EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000013236 (Gene tree)
Gene ID: 108228297
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 9565 bases
Position: chrLWHD01001101.1:5345-14909
Accession: 108228297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017800	PRP4	PF08799.11	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018048	-	1656	XM_017403840	ENSKMAP00000017800	510 (aa)	XP_017259329	UPI0007F892FE

Gene Model

Click here to download ENSKMAG00000013236's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000013236	prpf4	58	31.159	ENSKMAG00000020117	tbl3	79	31.373
ENSKMAG00000013236	prpf4	54	33.333	ENSKMAG00000008299	pex7	73	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013236	prpf4	99	76.190	ENSG00000136875	PRPF4	96	76.190	Homo_sapiens
ENSKMAG00000013236	prpf4	99	90.890	ENSAPOG00000014132	prpf4	99	90.890	Acanthochromis_polyacanthus
ENSKMAG00000013236	prpf4	99	76.190	ENSAMEG00000013048	PRPF4	94	76.190	Ailuropoda_melanoleuca
ENSKMAG00000013236	prpf4	100	92.353	ENSACIG00000005579	prpf4	100	92.353	Amphilophus_citrinellus
ENSKMAG00000013236	prpf4	100	91.373	ENSAOCG00000005457	prpf4	100	91.373	Amphiprion_ocellaris
ENSKMAG00000013236	prpf4	100	91.176	ENSAPEG00000000776	prpf4	100	91.176	Amphiprion_percula
ENSKMAG00000013236	prpf4	100	91.765	ENSATEG00000023013	prpf4	100	91.765	Anabas_testudineus
ENSKMAG00000013236	prpf4	99	76.726	ENSAPLG00000006534	PRPF4	94	76.726	Anas_platyrhynchos
ENSKMAG00000013236	prpf4	99	76.125	ENSACAG00000015110	PRPF4	97	76.125	Anolis_carolinensis
ENSKMAG00000013236	prpf4	99	76.190	ENSANAG00000022464	PRPF4	93	76.190	Aotus_nancymaae
ENSKMAG00000013236	prpf4	100	91.961	ENSACLG00000019031	prpf4	100	91.961	Astatotilapia_calliptera
ENSKMAG00000013236	prpf4	100	61.787	ENSAMXG00000006756	prpf4	100	73.922	Astyanax_mexicanus
ENSKMAG00000013236	prpf4	99	76.190	ENSBTAG00000004571	PRPF4	96	76.190	Bos_taurus
ENSKMAG00000013236	prpf4	92	44.915	WBGene00007972	prp-4	95	44.915	Caenorhabditis_elegans
ENSKMAG00000013236	prpf4	99	76.190	ENSCJAG00000017856	PRPF4	96	76.190	Callithrix_jacchus
ENSKMAG00000013236	prpf4	99	76.190	ENSCAFG00000003224	PRPF4	93	76.190	Canis_familiaris
ENSKMAG00000013236	prpf4	99	76.190	ENSCAFG00020022637	PRPF4	97	76.190	Canis_lupus_dingo
ENSKMAG00000013236	prpf4	99	76.190	ENSCHIG00000024648	-	96	76.190	Capra_hircus
ENSKMAG00000013236	prpf4	99	76.389	ENSTSYG00000010366	PRPF4	96	76.389	Carlito_syrichta
ENSKMAG00000013236	prpf4	90	68.974	ENSCAPG00000008935	PRPF4	97	68.974	Cavia_aperea
ENSKMAG00000013236	prpf4	99	71.032	ENSCPOG00000014729	-	96	71.032	Cavia_porcellus
ENSKMAG00000013236	prpf4	99	75.794	ENSCPOG00000010747	-	96	75.794	Cavia_porcellus
ENSKMAG00000013236	prpf4	99	75.992	ENSCCAG00000028990	PRPF4	96	75.992	Cebus_capucinus
ENSKMAG00000013236	prpf4	99	76.190	ENSCATG00000021552	PRPF4	96	76.190	Cercocebus_atys
ENSKMAG00000013236	prpf4	99	76.389	ENSCLAG00000013448	PRPF4	96	76.389	Chinchilla_lanigera
ENSKMAG00000013236	prpf4	89	76.106	ENSCHOG00000007233	PRPF4	100	76.106	Choloepus_hoffmanni
ENSKMAG00000013236	prpf4	99	75.937	ENSCPBG00000019136	PRPF4	73	75.937	Chrysemys_picta_bellii
ENSKMAG00000013236	prpf4	100	58.700	ENSCING00000001299	-	100	58.700	Ciona_intestinalis
ENSKMAG00000013236	prpf4	99	58.743	ENSCSAVG00000009178	-	99	60.606	Ciona_savignyi
ENSKMAG00000013236	prpf4	99	76.190	ENSCANG00000003246	PRPF4	96	76.190	Colobus_angolensis_palliatus
ENSKMAG00000013236	prpf4	99	76.389	ENSCGRG00001016992	Prpf4	96	76.389	Cricetulus_griseus_chok1gshd
ENSKMAG00000013236	prpf4	99	76.389	ENSCGRG00000017560	Prpf4	96	76.389	Cricetulus_griseus_crigri
ENSKMAG00000013236	prpf4	100	85.882	ENSCSEG00000020451	prpf4	100	85.882	Cynoglossus_semilaevis
ENSKMAG00000013236	prpf4	100	79.608	ENSDARG00000067639	prpf4	100	79.608	Danio_rerio
ENSKMAG00000013236	prpf4	99	75.992	ENSDNOG00000013203	PRPF4	96	75.992	Dasypus_novemcinctus
ENSKMAG00000013236	prpf4	99	76.587	ENSDORG00000026275	Prpf4	96	76.587	Dipodomys_ordii
ENSKMAG00000013236	prpf4	99	49.728	FBgn0036733	U4-U6-60K	99	49.909	Drosophila_melanogaster
ENSKMAG00000013236	prpf4	99	76.786	ENSETEG00000020389	PRPF4	96	76.786	Echinops_telfairi
ENSKMAG00000013236	prpf4	99	68.834	ENSEBUG00000015229	prpf4	88	69.283	Eptatretus_burgeri
ENSKMAG00000013236	prpf4	99	76.190	ENSEASG00005022678	PRPF4	96	76.190	Equus_asinus_asinus
ENSKMAG00000013236	prpf4	99	76.190	ENSECAG00000007072	PRPF4	96	76.190	Equus_caballus
ENSKMAG00000013236	prpf4	84	80.335	ENSEEUG00000007480	PRPF4	96	59.819	Erinaceus_europaeus
ENSKMAG00000013236	prpf4	100	80.980	ENSELUG00000007510	prpf4	100	80.980	Esox_lucius
ENSKMAG00000013236	prpf4	99	76.190	ENSFCAG00000005514	PRPF4	96	76.190	Felis_catus
ENSKMAG00000013236	prpf4	99	75.395	ENSFALG00000005423	PRPF4	85	75.395	Ficedula_albicollis
ENSKMAG00000013236	prpf4	99	76.190	ENSFDAG00000005839	PRPF4	96	76.190	Fukomys_damarensis
ENSKMAG00000013236	prpf4	100	92.549	ENSFHEG00000001300	prpf4	100	92.549	Fundulus_heteroclitus
ENSKMAG00000013236	prpf4	99	76.529	ENSGALG00000008857	PRPF4	94	76.529	Gallus_gallus
ENSKMAG00000013236	prpf4	85	87.842	ENSGAFG00000012164	prpf4	68	87.842	Gambusia_affinis
ENSKMAG00000013236	prpf4	100	80.469	ENSGACG00000015476	prpf4	100	80.078	Gasterosteus_aculeatus
ENSKMAG00000013236	prpf4	99	75.937	ENSGAGG00000025029	PRPF4	94	75.937	Gopherus_agassizii
ENSKMAG00000013236	prpf4	99	76.190	ENSGGOG00000006943	PRPF4	96	76.190	Gorilla_gorilla
ENSKMAG00000013236	prpf4	100	91.765	ENSHBUG00000000562	prpf4	100	91.765	Haplochromis_burtoni
ENSKMAG00000013236	prpf4	99	75.992	ENSHGLG00000015191	PRPF4	96	75.992	Heterocephalus_glaber_female
ENSKMAG00000013236	prpf4	99	61.310	ENSHGLG00000003838	-	96	61.310	Heterocephalus_glaber_female
ENSKMAG00000013236	prpf4	95	65.849	ENSHGLG00000016628	-	95	66.258	Heterocephalus_glaber_female
ENSKMAG00000013236	prpf4	99	61.310	ENSHGLG00100005571	-	96	61.310	Heterocephalus_glaber_male
ENSKMAG00000013236	prpf4	100	78.235	ENSIPUG00000017956	PRPF4	100	78.235	Ictalurus_punctatus
ENSKMAG00000013236	prpf4	99	76.587	ENSSTOG00000027833	PRPF4	96	76.587	Ictidomys_tridecemlineatus
ENSKMAG00000013236	prpf4	99	76.190	ENSJJAG00000008838	Prpf4	96	76.190	Jaculus_jaculus
ENSKMAG00000013236	prpf4	100	91.569	ENSLBEG00000020611	prpf4	100	91.569	Labrus_bergylta
ENSKMAG00000013236	prpf4	100	71.875	ENSLACG00000016317	PRPF4	97	71.875	Latimeria_chalumnae
ENSKMAG00000013236	prpf4	100	80.980	ENSLOCG00000000581	prpf4	100	81.176	Lepisosteus_oculatus
ENSKMAG00000013236	prpf4	99	76.190	ENSLAFG00000018225	PRPF4	96	76.190	Loxodonta_africana
ENSKMAG00000013236	prpf4	99	75.992	ENSMFAG00000039397	PRPF4	96	75.992	Macaca_fascicularis
ENSKMAG00000013236	prpf4	99	76.190	ENSMMUG00000005844	PRPF4	96	76.190	Macaca_mulatta
ENSKMAG00000013236	prpf4	99	67.460	ENSMNEG00000033737	PRPF4	96	67.460	Macaca_nemestrina
ENSKMAG00000013236	prpf4	99	76.190	ENSMLEG00000040284	PRPF4	96	76.190	Mandrillus_leucophaeus
ENSKMAG00000013236	prpf4	100	90.784	ENSMAMG00000020141	prpf4	100	90.784	Mastacembelus_armatus
ENSKMAG00000013236	prpf4	100	91.961	ENSMZEG00005023205	prpf4	100	91.961	Maylandia_zebra
ENSKMAG00000013236	prpf4	99	75.937	ENSMGAG00000001796	PRPF4	94	75.937	Meleagris_gallopavo
ENSKMAG00000013236	prpf4	99	76.389	ENSMAUG00000018022	Prpf4	96	76.389	Mesocricetus_auratus
ENSKMAG00000013236	prpf4	99	75.639	ENSMICG00000015022	PRPF4	97	75.639	Microcebus_murinus
ENSKMAG00000013236	prpf4	99	76.587	ENSMOCG00000018273	Prpf4	96	76.587	Microtus_ochrogaster
ENSKMAG00000013236	prpf4	100	88.824	ENSMMOG00000021177	prpf4	100	88.824	Mola_mola
ENSKMAG00000013236	prpf4	99	75.542	ENSMODG00000004444	-	97	75.542	Monodelphis_domestica
ENSKMAG00000013236	prpf4	99	74.951	ENSMODG00000025096	-	94	74.951	Monodelphis_domestica
ENSKMAG00000013236	prpf4	100	91.765	ENSMALG00000013624	prpf4	100	91.765	Monopterus_albus
ENSKMAG00000013236	prpf4	99	76.389	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.389	Mus_caroli
ENSKMAG00000013236	prpf4	99	76.389	ENSMUSG00000066148	Prpf4	96	76.389	Mus_musculus
ENSKMAG00000013236	prpf4	99	76.587	MGP_PahariEiJ_G0028413	Prpf4	96	76.587	Mus_pahari
ENSKMAG00000013236	prpf4	99	76.389	MGP_SPRETEiJ_G0027042	Prpf4	96	76.389	Mus_spretus
ENSKMAG00000013236	prpf4	99	76.190	ENSMPUG00000007883	PRPF4	96	76.190	Mustela_putorius_furo
ENSKMAG00000013236	prpf4	99	74.802	ENSMLUG00000008626	-	94	74.802	Myotis_lucifugus
ENSKMAG00000013236	prpf4	99	75.992	ENSMLUG00000015309	-	93	75.992	Myotis_lucifugus
ENSKMAG00000013236	prpf4	99	71.032	ENSNGAG00000000468	Prpf4	96	71.032	Nannospalax_galili
ENSKMAG00000013236	prpf4	100	92.157	ENSNBRG00000007972	prpf4	100	92.157	Neolamprologus_brichardi
ENSKMAG00000013236	prpf4	99	76.190	ENSNLEG00000016647	PRPF4	96	76.190	Nomascus_leucogenys
ENSKMAG00000013236	prpf4	99	75.148	ENSMEUG00000013256	PRPF4	98	75.148	Notamacropus_eugenii
ENSKMAG00000013236	prpf4	99	76.190	ENSOPRG00000005302	PRPF4	96	76.190	Ochotona_princeps
ENSKMAG00000013236	prpf4	99	76.190	ENSODEG00000018147	PRPF4	96	76.190	Octodon_degus
ENSKMAG00000013236	prpf4	100	91.961	ENSONIG00000012671	prpf4	100	91.961	Oreochromis_niloticus
ENSKMAG00000013236	prpf4	99	76.389	ENSOCUG00000005046	PRPF4	96	76.389	Oryctolagus_cuniculus
ENSKMAG00000013236	prpf4	100	89.412	ENSORLG00000019641	prpf4	100	89.412	Oryzias_latipes
ENSKMAG00000013236	prpf4	100	89.412	ENSORLG00020019438	prpf4	100	89.412	Oryzias_latipes_hni
ENSKMAG00000013236	prpf4	100	89.020	ENSOMEG00000020941	prpf4	100	89.441	Oryzias_melastigma
ENSKMAG00000013236	prpf4	99	72.421	ENSOGAG00000007802	PRPF4	94	72.421	Otolemur_garnettii
ENSKMAG00000013236	prpf4	99	76.190	ENSOARG00000006319	PRPF4	93	76.190	Ovis_aries
ENSKMAG00000013236	prpf4	99	76.190	ENSPPAG00000041797	PRPF4	96	76.190	Pan_paniscus
ENSKMAG00000013236	prpf4	99	76.190	ENSPPRG00000014360	PRPF4	96	76.190	Panthera_pardus
ENSKMAG00000013236	prpf4	99	76.190	ENSPTIG00000009574	PRPF4	96	76.190	Panthera_tigris_altaica
ENSKMAG00000013236	prpf4	99	76.190	ENSPTRG00000021274	PRPF4	96	76.190	Pan_troglodytes
ENSKMAG00000013236	prpf4	99	76.389	ENSPANG00000025776	PRPF4	92	76.389	Papio_anubis
ENSKMAG00000013236	prpf4	100	82.157	ENSPKIG00000017259	prpf4	100	82.157	Paramormyrops_kingsleyae
ENSKMAG00000013236	prpf4	99	76.134	ENSPSIG00000010713	PRPF4	89	76.134	Pelodiscus_sinensis
ENSKMAG00000013236	prpf4	100	65.056	ENSPMGG00000000997	prpf4	98	66.357	Periophthalmus_magnuspinnatus
ENSKMAG00000013236	prpf4	99	76.389	ENSPEMG00000024115	Prpf4	96	76.389	Peromyscus_maniculatus_bairdii
ENSKMAG00000013236	prpf4	99	75.345	ENSPCIG00000003821	PRPF4	98	75.345	Phascolarctos_cinereus
ENSKMAG00000013236	prpf4	100	84.630	ENSPFOG00000013524	prpf4	99	88.146	Poecilia_formosa
ENSKMAG00000013236	prpf4	84	86.378	ENSPLAG00000011620	prpf4	97	86.378	Poecilia_latipinna
ENSKMAG00000013236	prpf4	98	88.496	ENSPMEG00000006813	prpf4	100	88.496	Poecilia_mexicana
ENSKMAG00000013236	prpf4	99	76.190	ENSPCAG00000002561	PRPF4	98	76.190	Procavia_capensis
ENSKMAG00000013236	prpf4	99	76.389	ENSPCOG00000011975	PRPF4	96	76.389	Propithecus_coquereli
ENSKMAG00000013236	prpf4	99	73.214	ENSPVAG00000004708	PRPF4	96	73.214	Pteropus_vampyrus
ENSKMAG00000013236	prpf4	100	91.961	ENSPNYG00000008013	prpf4	100	91.961	Pundamilia_nyererei
ENSKMAG00000013236	prpf4	100	79.804	ENSPNAG00000000697	prpf4	100	79.804	Pygocentrus_nattereri
ENSKMAG00000013236	prpf4	99	76.389	ENSRNOG00000014777	Prpf4	96	76.389	Rattus_norvegicus
ENSKMAG00000013236	prpf4	99	76.190	ENSRBIG00000040221	PRPF4	96	76.190	Rhinopithecus_bieti
ENSKMAG00000013236	prpf4	99	76.190	ENSRROG00000040240	PRPF4	96	76.190	Rhinopithecus_roxellana
ENSKMAG00000013236	prpf4	99	75.345	ENSSHAG00000017658	PRPF4	97	75.345	Sarcophilus_harrisii
ENSKMAG00000013236	prpf4	100	81.373	ENSSFOG00015008963	prpf4	100	81.373	Scleropages_formosus
ENSKMAG00000013236	prpf4	100	89.608	ENSSMAG00000008889	prpf4	100	89.608	Scophthalmus_maximus
ENSKMAG00000013236	prpf4	99	91.718	ENSSDUG00000022083	prpf4	94	91.718	Seriola_dumerili
ENSKMAG00000013236	prpf4	99	91.511	ENSSLDG00000008115	prpf4	94	91.511	Seriola_lalandi_dorsalis
ENSKMAG00000013236	prpf4	99	76.424	ENSSPUG00000015582	PRPF4	97	76.424	Sphenodon_punctatus
ENSKMAG00000013236	prpf4	100	84.795	ENSSPAG00000011286	prpf4	100	84.795	Stegastes_partitus
ENSKMAG00000013236	prpf4	99	76.190	ENSSSCG00000024648	PRPF4	96	76.190	Sus_scrofa
ENSKMAG00000013236	prpf4	97	77.374	ENSTGUG00000002623	PRPF4	100	77.597	Taeniopygia_guttata
ENSKMAG00000013236	prpf4	100	86.863	ENSTRUG00000008853	prpf4	100	86.863	Takifugu_rubripes
ENSKMAG00000013236	prpf4	100	86.275	ENSTNIG00000013250	prpf4	100	86.275	Tetraodon_nigroviridis
ENSKMAG00000013236	prpf4	99	69.444	ENSTBEG00000000821	PRPF4	96	69.444	Tupaia_belangeri
ENSKMAG00000013236	prpf4	89	78.188	ENSTTRG00000003246	PRPF4	85	78.188	Tursiops_truncatus
ENSKMAG00000013236	prpf4	69	66.761	ENSUAMG00000018288	PRPF4	88	72.816	Ursus_americanus
ENSKMAG00000013236	prpf4	99	75.595	ENSUMAG00000019375	PRPF4	96	75.595	Ursus_maritimus
ENSKMAG00000013236	prpf4	99	75.794	ENSVPAG00000005281	PRPF4	96	75.794	Vicugna_pacos
ENSKMAG00000013236	prpf4	99	75.542	ENSVVUG00000002476	PRPF4	99	75.542	Vulpes_vulpes
ENSKMAG00000013236	prpf4	70	65.385	ENSXCOG00000006101	prpf4	93	68.204	Xiphophorus_couchianus
ENSKMAG00000013236	prpf4	91	76.344	ENSXMAG00000002750	prpf4	100	77.583	Xiphophorus_maculatus