EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000013239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 5377 bases
Position: chrLWHD01000032.1:1144431-1149807
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	1	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	2	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	3	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	4	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	5	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	6	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	7	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	8	9
ENSKMAP00000017767	zf-C2H2	PF00096.26	1.3e-48	9	9
ENSKMAP00000017767	zf-met	PF12874.7	6e-15	1	3
ENSKMAP00000017767	zf-met	PF12874.7	6e-15	2	3
ENSKMAP00000017767	zf-met	PF12874.7	6e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018015	-	3247	-	ENSKMAP00000017767	769 (aa)	-	-

Gene Model

Click here to download ENSKMAG00000013239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000013239	-	71	34.528	ENSKMAG00000011850	-	82	34.528
ENSKMAG00000013239	-	59	33.721	ENSKMAG00000006450	-	98	33.721
ENSKMAG00000013239	-	55	36.029	ENSKMAG00000016588	-	79	36.029
ENSKMAG00000013239	-	60	37.500	ENSKMAG00000013863	-	86	37.500
ENSKMAG00000013239	-	50	39.931	ENSKMAG00000019130	-	82	39.931
ENSKMAG00000013239	-	50	35.581	ENSKMAG00000006392	-	62	35.714
ENSKMAG00000013239	-	52	36.111	ENSKMAG00000006327	si:ch211-216l23.1	81	36.111
ENSKMAG00000013239	-	60	35.455	ENSKMAG00000019912	-	82	35.455
ENSKMAG00000013239	-	54	38.798	ENSKMAG00000014002	si:ch211-79k12.2	82	34.483
ENSKMAG00000013239	-	50	36.364	ENSKMAG00000000795	-	99	36.364
ENSKMAG00000013239	-	60	42.623	ENSKMAG00000014939	-	78	42.623
ENSKMAG00000013239	-	70	39.815	ENSKMAG00000003402	-	59	40.000
ENSKMAG00000013239	-	63	33.333	ENSKMAG00000000073	-	93	35.625
ENSKMAG00000013239	-	50	41.748	ENSKMAG00000005375	-	78	41.748
ENSKMAG00000013239	-	63	33.670	ENSKMAG00000009979	-	80	34.653
ENSKMAG00000013239	-	57	38.788	ENSKMAG00000005747	-	91	38.788
ENSKMAG00000013239	-	74	36.923	ENSKMAG00000012909	-	89	39.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013239	-	96	73.181	ENSHCOG00000013972	-	100	72.908	Hippocampus_comes
ENSKMAG00000013239	-	56	44.089	ENSMAMG00000018114	-	93	40.175	Mastacembelus_armatus
ENSKMAG00000013239	-	53	40.351	ENSNBRG00000013501	-	83	40.351	Neolamprologus_brichardi
ENSKMAG00000013239	-	60	39.459	ENSTRUG00000022206	-	91	39.459	Takifugu_rubripes