EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013403 (Gene tree)
Gene ID: 108244183
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 37211 bases
Position: chrLWHD01000134.1:632903-670113
Accession: 108244183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000017992	TUDOR	PF00567.24	5.8e-80	1	4
ENSKMAP00000017992	TUDOR	PF00567.24	5.8e-80	2	4
ENSKMAP00000017992	TUDOR	PF00567.24	5.8e-80	3	4
ENSKMAP00000017992	TUDOR	PF00567.24	5.8e-80	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018243	-	5102	XM_017430138	ENSKMAP00000017992	1604 (aa)	XP_017285627	UPI0007F8951A

Gene Model

Click here to download ENSKMAG00000013403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013403	rnf17	98	31.761	ENSG00000132972	RNF17	99	35.879	Homo_sapiens
ENSKMAG00000013403	rnf17	95	65.984	ENSAPOG00000017034	rnf17	97	65.847	Acanthochromis_polyacanthus
ENSKMAG00000013403	rnf17	88	34.733	ENSAMEG00000017340	RNF17	89	34.758	Ailuropoda_melanoleuca
ENSKMAG00000013403	rnf17	99	68.306	ENSAOCG00000018283	rnf17	99	68.244	Amphiprion_ocellaris
ENSKMAG00000013403	rnf17	81	75.309	ENSAPEG00000022338	rnf17	92	75.309	Amphiprion_percula
ENSKMAG00000013403	rnf17	90	64.516	ENSATEG00000002067	rnf17	99	64.379	Anabas_testudineus
ENSKMAG00000013403	rnf17	87	30.875	ENSAPLG00000003969	RNF17	83	32.761	Anas_platyrhynchos
ENSKMAG00000013403	rnf17	75	34.513	ENSACAG00000001418	RNF17	76	33.971	Anolis_carolinensis
ENSKMAG00000013403	rnf17	71	31.142	ENSANAG00000029969	RNF17	95	31.450	Aotus_nancymaae
ENSKMAG00000013403	rnf17	99	67.600	ENSACLG00000018279	rnf17	100	67.413	Astatotilapia_calliptera
ENSKMAG00000013403	rnf17	91	47.929	ENSAMXG00000011002	rnf17	99	48.354	Astyanax_mexicanus
ENSKMAG00000013403	rnf17	55	35.052	ENSBTAG00000000278	RNF17	99	34.757	Bos_taurus
ENSKMAG00000013403	rnf17	73	34.919	ENSCJAG00000018937	RNF17	99	35.901	Callithrix_jacchus
ENSKMAG00000013403	rnf17	86	35.220	ENSCAFG00000007418	RNF17	88	35.190	Canis_familiaris
ENSKMAG00000013403	rnf17	55	34.024	ENSCAFG00020002919	-	99	34.273	Canis_lupus_dingo
ENSKMAG00000013403	rnf17	73	35.008	ENSCHIG00000026716	RNF17	99	35.052	Capra_hircus
ENSKMAG00000013403	rnf17	87	34.835	ENSTSYG00000000365	RNF17	99	35.242	Carlito_syrichta
ENSKMAG00000013403	rnf17	87	35.012	ENSCCAG00000026725	RNF17	99	35.451	Cebus_capucinus
ENSKMAG00000013403	rnf17	98	31.696	ENSCATG00000040352	RNF17	99	36.029	Cercocebus_atys
ENSKMAG00000013403	rnf17	98	31.675	ENSCLAG00000004127	RNF17	97	31.675	Chinchilla_lanigera
ENSKMAG00000013403	rnf17	98	31.265	ENSCSAG00000018019	RNF17	88	35.105	Chlorocebus_sabaeus
ENSKMAG00000013403	rnf17	53	45.185	ENSCHOG00000013310	RNF17	56	45.185	Choloepus_hoffmanni
ENSKMAG00000013403	rnf17	92	31.842	ENSCPBG00000020920	RNF17	97	31.907	Chrysemys_picta_bellii
ENSKMAG00000013403	rnf17	98	31.224	ENSCANG00000032927	RNF17	99	35.797	Colobus_angolensis_palliatus
ENSKMAG00000013403	rnf17	88	34.797	ENSCGRG00001022658	Rnf17	90	34.480	Cricetulus_griseus_chok1gshd
ENSKMAG00000013403	rnf17	88	34.797	ENSCGRG00000009924	Rnf17	90	34.480	Cricetulus_griseus_crigri
ENSKMAG00000013403	rnf17	95	55.080	ENSCSEG00000008626	rnf17	99	55.164	Cynoglossus_semilaevis
ENSKMAG00000013403	rnf17	76	58.257	ENSCVAG00000017008	rnf17	94	58.044	Cyprinodon_variegatus
ENSKMAG00000013403	rnf17	99	43.008	ENSDARG00000056387	rnf17	77	46.393	Danio_rerio
ENSKMAG00000013403	rnf17	50	38.053	ENSEASG00005001421	-	99	38.053	Equus_asinus_asinus
ENSKMAG00000013403	rnf17	58	33.047	ENSEEUG00000000332	RNF17	65	33.047	Erinaceus_europaeus
ENSKMAG00000013403	rnf17	99	48.250	ENSELUG00000005626	rnf17	99	48.225	Esox_lucius
ENSKMAG00000013403	rnf17	88	35.395	ENSFCAG00000004914	RNF17	99	34.661	Felis_catus
ENSKMAG00000013403	rnf17	77	32.118	ENSFALG00000008766	RNF17	79	32.547	Ficedula_albicollis
ENSKMAG00000013403	rnf17	98	30.732	ENSFDAG00000017857	RNF17	74	34.215	Fukomys_damarensis
ENSKMAG00000013403	rnf17	100	64.224	ENSFHEG00000014822	rnf17	100	64.224	Fundulus_heteroclitus
ENSKMAG00000013403	rnf17	50	37.826	ENSGALG00000045414	-	96	37.826	Gallus_gallus
ENSKMAG00000013403	rnf17	76	72.881	ENSGAFG00000004463	rnf17	94	72.881	Gambusia_affinis
ENSKMAG00000013403	rnf17	54	62.885	ENSGACG00000001340	-	100	62.885	Gasterosteus_aculeatus
ENSKMAG00000013403	rnf17	91	30.520	ENSGAGG00000016999	RNF17	90	30.288	Gopherus_agassizii
ENSKMAG00000013403	rnf17	98	31.347	ENSGGOG00000014491	RNF17	99	35.942	Gorilla_gorilla
ENSKMAG00000013403	rnf17	99	67.662	ENSHBUG00000003554	rnf17	100	67.475	Haplochromis_burtoni
ENSKMAG00000013403	rnf17	82	75.758	ENSHCOG00000017676	rnf17	96	75.758	Hippocampus_comes
ENSKMAG00000013403	rnf17	86	48.603	ENSIPUG00000001087	rnf17	93	48.518	Ictalurus_punctatus
ENSKMAG00000013403	rnf17	55	32.143	ENSSTOG00000011255	-	99	31.679	Ictidomys_tridecemlineatus
ENSKMAG00000013403	rnf17	98	31.239	ENSJJAG00000016584	Rnf17	97	30.935	Jaculus_jaculus
ENSKMAG00000013403	rnf17	90	58.276	ENSLBEG00000014910	rnf17	96	58.140	Labrus_bergylta
ENSKMAG00000013403	rnf17	71	32.326	ENSLACG00000000323	RNF17	82	36.459	Latimeria_chalumnae
ENSKMAG00000013403	rnf17	100	36.242	ENSLOCG00000010768	rnf17	99	36.242	Lepisosteus_oculatus
ENSKMAG00000013403	rnf17	98	31.696	ENSMFAG00000032388	RNF17	99	36.176	Macaca_fascicularis
ENSKMAG00000013403	rnf17	98	31.878	ENSMMUG00000014610	RNF17	99	36.176	Macaca_mulatta
ENSKMAG00000013403	rnf17	98	31.696	ENSMNEG00000011234	RNF17	99	36.176	Macaca_nemestrina
ENSKMAG00000013403	rnf17	98	31.554	ENSMLEG00000030227	RNF17	88	35.242	Mandrillus_leucophaeus
ENSKMAG00000013403	rnf17	86	65.432	ENSMAMG00000020403	rnf17	99	65.432	Mastacembelus_armatus
ENSKMAG00000013403	rnf17	99	67.786	ENSMZEG00005019166	rnf17	100	67.600	Maylandia_zebra
ENSKMAG00000013403	rnf17	73	32.790	ENSMGAG00000015138	RNF17	96	32.571	Meleagris_gallopavo
ENSKMAG00000013403	rnf17	98	30.852	ENSMAUG00000004788	Rnf17	89	34.319	Mesocricetus_auratus
ENSKMAG00000013403	rnf17	99	31.016	ENSMICG00000010364	RNF17	99	34.261	Microcebus_murinus
ENSKMAG00000013403	rnf17	58	35.374	ENSMOCG00000011818	-	99	35.074	Microtus_ochrogaster
ENSKMAG00000013403	rnf17	81	83.333	ENSMMOG00000019514	rnf17	92	83.333	Mola_mola
ENSKMAG00000013403	rnf17	99	32.031	ENSMODG00000007827	RNF17	86	35.356	Monodelphis_domestica
ENSKMAG00000013403	rnf17	89	59.723	ENSMALG00000016943	rnf17	98	59.629	Monopterus_albus
ENSKMAG00000013403	rnf17	90	34.416	MGP_CAROLIEiJ_G0019337	Rnf17	89	34.448	Mus_caroli
ENSKMAG00000013403	rnf17	98	31.824	ENSMUSG00000000365	Rnf17	89	34.603	Mus_musculus
ENSKMAG00000013403	rnf17	89	34.634	MGP_PahariEiJ_G0030355	Rnf17	90	34.477	Mus_pahari
ENSKMAG00000013403	rnf17	90	34.837	MGP_SPRETEiJ_G0020228	Rnf17	89	34.837	Mus_spretus
ENSKMAG00000013403	rnf17	99	31.381	ENSMPUG00000013305	RNF17	89	34.765	Mustela_putorius_furo
ENSKMAG00000013403	rnf17	86	34.544	ENSMLUG00000003903	RNF17	88	34.488	Myotis_lucifugus
ENSKMAG00000013403	rnf17	99	32.079	ENSNGAG00000013553	Rnf17	98	32.045	Nannospalax_galili
ENSKMAG00000013403	rnf17	82	64.268	ENSNBRG00000012006	rnf17	94	63.844	Neolamprologus_brichardi
ENSKMAG00000013403	rnf17	98	31.485	ENSNLEG00000013780	RNF17	99	36.257	Nomascus_leucogenys
ENSKMAG00000013403	rnf17	53	43.103	ENSMEUG00000003276	-	51	43.103	Notamacropus_eugenii
ENSKMAG00000013403	rnf17	50	39.726	ENSOPRG00000016743	-	52	39.726	Ochotona_princeps
ENSKMAG00000013403	rnf17	99	67.516	ENSONIG00000015746	rnf17	100	68.201	Oreochromis_niloticus
ENSKMAG00000013403	rnf17	99	30.992	ENSOCUG00000007384	RNF17	88	34.715	Oryctolagus_cuniculus
ENSKMAG00000013403	rnf17	88	57.002	ENSORLG00000012818	rnf17	99	57.143	Oryzias_latipes
ENSKMAG00000013403	rnf17	99	56.965	ENSORLG00020009879	-	100	57.027	Oryzias_latipes_hni
ENSKMAG00000013403	rnf17	99	57.044	ENSORLG00015013027	-	99	57.295	Oryzias_latipes_hsok
ENSKMAG00000013403	rnf17	74	59.664	ENSOMEG00000009891	rnf17	95	59.350	Oryzias_melastigma
ENSKMAG00000013403	rnf17	73	34.541	ENSOGAG00000014803	RNF17	74	34.461	Otolemur_garnettii
ENSKMAG00000013403	rnf17	98	32.188	ENSOARG00000014641	RNF17	74	34.878	Ovis_aries
ENSKMAG00000013403	rnf17	77	34.793	ENSPPAG00000028779	RNF17	99	35.735	Pan_paniscus
ENSKMAG00000013403	rnf17	89	35.476	ENSPPRG00000009230	RNF17	99	34.808	Panthera_pardus
ENSKMAG00000013403	rnf17	89	35.476	ENSPTIG00000001738	RNF17	99	34.610	Panthera_tigris_altaica
ENSKMAG00000013403	rnf17	98	31.952	ENSPTRG00000005713	RNF17	99	35.735	Pan_troglodytes
ENSKMAG00000013403	rnf17	98	31.652	ENSPANG00000007640	RNF17	99	36.029	Papio_anubis
ENSKMAG00000013403	rnf17	79	44.556	ENSPKIG00000001648	rnf17	90	46.160	Paramormyrops_kingsleyae
ENSKMAG00000013403	rnf17	73	35.004	ENSPSIG00000011245	RNF17	99	35.407	Pelodiscus_sinensis
ENSKMAG00000013403	rnf17	89	35.000	ENSPEMG00000008693	Rnf17	88	34.842	Peromyscus_maniculatus_bairdii
ENSKMAG00000013403	rnf17	73	35.881	ENSPCIG00000009190	-	92	35.563	Phascolarctos_cinereus
ENSKMAG00000013403	rnf17	99	65.290	ENSPFOG00000007124	rnf17	100	65.581	Poecilia_formosa
ENSKMAG00000013403	rnf17	100	67.143	ENSPLAG00000006198	rnf17	100	67.081	Poecilia_latipinna
ENSKMAG00000013403	rnf17	100	67.205	ENSPMEG00000022432	rnf17	100	67.205	Poecilia_mexicana
ENSKMAG00000013403	rnf17	82	71.429	ENSPREG00000001414	rnf17	94	71.429	Poecilia_reticulata
ENSKMAG00000013403	rnf17	98	31.566	ENSPPYG00000005215	RNF17	88	34.859	Pongo_abelii
ENSKMAG00000013403	rnf17	71	42.754	ENSPVAG00000013021	RNF17	72	42.754	Pteropus_vampyrus
ENSKMAG00000013403	rnf17	93	48.610	ENSPNAG00000027505	rnf17	99	51.602	Pygocentrus_nattereri
ENSKMAG00000013403	rnf17	87	34.221	ENSRNOG00000008059	Rnf17	89	34.038	Rattus_norvegicus
ENSKMAG00000013403	rnf17	98	31.145	ENSRBIG00000027010	RNF17	86	34.187	Rhinopithecus_bieti
ENSKMAG00000013403	rnf17	98	31.126	ENSRROG00000022801	RNF17	99	35.849	Rhinopithecus_roxellana
ENSKMAG00000013403	rnf17	73	35.000	ENSSBOG00000021661	RNF17	99	35.808	Saimiri_boliviensis_boliviensis
ENSKMAG00000013403	rnf17	99	32.369	ENSSHAG00000005609	RNF17	98	32.151	Sarcophilus_harrisii
ENSKMAG00000013403	rnf17	73	43.086	ENSSFOG00015023037	rnf17	89	43.086	Scleropages_formosus
ENSKMAG00000013403	rnf17	90	61.172	ENSSMAG00000007429	rnf17	98	60.967	Scophthalmus_maximus
ENSKMAG00000013403	rnf17	90	67.031	ENSSDUG00000013530	rnf17	100	66.849	Seriola_dumerili
ENSKMAG00000013403	rnf17	90	67.916	ENSSLDG00000019577	rnf17	99	67.847	Seriola_lalandi_dorsalis
ENSKMAG00000013403	rnf17	66	33.929	ENSSARG00000003016	RNF17	62	33.929	Sorex_araneus
ENSKMAG00000013403	rnf17	89	32.205	ENSSPUG00000008917	RNF17	80	34.370	Sphenodon_punctatus
ENSKMAG00000013403	rnf17	89	65.014	ENSSPAG00000001925	rnf17	99	64.665	Stegastes_partitus
ENSKMAG00000013403	rnf17	98	31.519	ENSSSCG00000009572	RNF17	82	34.653	Sus_scrofa
ENSKMAG00000013403	rnf17	63	33.427	ENSTGUG00000011267	-	100	33.427	Taeniopygia_guttata
ENSKMAG00000013403	rnf17	99	50.309	ENSTRUG00000015498	rnf17	97	55.863	Takifugu_rubripes
ENSKMAG00000013403	rnf17	73	54.698	ENSTNIG00000015681	rnf17	99	54.484	Tetraodon_nigroviridis
ENSKMAG00000013403	rnf17	80	37.759	ENSTBEG00000000282	RNF17	62	37.759	Tupaia_belangeri
ENSKMAG00000013403	rnf17	95	34.848	ENSTTRG00000012698	RNF17	85	34.995	Tursiops_truncatus
ENSKMAG00000013403	rnf17	55	33.139	ENSUMAG00000013953	-	99	33.285	Ursus_maritimus
ENSKMAG00000013403	rnf17	83	45.070	ENSVPAG00000011388	RNF17	66	45.070	Vicugna_pacos
ENSKMAG00000013403	rnf17	88	35.352	ENSVVUG00000006226	RNF17	89	35.352	Vulpes_vulpes
ENSKMAG00000013403	rnf17	69	31.494	ENSXETG00000034020	RNF17	99	38.765	Xenopus_tropicalis
ENSKMAG00000013403	rnf17	90	61.947	ENSXCOG00000018295	rnf17	99	62.560	Xiphophorus_couchianus
ENSKMAG00000013403	rnf17	90	63.580	ENSXMAG00000014747	rnf17	99	63.786	Xiphophorus_maculatus