013113	-	69	32.292	ENSPPRG00000014330	AFF3	53	53.968	Panthera_pardus
ENSKMAG00000013113	-	69	36.139	ENSPTIG00000011838	AFF1	57	52.800	Panthera_tigris_altaica
ENSKMAG00000013113	-	55	67.742	ENSPTRG00000016255	AFF1	62	67.742	Pan_troglodytes
ENSKMAG00000013113	-	54	54.688	ENSPTRG00000012281	AFF3	54	53.968	Pan_troglodytes
ENSKMAG00000013113	-	53	54.688	ENSPANG00000018693	AFF3	53	53.968	Papio_anubis
ENSKMAG00000013113	-	57	58.431	ENSPKIG00000007777	-	56	59.274	Paramormyrops_kingsleyae
ENSKMAG00000013113	-	70	37.559	ENSPSIG00000003759	AFF1	71	37.559	Pelodiscus_sinensis
ENSKMAG00000013113	-	69	32.974	ENSPEMG00000014802	Aff3	61	53.226	Peromyscus_maniculatus_bairdii
ENSKMAG00000013113	-	100	55.850	ENSPFOG00000004581	-	100	55.689	Poecilia_formosa
ENSKMAG00000013113	-	95	54.324	ENSPLAG00000012910	-	100	54.332	Poecilia_latipinna
ENSKMAG00000013113	-	54	48.052	ENSPLAG00000005101	aff2	62	48.052	Poecilia_latipinna
ENSKMAG00000013113	-	65	53.281	ENSPMEG00000020100	-	92	54.103	Poecilia_mexicana
ENSKMAG00000013113	-	100	55.565	ENSPREG00000003514	-	100	54.974	Poecilia_reticulata
ENSKMAG00000013113	-	70	35.971	ENSPPYG00000014910	AFF1	69	33.724	Pongo_abelii
ENSKMAG00000013113	-	53	54.688	ENSPPYG00000012096	AFF3	53	54.688	Pongo_abelii
ENSKMAG00000013113	-	53	54.688	ENSPCOG00000016986	AFF3	53	53.968	Propithecus_coquereli
ENSKMAG00000013113	-	58	45.055	ENSPVAG00000014455	AFF1	50	68.657	Pteropus_vampyrus
ENSKMAG00000013113	-	70	32.398	ENSRNOG00000018830	Aff3	51	53.968	Rattus_norvegicus
ENSKMAG00000013113	-	53	53.968	ENSRBIG00000029993	AFF3	53	53.968	Rhinopithecus_bieti
ENSKMAG00000013113	-	53	54.688	ENSRROG00000033773	AFF3	53	53.968	Rhinopithecus_roxellana
ENSKMAG00000013113	-	53	54.688	ENSSBOG00000026667	AFF3	53	54.688	Saimiri_boliviensis_boliviensis
ENSKMAG00000013113	-	99	56.503	ENSSMAG00000007062	-	98	56.962	Scophthalmus_maximus
ENSKMAG00000013113	-	59	58.964	ENSSDUG00000023775	-	95	59.286	Seriola_dumerili
ENSKMAG00000013113	-	91	80.488	ENSSLDG00000006836	-	99	61.802	Seriola_lalandi_dorsalis
ENSKMAG00000013113	-	86	85.859	ENSSPAG00000003972	-	78	85.859	Stegastes_partitus
ENSKMAG00000013113	-	57	51.724	ENSSSCG00000023593	AFF1	56	51.880	Sus_scrofa
ENSKMAG00000013113	-	99	49.958	ENSTRUG00000014005	-	99	50.465	Takifugu_rubripes
ENSKMAG00000013113	-	54	38.760	ENSTBEG00000007536	AFF1	70	35.731	Tupaia_belangeri
ENSKMAG00000013113	-	53	53.125	ENSTTRG00000014061	AFF3	53	53.125	Tursiops_truncatus
ENSKMAG00000013113	-	69	31.838	ENSUMAG00000025433	AFF1	78	33.113	Ursus_maritimus
ENSKMAG00000013113	-	53	33.577	ENSVVUG00000009263	AFF1	69	34.606	Vulpes_vulpes
ENSKMAG00000013113	-	53	53.968	ENSVVUG00000028696	AFF3	53	53.968	Vulpes_vulpes
ENSKMAG00000013113	-	100	55.451	ENSXMAG00000004657	-	100	55.279	Xiphophorus_maculatus