EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013348 (Gene tree)
Gene ID: 108229828
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7839 bases
Position: chrLWHD01000007.1:863938-871776
Accession: 108229828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017918	RRM_1	PF00076.22	4e-58	1	3
ENSKMAP00000017918	RRM_1	PF00076.22	4e-58	2	3
ENSKMAP00000017918	RRM_1	PF00076.22	4e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018166	-	4771	XM_017405506	ENSKMAP00000017918	752 (aa)	XP_017260995	UPI0007F89A68

Gene Model

Click here to download ENSKMAG00000013348's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013348	rbm28	69	67.500	ENSG00000106344	RBM28	100	50.476	Homo_sapiens
ENSKMAG00000013348	rbm28	57	74.545	ENSAPOG00000015512	rbm28	58	74.610	Acanthochromis_polyacanthus
ENSKMAG00000013348	rbm28	96	60.920	ENSAMEG00000004776	RBM28	64	61.538	Ailuropoda_melanoleuca
ENSKMAG00000013348	rbm28	56	71.190	ENSACIG00000023153	rbm28	91	71.190	Amphilophus_citrinellus
ENSKMAG00000013348	rbm28	57	74.545	ENSAOCG00000000462	rbm28	58	74.610	Amphiprion_ocellaris
ENSKMAG00000013348	rbm28	57	74.318	ENSAPEG00000012996	rbm28	58	74.388	Amphiprion_percula
ENSKMAG00000013348	rbm28	84	67.500	ENSANAG00000033922	RBM28	80	67.500	Aotus_nancymaae
ENSKMAG00000013348	rbm28	99	66.235	ENSACLG00000025024	rbm28	59	72.727	Astatotilapia_calliptera
ENSKMAG00000013348	rbm28	58	59.226	ENSAMXG00000000763	rbm28	99	59.864	Astyanax_mexicanus
ENSKMAG00000013348	rbm28	73	67.500	ENSBTAG00000017001	RBM28	80	67.500	Bos_taurus
ENSKMAG00000013348	rbm28	84	67.500	ENSCJAG00000017731	RBM28	79	67.500	Callithrix_jacchus
ENSKMAG00000013348	rbm28	99	49.488	ENSCAFG00000001667	RBM28	99	50.394	Canis_familiaris
ENSKMAG00000013348	rbm28	99	49.488	ENSCAFG00020021648	RBM28	99	50.394	Canis_lupus_dingo
ENSKMAG00000013348	rbm28	62	54.025	ENSCHIG00000014146	RBM28	58	55.830	Capra_hircus
ENSKMAG00000013348	rbm28	65	65.000	ENSTSYG00000002892	RBM28	80	65.000	Carlito_syrichta
ENSKMAG00000013348	rbm28	99	49.559	ENSCPOG00000006253	RBM28	57	55.234	Cavia_porcellus
ENSKMAG00000013348	rbm28	82	67.500	ENSCCAG00000035105	RBM28	99	47.809	Cebus_capucinus
ENSKMAG00000013348	rbm28	69	67.500	ENSCATG00000040497	RBM28	79	67.500	Cercocebus_atys
ENSKMAG00000013348	rbm28	64	52.772	ENSCSAG00000010161	RBM28	58	55.056	Chlorocebus_sabaeus
ENSKMAG00000013348	rbm28	57	54.688	ENSCHOG00000001994	-	63	54.688	Choloepus_hoffmanni
ENSKMAG00000013348	rbm28	52	48.214	ENSCPBG00000018088	RBM28	88	50.483	Chrysemys_picta_bellii
ENSKMAG00000013348	rbm28	57	67.500	ENSCANG00000038397	RBM28	72	67.500	Colobus_angolensis_palliatus
ENSKMAG00000013348	rbm28	64	53.878	ENSCGRG00001021278	Rbm28	56	55.902	Cricetulus_griseus_chok1gshd
ENSKMAG00000013348	rbm28	64	53.878	ENSCGRG00000005098	Rbm28	58	55.902	Cricetulus_griseus_crigri
ENSKMAG00000013348	rbm28	99	63.289	ENSCSEG00000004212	rbm28	60	70.667	Cynoglossus_semilaevis
ENSKMAG00000013348	rbm28	59	74.107	ENSCVAG00000010493	rbm28	58	74.107	Cyprinodon_variegatus
ENSKMAG00000013348	rbm28	99	56.158	ENSDARG00000025332	rbm28	99	53.125	Danio_rerio
ENSKMAG00000013348	rbm28	99	50.570	ENSDNOG00000001124	RBM28	58	54.586	Dasypus_novemcinctus
ENSKMAG00000013348	rbm28	81	49.315	ENSDORG00000004184	Rbm28	88	53.125	Dipodomys_ordii
ENSKMAG00000013348	rbm28	86	33.770	FBgn0260456	CG4806	67	34.105	Drosophila_melanogaster
ENSKMAG00000013348	rbm28	56	51.069	ENSETEG00000007130	RBM28	55	51.069	Echinops_telfairi
ENSKMAG00000013348	rbm28	63	52.965	ENSEASG00005008528	RBM28	57	55.730	Equus_asinus_asinus
ENSKMAG00000013348	rbm28	63	52.761	ENSECAG00000007745	RBM28	57	55.506	Equus_caballus
ENSKMAG00000013348	rbm28	99	47.497	ENSEEUG00000002389	RBM28	58	50.223	Erinaceus_europaeus
ENSKMAG00000013348	rbm28	99	55.805	ENSELUG00000020602	rbm28	59	61.472	Esox_lucius
ENSKMAG00000013348	rbm28	99	51.688	ENSFDAG00000010169	RBM28	59	55.506	Fukomys_damarensis
ENSKMAG00000013348	rbm28	59	73.719	ENSGAFG00000004802	rbm28	98	73.719	Gambusia_affinis
ENSKMAG00000013348	rbm28	58	68.919	ENSGACG00000012612	rbm28	74	69.058	Gasterosteus_aculeatus
ENSKMAG00000013348	rbm28	99	40.633	ENSGAGG00000008873	RBM28	83	63.566	Gopherus_agassizii
ENSKMAG00000013348	rbm28	63	51.935	ENSGGOG00000004644	RBM28	59	53.982	Gorilla_gorilla
ENSKMAG00000013348	rbm28	94	66.303	ENSHBUG00000009611	rbm28	56	73.105	Haplochromis_burtoni
ENSKMAG00000013348	rbm28	99	49.936	ENSHGLG00000005409	RBM28	59	53.084	Heterocephalus_glaber_female
ENSKMAG00000013348	rbm28	99	49.936	ENSHGLG00100016458	RBM28	59	53.084	Heterocephalus_glaber_male
ENSKMAG00000013348	rbm28	83	54.176	ENSHCOG00000010597	rbm28	92	54.402	Hippocampus_comes
ENSKMAG00000013348	rbm28	63	44.491	ENSIPUG00000007103	rbm28	81	48.019	Ictalurus_punctatus
ENSKMAG00000013348	rbm28	99	49.744	ENSSTOG00000002169	RBM28	57	54.667	Ictidomys_tridecemlineatus
ENSKMAG00000013348	rbm28	99	48.026	ENSJJAG00000022400	Rbm28	59	53.991	Jaculus_jaculus
ENSKMAG00000013348	rbm28	59	69.488	ENSLBEG00000012998	rbm28	57	69.488	Labrus_bergylta
ENSKMAG00000013348	rbm28	99	58.247	ENSLOCG00000015541	rbm28	76	61.024	Lepisosteus_oculatus
ENSKMAG00000013348	rbm28	99	49.872	ENSLAFG00000010717	RBM28	58	54.566	Loxodonta_africana
ENSKMAG00000013348	rbm28	69	67.500	ENSMFAG00000031036	RBM28	79	67.500	Macaca_fascicularis
ENSKMAG00000013348	rbm28	69	67.500	ENSMMUG00000007250	RBM28	79	67.500	Macaca_mulatta
ENSKMAG00000013348	rbm28	99	50.132	ENSMNEG00000036970	RBM28	78	67.500	Macaca_nemestrina
ENSKMAG00000013348	rbm28	99	67.016	ENSMAMG00000008525	rbm28	99	66.273	Mastacembelus_armatus
ENSKMAG00000013348	rbm28	93	65.556	ENSMZEG00005019625	rbm28	64	72.727	Maylandia_zebra
ENSKMAG00000013348	rbm28	63	54.115	ENSMAUG00000002263	Rbm28	56	55.830	Mesocricetus_auratus
ENSKMAG00000013348	rbm28	63	51.731	ENSMICG00000000107	RBM28	60	54.505	Microcebus_murinus
ENSKMAG00000013348	rbm28	99	50.919	ENSMOCG00000014615	Rbm28	59	55.111	Microtus_ochrogaster
ENSKMAG00000013348	rbm28	58	64.977	ENSMMOG00000008600	rbm28	90	64.908	Mola_mola
ENSKMAG00000013348	rbm28	99	48.176	ENSMODG00000015151	RBM28	58	52.079	Monodelphis_domestica
ENSKMAG00000013348	rbm28	58	70.946	ENSMALG00000006419	rbm28	57	70.946	Monopterus_albus
ENSKMAG00000013348	rbm28	99	51.047	MGP_CAROLIEiJ_G0028162	Rbm28	59	54.911	Mus_caroli
ENSKMAG00000013348	rbm28	99	49.935	ENSMUSG00000029701	Rbm28	59	54.000	Mus_musculus
ENSKMAG00000013348	rbm28	99	50.129	MGP_PahariEiJ_G0021920	Rbm28	59	54.222	Mus_pahari
ENSKMAG00000013348	rbm28	99	50.328	MGP_SPRETEiJ_G0029162	Rbm28	59	54.464	Mus_spretus
ENSKMAG00000013348	rbm28	99	50.195	ENSMPUG00000006511	RBM28	58	55.134	Mustela_putorius_furo
ENSKMAG00000013348	rbm28	63	53.265	ENSMLUG00000002186	RBM28	57	54.831	Myotis_lucifugus
ENSKMAG00000013348	rbm28	99	50.195	ENSNGAG00000006480	-	99	48.966	Nannospalax_galili
ENSKMAG00000013348	rbm28	99	49.007	ENSNGAG00000017946	-	57	54.110	Nannospalax_galili
ENSKMAG00000013348	rbm28	69	67.500	ENSNLEG00000012307	RBM28	78	67.500	Nomascus_leucogenys
ENSKMAG00000013348	rbm28	82	61.963	ENSMEUG00000009611	RBM28	83	59.146	Notamacropus_eugenii
ENSKMAG00000013348	rbm28	99	48.964	ENSODEG00000003213	-	57	53.089	Octodon_degus
ENSKMAG00000013348	rbm28	89	44.798	ENSODEG00000013217	-	83	54.408	Octodon_degus
ENSKMAG00000013348	rbm28	99	66.115	ENSONIG00000014924	rbm28	99	66.796	Oreochromis_niloticus
ENSKMAG00000013348	rbm28	99	46.429	ENSOANG00000000815	-	59	50.330	Ornithorhynchus_anatinus
ENSKMAG00000013348	rbm28	65	51.411	ENSOCUG00000003009	RBM28	57	54.444	Oryctolagus_cuniculus
ENSKMAG00000013348	rbm28	100	65.966	ENSORLG00000009636	rbm28	59	72.321	Oryzias_latipes
ENSKMAG00000013348	rbm28	100	66.623	ENSORLG00020002123	rbm28	100	67.018	Oryzias_latipes_hni
ENSKMAG00000013348	rbm28	86	70.909	ENSORLG00015015030	rbm28	97	71.292	Oryzias_latipes_hsok
ENSKMAG00000013348	rbm28	59	73.111	ENSOMEG00000007801	rbm28	99	67.313	Oryzias_melastigma
ENSKMAG00000013348	rbm28	73	65.000	ENSOGAG00000006011	RBM28	77	65.000	Otolemur_garnettii
ENSKMAG00000013348	rbm28	99	51.923	ENSOARG00000002547	RBM28	58	56.054	Ovis_aries
ENSKMAG00000013348	rbm28	69	67.500	ENSPPAG00000041730	RBM28	79	67.500	Pan_paniscus
ENSKMAG00000013348	rbm28	69	67.500	ENSPTRG00000019659	RBM28	79	67.500	Pan_troglodytes
ENSKMAG00000013348	rbm28	69	67.500	ENSPANG00000022295	RBM28	79	67.500	Papio_anubis
ENSKMAG00000013348	rbm28	94	61.969	ENSPKIG00000023453	rbm28	100	53.558	Paramormyrops_kingsleyae
ENSKMAG00000013348	rbm28	99	57.257	ENSPMGG00000012840	rbm28	94	64.151	Periophthalmus_magnuspinnatus
ENSKMAG00000013348	rbm28	99	50.198	ENSPEMG00000020673	Rbm28	61	55.679	Peromyscus_maniculatus_bairdii
ENSKMAG00000013348	rbm28	99	50.000	ENSPCIG00000012810	RBM28	59	52.902	Phascolarctos_cinereus
ENSKMAG00000013348	rbm28	99	67.445	ENSPFOG00000018209	rbm28	59	74.222	Poecilia_formosa
ENSKMAG00000013348	rbm28	99	66.667	ENSPLAG00000016078	rbm28	56	73.767	Poecilia_latipinna
ENSKMAG00000013348	rbm28	99	67.228	ENSPMEG00000004292	rbm28	59	74.058	Poecilia_mexicana
ENSKMAG00000013348	rbm28	99	67.275	ENSPREG00000014287	rbm28	75	72.991	Poecilia_reticulata
ENSKMAG00000013348	rbm28	99	50.378	ENSPPYG00000017975	RBM28	58	55.506	Pongo_abelii
ENSKMAG00000013348	rbm28	74	50.704	ENSPCAG00000008223	RBM28	83	50.685	Procavia_capensis
ENSKMAG00000013348	rbm28	99	49.497	ENSPCOG00000016797	RBM28	79	67.500	Propithecus_coquereli
ENSKMAG00000013348	rbm28	73	60.000	ENSPVAG00000005443	RBM28	69	61.692	Pteropus_vampyrus
ENSKMAG00000013348	rbm28	99	66.365	ENSPNYG00000014003	rbm28	59	72.727	Pundamilia_nyererei
ENSKMAG00000013348	rbm28	99	50.654	ENSRNOG00000005468	Rbm28	59	55.034	Rattus_norvegicus
ENSKMAG00000013348	rbm28	69	67.500	ENSRBIG00000033990	RBM28	78	67.500	Rhinopithecus_bieti
ENSKMAG00000013348	rbm28	69	67.500	ENSRROG00000040747	RBM28	79	67.500	Rhinopithecus_roxellana
ENSKMAG00000013348	rbm28	96	47.995	ENSSHAG00000017017	RBM28	60	53.229	Sarcophilus_harrisii
ENSKMAG00000013348	rbm28	99	53.846	ENSSFOG00015001231	rbm28	60	58.166	Scleropages_formosus
ENSKMAG00000013348	rbm28	59	65.548	ENSSMAG00000003885	rbm28	91	65.256	Scophthalmus_maximus
ENSKMAG00000013348	rbm28	59	76.106	ENSSDUG00000014270	rbm28	93	73.739	Seriola_dumerili
ENSKMAG00000013348	rbm28	59	75.442	ENSSLDG00000020099	rbm28	58	75.442	Seriola_lalandi_dorsalis
ENSKMAG00000013348	rbm28	75	58.981	ENSSARG00000008303	RBM28	80	57.436	Sorex_araneus
ENSKMAG00000013348	rbm28	68	53.165	ENSSPUG00000000838	RBM28	82	52.902	Sphenodon_punctatus
ENSKMAG00000013348	rbm28	58	74.041	ENSSPAG00000023305	rbm28	62	74.444	Stegastes_partitus
ENSKMAG00000013348	rbm28	99	50.064	ENSSSCG00000031847	RBM28	58	55.605	Sus_scrofa
ENSKMAG00000013348	rbm28	99	58.003	ENSTRUG00000013311	rbm28	58	64.488	Takifugu_rubripes
ENSKMAG00000013348	rbm28	99	59.539	ENSTNIG00000017962	rbm28	59	67.920	Tetraodon_nigroviridis
ENSKMAG00000013348	rbm28	92	57.333	ENSTTRG00000013647	RBM28	88	56.356	Tursiops_truncatus
ENSKMAG00000013348	rbm28	99	47.876	ENSUAMG00000006949	RBM28	99	45.855	Ursus_americanus
ENSKMAG00000013348	rbm28	99	49.871	ENSUMAG00000005997	RBM28	58	54.586	Ursus_maritimus
ENSKMAG00000013348	rbm28	84	47.806	ENSVPAG00000008304	RBM28	77	52.518	Vicugna_pacos
ENSKMAG00000013348	rbm28	99	49.361	ENSVVUG00000007270	RBM28	99	50.262	Vulpes_vulpes
ENSKMAG00000013348	rbm28	63	48.381	ENSXETG00000009271	rbm28	58	50.545	Xenopus_tropicalis
ENSKMAG00000013348	rbm28	59	69.752	ENSXCOG00000020357	rbm28	92	69.752	Xiphophorus_couchianus
ENSKMAG00000013348	rbm28	99	67.368	ENSXMAG00000004415	rbm28	59	72.809	Xiphophorus_maculatus