EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000013631 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 6560 bases
Position: chrLWHD01001942.1:5447-12006
Accession: 108229131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000018336	RRM_1	PF00076.22	3.4e-32	1	2
ENSKMAP00000018336	RRM_1	PF00076.22	3.4e-32	2	2
ENSKMAP00000018359	RRM_1	PF00076.22	6e-32	1	2
ENSKMAP00000018359	RRM_1	PF00076.22	6e-32	2	2
ENSKMAP00000018374	RRM_1	PF00076.22	2e-27	1	2
ENSKMAP00000018374	RRM_1	PF00076.22	2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018630	-	768	-	ENSKMAP00000018374	255 (aa)	-	-
ENSKMAT00000018592	-	870	-	ENSKMAP00000018336	289 (aa)	-	-
ENSKMAT00000018615	-	1050	XM_017404792	ENSKMAP00000018359	349 (aa)	XP_017260281	-

Gene Model

Click here to download ENSKMAG00000013631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000013631	srsf4	80	52.582	ENSKMAG00000014937	srsf5a	57	62.703
ENSKMAG00000013631	srsf4	79	40.496	ENSKMAG00000019232	srsf1a	96	40.244
ENSKMAG00000013631	srsf4	81	34.722	ENSKMAG00000007113	srsf9	74	42.935
ENSKMAG00000013631	srsf4	97	62.857	ENSKMAG00000011934	srsf6a	59	80.000
ENSKMAG00000013631	srsf4	79	54.854	ENSKMAG00000020486	srsf5b	83	62.400

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013631	srsf4	81	74.879	ENSG00000116350	SRSF4	69	77.419	Homo_sapiens
ENSKMAG00000013631	srsf4	85	73.981	ENSAPOG00000020244	srsf4	92	76.093	Acanthochromis_polyacanthus
ENSKMAG00000013631	srsf4	95	56.207	ENSAPOG00000023399	-	90	49.624	Acanthochromis_polyacanthus
ENSKMAG00000013631	srsf4	82	80.288	ENSACIG00000018649	srsf4	90	95.588	Amphilophus_citrinellus
ENSKMAG00000013631	srsf4	75	76.562	ENSAOCG00000005997	srsf4	92	92.121	Amphiprion_ocellaris
ENSKMAG00000013631	srsf4	80	80.476	ENSATEG00000005680	srsf4	60	92.308	Anabas_testudineus
ENSKMAG00000013631	srsf4	81	74.879	ENSANAG00000037134	SRSF4	69	66.230	Aotus_nancymaae
ENSKMAG00000013631	srsf4	82	79.808	ENSACLG00000003395	srsf4	89	95.588	Astatotilapia_calliptera
ENSKMAG00000013631	srsf4	81	65.714	ENSACLG00000021269	-	58	70.142	Astatotilapia_calliptera
ENSKMAG00000013631	srsf4	82	77.885	ENSAMXG00000034811	srsf4	81	89.157	Astyanax_mexicanus
ENSKMAG00000013631	srsf4	93	42.951	WBGene00004698	rsp-1	97	52.703	Caenorhabditis_elegans
ENSKMAG00000013631	srsf4	81	74.879	ENSCHIG00000022096	SRSF4	53	65.625	Capra_hircus
ENSKMAG00000013631	srsf4	96	47.297	ENSCING00000011362	-	65	58.919	Ciona_intestinalis
ENSKMAG00000013631	srsf4	90	42.038	ENSCING00000024718	-	56	59.585	Ciona_intestinalis
ENSKMAG00000013631	srsf4	81	51.802	ENSCING00000020631	-	80	60.513	Ciona_intestinalis
ENSKMAG00000013631	srsf4	84	53.361	ENSCING00000012370	-	81	52.256	Ciona_intestinalis
ENSKMAG00000013631	srsf4	94	52.797	ENSCSAVG00000002581	-	93	48.649	Ciona_savignyi
ENSKMAG00000013631	srsf4	81	74.879	ENSCGRG00001021115	Srsf4	52	69.582	Cricetulus_griseus_chok1gshd
ENSKMAG00000013631	srsf4	82	76.279	ENSCSEG00000010058	srsf4	76	89.516	Cynoglossus_semilaevis
ENSKMAG00000013631	srsf4	78	60.851	ENSCVAG00000004342	srsf4	85	58.964	Cyprinodon_variegatus
ENSKMAG00000013631	srsf4	82	75.238	ENSDARG00000105293	srsf4	80	88.235	Danio_rerio
ENSKMAG00000013631	srsf4	80	54.976	FBgn0004587	B52	95	60.938	Drosophila_melanogaster
ENSKMAG00000013631	srsf4	73	51.596	ENSEBUG00000003129	srsf4	69	61.039	Eptatretus_burgeri
ENSKMAG00000013631	srsf4	87	54.054	ENSEBUG00000005588	srsf4	53	57.789	Eptatretus_burgeri
ENSKMAG00000013631	srsf4	90	51.064	ENSEBUG00000001681	srsf4	67	62.983	Eptatretus_burgeri
ENSKMAG00000013631	srsf4	81	74.879	ENSEEUG00000008479	SRSF4	53	68.327	Erinaceus_europaeus
ENSKMAG00000013631	srsf4	94	58.278	ENSELUG00000017551	srsf4	93	77.099	Esox_lucius
ENSKMAG00000013631	srsf4	88	81.994	ENSFHEG00000007472	srsf4	91	97.647	Fundulus_heteroclitus
ENSKMAG00000013631	srsf4	81	76.329	ENSGMOG00000012906	srsf4	57	90.556	Gadus_morhua
ENSKMAG00000013631	srsf4	91	81.545	ENSGAFG00000018496	srsf4	83	95.588	Gambusia_affinis
ENSKMAG00000013631	srsf4	82	79.808	ENSGACG00000002389	srsf4	63	88.406	Gasterosteus_aculeatus
ENSKMAG00000013631	srsf4	81	65.714	ENSHBUG00000011326	-	51	66.351	Haplochromis_burtoni
ENSKMAG00000013631	srsf4	79	95.455	ENSHCOG00000012540	srsf4	97	95.455	Hippocampus_comes
ENSKMAG00000013631	srsf4	80	65.072	ENSLOCG00000001442	-	86	57.143	Lepisosteus_oculatus
ENSKMAG00000013631	srsf4	81	74.757	ENSLAFG00000002575	SRSF4	61	69.434	Loxodonta_africana
ENSKMAG00000013631	srsf4	81	74.879	ENSMMUG00000007110	SRSF4	63	64.912	Macaca_mulatta
ENSKMAG00000013631	srsf4	90	77.068	ENSMAMG00000004888	srsf4	77	95.588	Mastacembelus_armatus
ENSKMAG00000013631	srsf4	82	79.808	ENSMZEG00005026275	srsf4	74	89.888	Maylandia_zebra
ENSKMAG00000013631	srsf4	81	74.879	ENSMOCG00000013319	Srsf4	53	70.260	Microtus_ochrogaster
ENSKMAG00000013631	srsf4	91	75.285	ENSMMOG00000013653	srsf4	81	95.588	Mola_mola
ENSKMAG00000013631	srsf4	81	75.243	ENSMODG00000011052	SRSF4	79	64.423	Monodelphis_domestica
ENSKMAG00000013631	srsf4	92	76.015	ENSMALG00000013392	srsf4	66	95.402	Monopterus_albus
ENSKMAG00000013631	srsf4	81	60.766	ENSNLEG00000030787	-	62	72.000	Nomascus_leucogenys
ENSKMAG00000013631	srsf4	81	81.159	ENSONIG00000013730	srsf4	83	71.429	Oreochromis_niloticus
ENSKMAG00000013631	srsf4	63	76.712	ENSORLG00000009430	-	78	67.593	Oryzias_latipes
ENSKMAG00000013631	srsf4	82	79.426	ENSORLG00020016052	srsf4	66	93.956	Oryzias_latipes_hni
ENSKMAG00000013631	srsf4	88	73.494	ENSORLG00015007566	srsf4	85	95.588	Oryzias_latipes_hsok
ENSKMAG00000013631	srsf4	88	75.394	ENSOMEG00000005541	srsf4	88	77.389	Oryzias_melastigma
ENSKMAG00000013631	srsf4	82	75.342	ENSPMGG00000013436	srsf4	96	87.692	Periophthalmus_magnuspinnatus
ENSKMAG00000013631	srsf4	80	55.502	ENSPMAG00000009397	srsf4	68	65.775	Petromyzon_marinus
ENSKMAG00000013631	srsf4	97	74.462	ENSPFOG00000001306	srsf4	94	74.576	Poecilia_formosa
ENSKMAG00000013631	srsf4	80	95.522	ENSPLAG00000008812	srsf4	91	92.754	Poecilia_latipinna
ENSKMAG00000013631	srsf4	81	95.522	ENSPMEG00000023638	srsf4	91	92.754	Poecilia_mexicana
ENSKMAG00000013631	srsf4	81	95.522	ENSPREG00000009639	srsf4	98	92.754	Poecilia_reticulata
ENSKMAG00000013631	srsf4	81	74.879	ENSPCAG00000009879	SRSF4	60	61.736	Procavia_capensis
ENSKMAG00000013631	srsf4	82	77.143	ENSPNYG00000003796	srsf4	80	70.139	Pundamilia_nyererei
ENSKMAG00000013631	srsf4	80	78.431	ENSPNAG00000023844	srsf4	54	89.560	Pygocentrus_nattereri
ENSKMAG00000013631	srsf4	69	70.857	ENSSHAG00000012407	SRSF4	51	82.895	Sarcophilus_harrisii
ENSKMAG00000013631	srsf4	80	77.561	ENSSFOG00015020292	srsf4	82	90.090	Scleropages_formosus
ENSKMAG00000013631	srsf4	82	80.374	ENSSMAG00000001707	srsf4	50	90.270	Scophthalmus_maximus
ENSKMAG00000013631	srsf4	82	78.365	ENSSDUG00000007387	srsf4	81	74.306	Seriola_dumerili
ENSKMAG00000013631	srsf4	82	68.269	ENSSLDG00000009745	srsf4	62	82.081	Seriola_lalandi_dorsalis
ENSKMAG00000013631	srsf4	91	75.090	ENSSPAG00000014538	srsf4	90	95.588	Stegastes_partitus
ENSKMAG00000013631	srsf4	88	80.889	ENSTRUG00000011891	srsf4	63	88.144	Takifugu_rubripes
ENSKMAG00000013631	srsf4	81	63.889	ENSXCOG00000003212	-	73	61.508	Xiphophorus_couchianus
ENSKMAG00000013631	srsf4	99	75.281	ENSXCOG00000018826	srsf4	89	94.068	Xiphophorus_couchianus