EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013261 (Gene tree)
Gene ID: 108231949
Gene Symbol: -
Alias: -
Full Name: ataxin-1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 17495 bases
Position: chrLWHD01000014.1:3675800-3693294
Accession: 108231949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017788	AXH	PF08517.12	2.6e-35	1	1
ENSKMAP00000017795	AXH	PF08517.12	2.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018037	-	4165	XM_017409391	ENSKMAP00000017788	674 (aa)	XP_017264880	UPI0007F8B24D
ENSKMAT00000018043	-	3965	XM_017409392	ENSKMAP00000017795	674 (aa)	XP_017264881	UPI0007F8B24D

Gene Model

Click here to download ENSKMAG00000013261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013261's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013261	-	100	81.195	ENSAPOG00000010154	-	100	80.904	Acanthochromis_polyacanthus
ENSKMAG00000013261	-	100	81.168	ENSAOCG00000006788	-	100	80.730	Amphiprion_ocellaris
ENSKMAG00000013261	-	100	80.876	ENSAPEG00000013961	-	100	80.438	Amphiprion_percula
ENSKMAG00000013261	-	100	75.362	ENSATEG00000015767	-	100	75.072	Anabas_testudineus
ENSKMAG00000013261	-	100	43.804	ENSAMXG00000002724	-	100	43.867	Astyanax_mexicanus
ENSKMAG00000013261	-	100	67.006	ENSCSEG00000020655	-	100	66.715	Cynoglossus_semilaevis
ENSKMAG00000013261	-	100	74.633	ENSCVAG00000012483	-	100	74.446	Cyprinodon_variegatus
ENSKMAG00000013261	-	100	76.979	ENSFHEG00000003223	-	100	76.540	Fundulus_heteroclitus
ENSKMAG00000013261	-	100	77.566	ENSGAFG00000013774	-	100	77.126	Gambusia_affinis
ENSKMAG00000013261	-	100	75.656	ENSHBUG00000007567	-	100	76.017	Haplochromis_burtoni
ENSKMAG00000013261	-	100	61.267	ENSHCOG00000000585	-	100	62.115	Hippocampus_comes
ENSKMAG00000013261	-	100	38.043	ENSIPUG00000014628	-	100	38.950	Ictalurus_punctatus
ENSKMAG00000013261	-	77	76.245	ENSLBEG00000007715	-	100	75.385	Labrus_bergylta
ENSKMAG00000013261	-	86	47.679	ENSLOCG00000003546	-	94	48.485	Lepisosteus_oculatus
ENSKMAG00000013261	-	100	74.128	ENSMAMG00000024117	-	100	74.419	Mastacembelus_armatus
ENSKMAG00000013261	-	100	75.656	ENSMZEG00005025990	-	100	76.017	Maylandia_zebra
ENSKMAG00000013261	-	100	75.581	ENSMALG00000022211	-	100	75.436	Monopterus_albus
ENSKMAG00000013261	-	100	70.088	ENSORLG00000025783	-	100	69.355	Oryzias_latipes
ENSKMAG00000013261	-	100	70.235	ENSORLG00020018594	-	100	69.501	Oryzias_latipes_hni
ENSKMAG00000013261	-	100	69.750	ENSORLG00015013642	-	100	68.429	Oryzias_latipes_hsok
ENSKMAG00000013261	-	100	70.968	ENSOMEG00000007446	-	100	70.674	Oryzias_melastigma
ENSKMAG00000013261	-	84	37.767	ENSPKIG00000025441	-	97	36.430	Paramormyrops_kingsleyae
ENSKMAG00000013261	-	100	78.006	ENSPFOG00000009556	-	100	77.566	Poecilia_formosa
ENSKMAG00000013261	-	73	78.937	ENSPLAG00000020125	-	99	78.937	Poecilia_latipinna
ENSKMAG00000013261	-	100	77.859	ENSPMEG00000023122	-	100	77.419	Poecilia_mexicana
ENSKMAG00000013261	-	100	78.152	ENSPREG00000007919	-	100	77.713	Poecilia_reticulata
ENSKMAG00000013261	-	100	43.146	ENSPNAG00000001615	-	100	43.605	Pygocentrus_nattereri
ENSKMAG00000013261	-	84	38.655	ENSSFOG00015020613	-	98	36.765	Scleropages_formosus
ENSKMAG00000013261	-	89	76.268	ENSSDUG00000022785	-	99	75.777	Seriola_dumerili
ENSKMAG00000013261	-	100	76.093	ENSSLDG00000012498	-	100	75.656	Seriola_lalandi_dorsalis
ENSKMAG00000013261	-	100	80.725	ENSSPAG00000018983	-	100	80.435	Stegastes_partitus
ENSKMAG00000013261	-	100	79.087	ENSXMAG00000028965	-	100	79.381	Xiphophorus_maculatus