EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013178 (Gene tree)
Gene ID: 108229103
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4522 bases
Position: chrLWHD01001910.1:6992-11513
Accession: 108229103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017693	RtcB	PF01139.17	4e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000017939	-	1839	XM_017404762	ENSKMAP00000017693	505 (aa)	XP_017260251	UPI0007F8FCAB

Gene Model

Click here to download ENSKMAG00000013178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013178	rtcb	100	94.455	ENSG00000100220	RTCB	100	94.455	Homo_sapiens
ENSKMAG00000013178	rtcb	100	97.228	ENSAPOG00000006040	rtcb	100	97.228	Acanthochromis_polyacanthus
ENSKMAG00000013178	rtcb	100	94.455	ENSAMEG00000016152	RTCB	100	94.455	Ailuropoda_melanoleuca
ENSKMAG00000013178	rtcb	100	92.277	ENSACIG00000009083	rtcb	100	92.277	Amphilophus_citrinellus
ENSKMAG00000013178	rtcb	100	97.624	ENSAOCG00000005662	rtcb	100	99.130	Amphiprion_ocellaris
ENSKMAG00000013178	rtcb	96	93.224	ENSAPEG00000024653	rtcb	100	93.224	Amphiprion_percula
ENSKMAG00000013178	rtcb	100	97.624	ENSAPEG00000024701	rtcb	100	97.624	Amphiprion_percula
ENSKMAG00000013178	rtcb	100	97.426	ENSATEG00000000618	rtcb	100	97.426	Anabas_testudineus
ENSKMAG00000013178	rtcb	100	91.329	ENSACAG00000014817	RTCB	100	91.329	Anolis_carolinensis
ENSKMAG00000013178	rtcb	100	79.406	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSKMAG00000013178	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSKMAG00000013178	rtcb	100	94.851	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSKMAG00000013178	rtcb	100	95.248	ENSAMXG00000042320	rtcb	100	95.248	Astyanax_mexicanus
ENSKMAG00000013178	rtcb	100	94.455	ENSBTAG00000011070	RTCB	100	94.455	Bos_taurus
ENSKMAG00000013178	rtcb	100	74.455	WBGene00008877	rtcb-1	100	74.455	Caenorhabditis_elegans
ENSKMAG00000013178	rtcb	100	94.257	ENSCJAG00000006128	RTCB	100	94.257	Callithrix_jacchus
ENSKMAG00000013178	rtcb	100	90.297	ENSCAFG00000010789	-	100	90.297	Canis_familiaris
ENSKMAG00000013178	rtcb	100	94.455	ENSCAFG00000001785	RTCB	100	94.455	Canis_familiaris
ENSKMAG00000013178	rtcb	100	94.455	ENSCAFG00020004890	-	100	94.455	Canis_lupus_dingo
ENSKMAG00000013178	rtcb	87	90.227	ENSCAFG00020018953	-	99	90.227	Canis_lupus_dingo
ENSKMAG00000013178	rtcb	100	94.653	ENSCHIG00000027009	-	100	94.653	Capra_hircus
ENSKMAG00000013178	rtcb	100	94.059	ENSTSYG00000012320	RTCB	100	94.059	Carlito_syrichta
ENSKMAG00000013178	rtcb	94	94.549	ENSCAPG00000011647	RTCB	96	94.549	Cavia_aperea
ENSKMAG00000013178	rtcb	100	94.257	ENSCCAG00000000618	RTCB	100	94.257	Cebus_capucinus
ENSKMAG00000013178	rtcb	100	94.059	ENSCATG00000033424	RTCB	100	94.059	Cercocebus_atys
ENSKMAG00000013178	rtcb	100	94.455	ENSCLAG00000007997	RTCB	100	94.455	Chinchilla_lanigera
ENSKMAG00000013178	rtcb	100	93.861	ENSCSAG00000008351	RTCB	100	93.861	Chlorocebus_sabaeus
ENSKMAG00000013178	rtcb	100	80.594	ENSCHOG00000009123	RTCB	100	80.594	Choloepus_hoffmanni
ENSKMAG00000013178	rtcb	100	93.465	ENSCPBG00000023184	RTCB	100	93.465	Chrysemys_picta_bellii
ENSKMAG00000013178	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSKMAG00000013178	rtcb	100	82.970	ENSCSAVG00000008124	-	100	82.232	Ciona_savignyi
ENSKMAG00000013178	rtcb	100	90.297	ENSCANG00000001891	RTCB	100	90.297	Colobus_angolensis_palliatus
ENSKMAG00000013178	rtcb	100	94.059	ENSCGRG00001011173	Rtcb	100	94.059	Cricetulus_griseus_chok1gshd
ENSKMAG00000013178	rtcb	93	95.329	ENSCGRG00000009587	-	96	95.329	Cricetulus_griseus_crigri
ENSKMAG00000013178	rtcb	100	96.436	ENSCSEG00000003986	rtcb	100	96.436	Cynoglossus_semilaevis
ENSKMAG00000013178	rtcb	82	96.875	ENSCVAG00000000569	rtcb	95	96.875	Cyprinodon_variegatus
ENSKMAG00000013178	rtcb	100	96.238	ENSDARG00000101047	rtcb	100	96.238	Danio_rerio
ENSKMAG00000013178	rtcb	80	90.172	ENSDNOG00000012425	RTCB	99	90.172	Dasypus_novemcinctus
ENSKMAG00000013178	rtcb	100	93.663	ENSDORG00000010855	Rtcb	100	93.663	Dipodomys_ordii
ENSKMAG00000013178	rtcb	99	85.885	FBgn0032781	RtcB	99	85.885	Drosophila_melanogaster
ENSKMAG00000013178	rtcb	100	88.317	ENSETEG00000001988	RTCB	100	88.317	Echinops_telfairi
ENSKMAG00000013178	rtcb	100	86.139	ENSEBUG00000014235	rtcb	100	86.139	Eptatretus_burgeri
ENSKMAG00000013178	rtcb	100	94.257	ENSEASG00005019059	RTCB	100	94.257	Equus_asinus_asinus
ENSKMAG00000013178	rtcb	100	94.257	ENSECAG00000023998	RTCB	100	94.257	Equus_caballus
ENSKMAG00000013178	rtcb	89	85.906	ENSEEUG00000006251	RTCB	100	85.906	Erinaceus_europaeus
ENSKMAG00000013178	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSKMAG00000013178	rtcb	100	94.455	ENSFCAG00000026480	RTCB	100	94.455	Felis_catus
ENSKMAG00000013178	rtcb	100	94.257	ENSFALG00000013334	RTCB	100	94.257	Ficedula_albicollis
ENSKMAG00000013178	rtcb	100	94.257	ENSFDAG00000018150	RTCB	100	94.257	Fukomys_damarensis
ENSKMAG00000013178	rtcb	100	97.426	ENSFHEG00000009595	rtcb	100	97.426	Fundulus_heteroclitus
ENSKMAG00000013178	rtcb	100	93.267	ENSGMOG00000018882	rtcb	100	93.267	Gadus_morhua
ENSKMAG00000013178	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSKMAG00000013178	rtcb	100	97.228	ENSGAFG00000004198	rtcb	100	97.228	Gambusia_affinis
ENSKMAG00000013178	rtcb	100	95.446	ENSGACG00000000586	rtcb	100	95.446	Gasterosteus_aculeatus
ENSKMAG00000013178	rtcb	93	92.766	ENSGAGG00000019133	RTCB	98	92.766	Gopherus_agassizii
ENSKMAG00000013178	rtcb	100	94.455	ENSGGOG00000011402	RTCB	100	94.455	Gorilla_gorilla
ENSKMAG00000013178	rtcb	100	94.851	ENSHBUG00000020571	rtcb	100	94.851	Haplochromis_burtoni
ENSKMAG00000013178	rtcb	93	68.230	ENSHGLG00000001066	-	99	68.230	Heterocephalus_glaber_female
ENSKMAG00000013178	rtcb	100	94.257	ENSHGLG00000004492	RTCB	100	94.257	Heterocephalus_glaber_female
ENSKMAG00000013178	rtcb	100	94.257	ENSHGLG00100008965	RTCB	100	94.257	Heterocephalus_glaber_male
ENSKMAG00000013178	rtcb	100	94.872	ENSHCOG00000006450	rtcb	100	94.872	Hippocampus_comes
ENSKMAG00000013178	rtcb	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
ENSKMAG00000013178	rtcb	100	94.257	ENSSTOG00000003878	RTCB	100	94.257	Ictidomys_tridecemlineatus
ENSKMAG00000013178	rtcb	100	93.861	ENSJJAG00000010667	Rtcb	100	93.861	Jaculus_jaculus
ENSKMAG00000013178	rtcb	100	97.030	ENSLBEG00000010566	RTCB	100	97.030	Labrus_bergylta
ENSKMAG00000013178	rtcb	100	95.842	ENSLBEG00000000214	rtcb	100	95.842	Labrus_bergylta
ENSKMAG00000013178	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSKMAG00000013178	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSKMAG00000013178	rtcb	100	93.861	ENSLAFG00000002082	RTCB	100	93.861	Loxodonta_africana
ENSKMAG00000013178	rtcb	100	93.861	ENSMFAG00000034419	RTCB	100	93.861	Macaca_fascicularis
ENSKMAG00000013178	rtcb	100	93.861	ENSMMUG00000006720	RTCB	100	93.861	Macaca_mulatta
ENSKMAG00000013178	rtcb	100	93.861	ENSMNEG00000040669	RTCB	100	93.861	Macaca_nemestrina
ENSKMAG00000013178	rtcb	100	94.059	ENSMLEG00000040505	RTCB	100	94.059	Mandrillus_leucophaeus
ENSKMAG00000013178	rtcb	100	97.624	ENSMAMG00000020676	rtcb	100	97.624	Mastacembelus_armatus
ENSKMAG00000013178	rtcb	100	94.851	ENSMZEG00005018942	rtcb	100	94.851	Maylandia_zebra
ENSKMAG00000013178	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSKMAG00000013178	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSKMAG00000013178	rtcb	100	94.257	ENSMICG00000013303	-	100	94.257	Microcebus_murinus
ENSKMAG00000013178	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSKMAG00000013178	rtcb	100	94.455	ENSMOCG00000002440	Rtcb	100	94.455	Microtus_ochrogaster
ENSKMAG00000013178	rtcb	100	97.030	ENSMMOG00000005987	rtcb	100	97.030	Mola_mola
ENSKMAG00000013178	rtcb	100	94.059	ENSMODG00000001414	RTCB	100	94.059	Monodelphis_domestica
ENSKMAG00000013178	rtcb	100	98.020	ENSMALG00000007603	rtcb	100	98.020	Monopterus_albus
ENSKMAG00000013178	rtcb	100	94.059	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.059	Mus_caroli
ENSKMAG00000013178	rtcb	100	94.059	ENSMUSG00000001783	Rtcb	100	94.059	Mus_musculus
ENSKMAG00000013178	rtcb	100	94.059	MGP_PahariEiJ_G0031396	Rtcb	100	94.059	Mus_pahari
ENSKMAG00000013178	rtcb	100	94.059	MGP_SPRETEiJ_G0016507	Rtcb	100	94.059	Mus_spretus
ENSKMAG00000013178	rtcb	100	94.455	ENSMPUG00000012285	RTCB	100	94.455	Mustela_putorius_furo
ENSKMAG00000013178	rtcb	100	91.913	ENSMLUG00000007803	RTCB	100	91.913	Myotis_lucifugus
ENSKMAG00000013178	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSKMAG00000013178	rtcb	100	95.050	ENSNBRG00000017202	rtcb	100	95.050	Neolamprologus_brichardi
ENSKMAG00000013178	rtcb	100	94.455	ENSNLEG00000004960	RTCB	100	94.455	Nomascus_leucogenys
ENSKMAG00000013178	rtcb	100	70.099	ENSMEUG00000007809	-	100	70.099	Notamacropus_eugenii
ENSKMAG00000013178	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSKMAG00000013178	rtcb	100	63.366	ENSODEG00000005042	-	100	63.366	Octodon_degus
ENSKMAG00000013178	rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSKMAG00000013178	rtcb	100	95.842	ENSONIG00000007474	rtcb	100	95.842	Oreochromis_niloticus
ENSKMAG00000013178	rtcb	100	93.861	ENSOANG00000005524	RTCB	100	93.861	Ornithorhynchus_anatinus
ENSKMAG00000013178	rtcb	93	94.043	ENSOCUG00000008270	RTCB	96	94.043	Oryctolagus_cuniculus
ENSKMAG00000013178	rtcb	100	97.030	ENSORLG00000020093	rtcb	100	97.030	Oryzias_latipes
ENSKMAG00000013178	rtcb	100	97.030	ENSORLG00020003706	rtcb	99	98.105	Oryzias_latipes_hni
ENSKMAG00000013178	rtcb	100	97.228	ENSORLG00015002968	rtcb	100	97.228	Oryzias_latipes_hsok
ENSKMAG00000013178	rtcb	100	96.832	ENSOMEG00000021278	rtcb	100	96.832	Oryzias_melastigma
ENSKMAG00000013178	rtcb	100	93.663	ENSOGAG00000001425	RTCB	100	93.663	Otolemur_garnettii
ENSKMAG00000013178	rtcb	100	94.653	ENSOARG00000018008	RTCB	100	94.653	Ovis_aries
ENSKMAG00000013178	rtcb	100	94.455	ENSPPAG00000028667	RTCB	100	94.455	Pan_paniscus
ENSKMAG00000013178	rtcb	100	94.455	ENSPPRG00000004038	RTCB	100	94.455	Panthera_pardus
ENSKMAG00000013178	rtcb	94	90.526	ENSPTIG00000020499	RTCB	97	91.579	Panthera_tigris_altaica
ENSKMAG00000013178	rtcb	100	94.455	ENSPTRG00000014287	RTCB	100	94.455	Pan_troglodytes
ENSKMAG00000013178	rtcb	100	93.861	ENSPANG00000016035	RTCB	100	93.861	Papio_anubis
ENSKMAG00000013178	rtcb	100	94.851	ENSPKIG00000001881	rtcb	100	94.851	Paramormyrops_kingsleyae
ENSKMAG00000013178	rtcb	91	94.565	ENSPSIG00000011690	RTCB	100	94.565	Pelodiscus_sinensis
ENSKMAG00000013178	rtcb	100	96.634	ENSPMGG00000016672	rtcb	100	96.634	Periophthalmus_magnuspinnatus
ENSKMAG00000013178	rtcb	100	94.059	ENSPEMG00000019548	Rtcb	100	94.059	Peromyscus_maniculatus_bairdii
ENSKMAG00000013178	rtcb	100	91.287	ENSPMAG00000005657	rtcb	100	91.287	Petromyzon_marinus
ENSKMAG00000013178	rtcb	100	94.059	ENSPCIG00000009467	RTCB	100	94.059	Phascolarctos_cinereus
ENSKMAG00000013178	rtcb	100	97.624	ENSPFOG00000003058	rtcb	100	97.624	Poecilia_formosa
ENSKMAG00000013178	rtcb	100	97.426	ENSPLAG00000017663	rtcb	100	97.426	Poecilia_latipinna
ENSKMAG00000013178	rtcb	100	97.624	ENSPMEG00000006227	rtcb	100	97.624	Poecilia_mexicana
ENSKMAG00000013178	rtcb	100	97.030	ENSPREG00000018467	rtcb	100	97.030	Poecilia_reticulata
ENSKMAG00000013178	rtcb	100	94.455	ENSPPYG00000011752	RTCB	100	94.455	Pongo_abelii
ENSKMAG00000013178	rtcb	93	77.542	ENSPCAG00000013641	RTCB	100	77.542	Procavia_capensis
ENSKMAG00000013178	rtcb	100	94.059	ENSPCOG00000017243	RTCB	100	94.059	Propithecus_coquereli
ENSKMAG00000013178	rtcb	93	93.191	ENSPVAG00000002380	RTCB	100	93.191	Pteropus_vampyrus
ENSKMAG00000013178	rtcb	100	94.851	ENSPNYG00000022760	rtcb	100	94.851	Pundamilia_nyererei
ENSKMAG00000013178	rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSKMAG00000013178	rtcb	100	94.059	ENSRNOG00000004813	Rtcb	100	94.059	Rattus_norvegicus
ENSKMAG00000013178	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSKMAG00000013178	rtcb	100	89.505	ENSSBOG00000020085	-	100	89.505	Saimiri_boliviensis_boliviensis
ENSKMAG00000013178	rtcb	94	95.359	ENSSHAG00000016277	RTCB	100	95.359	Sarcophilus_harrisii
ENSKMAG00000013178	rtcb	100	95.446	ENSSFOG00015000763	rtcb	100	95.446	Scleropages_formosus
ENSKMAG00000013178	rtcb	100	93.069	ENSSFOG00015011572	RTCB	100	93.069	Scleropages_formosus
ENSKMAG00000013178	rtcb	100	94.455	ENSSMAG00000005096	rtcb	100	94.455	Scophthalmus_maximus
ENSKMAG00000013178	rtcb	100	96.436	ENSSDUG00000012605	rtcb	100	96.436	Seriola_dumerili
ENSKMAG00000013178	rtcb	100	96.436	ENSSLDG00000019458	rtcb	100	96.436	Seriola_lalandi_dorsalis
ENSKMAG00000013178	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSKMAG00000013178	rtcb	100	93.267	ENSSPUG00000012814	RTCB	100	93.267	Sphenodon_punctatus
ENSKMAG00000013178	rtcb	100	97.624	ENSSPAG00000004623	rtcb	100	97.624	Stegastes_partitus
ENSKMAG00000013178	rtcb	100	94.455	ENSSSCG00000000158	RTCB	100	94.455	Sus_scrofa
ENSKMAG00000013178	rtcb	100	94.257	ENSTGUG00000010947	RTCB	99	94.257	Taeniopygia_guttata
ENSKMAG00000013178	rtcb	91	97.609	ENSTRUG00000009880	rtcb	100	97.609	Takifugu_rubripes
ENSKMAG00000013178	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSKMAG00000013178	rtcb	100	81.188	ENSTBEG00000004418	RTCB	100	81.188	Tupaia_belangeri
ENSKMAG00000013178	rtcb	93	93.404	ENSTTRG00000006417	RTCB	100	93.404	Tursiops_truncatus
ENSKMAG00000013178	rtcb	100	94.455	ENSUAMG00000022792	RTCB	100	94.455	Ursus_americanus
ENSKMAG00000013178	rtcb	100	94.455	ENSUMAG00000017225	RTCB	100	94.455	Ursus_maritimus
ENSKMAG00000013178	rtcb	100	94.257	ENSVPAG00000005375	RTCB	100	94.257	Vicugna_pacos
ENSKMAG00000013178	rtcb	100	94.455	ENSVVUG00000023408	RTCB	100	95.086	Vulpes_vulpes
ENSKMAG00000013178	rtcb	100	93.267	ENSXETG00000011523	rtcb	100	93.267	Xenopus_tropicalis
ENSKMAG00000013178	rtcb	100	97.228	ENSXMAG00000002855	rtcb	100	97.228	Xiphophorus_maculatus