EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000013495 (Gene tree)
Gene ID: 108233874
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix protein 3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 109770 bases
Position: chrLWHD01000023.1:3906954-4016723
Accession: 108233874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000018122	cwf21	PF08312.12	1.7e-15	1	1
ENSKMAP00000018122	SRRM_C	PF15230.6	6.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018376	SRRM3-201	4083	XM_017412595	ENSKMAP00000018122	644 (aa)	XP_017268084	UPI0007F89E41

Gene Model

Click here to download ENSKMAG00000013495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013495	SRRM3	87	80.810	ENSAPOG00000000288	SRRM3	88	80.977	Acanthochromis_polyacanthus
ENSKMAG00000013495	SRRM3	87	77.289	ENSACLG00000005269	SRRM3	88	77.661	Astatotilapia_calliptera
ENSKMAG00000013495	SRRM3	87	53.401	ENSAMXG00000016051	-	88	51.163	Astyanax_mexicanus
ENSKMAG00000013495	SRRM3	87	43.372	ENSCPBG00000027784	SRRM3	90	43.710	Chrysemys_picta_bellii
ENSKMAG00000013495	SRRM3	87	70.884	ENSCSEG00000010978	-	80	71.134	Cynoglossus_semilaevis
ENSKMAG00000013495	SRRM3	87	81.690	ENSGAFG00000014777	SRRM3	88	81.675	Gambusia_affinis
ENSKMAG00000013495	SRRM3	87	43.831	ENSGAGG00000021058	SRRM3	96	42.244	Gopherus_agassizii
ENSKMAG00000013495	SRRM3	87	78.032	ENSHBUG00000005061	SRRM3	88	78.010	Haplochromis_burtoni
ENSKMAG00000013495	SRRM3	87	49.571	ENSIPUG00000012467	srrm3	88	52.300	Ictalurus_punctatus
ENSKMAG00000013495	SRRM3	51	55.182	ENSLOCG00000002879	SRRM3	98	55.587	Lepisosteus_oculatus
ENSKMAG00000013495	SRRM3	89	77.530	ENSMALG00000000844	-	90	77.700	Monopterus_albus
ENSKMAG00000013495	SRRM3	88	57.471	ENSONIG00000012732	-	98	57.516	Oreochromis_niloticus
ENSKMAG00000013495	SRRM3	88	76.091	ENSORLG00000026242	-	90	76.307	Oryzias_latipes
ENSKMAG00000013495	SRRM3	100	72.699	ENSORLG00020016592	-	90	76.132	Oryzias_latipes_hni
ENSKMAG00000013495	SRRM3	88	75.916	ENSORLG00015022712	SRRM3	90	76.132	Oryzias_latipes_hsok
ENSKMAG00000013495	SRRM3	100	73.773	ENSOMEG00000010768	-	89	76.655	Oryzias_melastigma
ENSKMAG00000013495	SRRM3	87	51.342	ENSPKIG00000017233	SRRM3	93	50.746	Paramormyrops_kingsleyae
ENSKMAG00000013495	SRRM3	87	60.980	ENSPFOG00000009007	SRRM3	90	59.631	Poecilia_formosa
ENSKMAG00000013495	SRRM3	87	80.458	ENSPMEG00000011981	-	88	80.977	Poecilia_mexicana
ENSKMAG00000013495	SRRM3	87	82.862	ENSPREG00000008138	-	88	82.837	Poecilia_reticulata
ENSKMAG00000013495	SRRM3	87	54.746	ENSPNAG00000009621	SRRM3	87	54.223	Pygocentrus_nattereri
ENSKMAG00000013495	SRRM3	61	52.019	ENSSFOG00015001696	SRRM3	78	58.232	Scleropages_formosus
ENSKMAG00000013495	SRRM3	87	80.000	ENSSMAG00000000476	SRRM3	89	80.174	Scophthalmus_maximus
ENSKMAG00000013495	SRRM3	87	79.690	ENSSLDG00000020070	SRRM3	88	79.863	Seriola_lalandi_dorsalis
ENSKMAG00000013495	SRRM3	87	80.986	ENSXMAG00000005663	-	88	81.501	Xiphophorus_maculatus