EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000013704 (Gene tree)
Gene ID: 108242020
Gene Symbol: rbm12b (1 of many)
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 4223 bases
Position: chrLWHD01000093.1:288752-292974
Accession: 108242020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000018395	RRM_1	PF00076.22	8.4e-36	1	3
ENSKMAP00000018395	RRM_1	PF00076.22	8.4e-36	2	3
ENSKMAP00000018395	RRM_1	PF00076.22	8.4e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000018651	-	2319	XM_017426578	ENSKMAP00000018395	658 (aa)	XP_017282067	UPI0007F8C038

Gene Model

Click here to download ENSKMAG00000013704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000013704	rbm12b	96	32.955	ENSKMAG00000020517	hnrnph3	91	32.955
ENSKMAG00000013704	rbm12b	97	97.008	ENSKMAG00000013715	rbm12b	100	97.008
ENSKMAG00000013704	rbm12b	68	30.986	ENSKMAG00000004528	grsf1	75	30.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013704	rbm12b	83	47.368	ENSG00000183808	RBM12B	99	75.309	Homo_sapiens
ENSKMAG00000013704	rbm12b	97	61.478	ENSAPOG00000013963	rbm12b	100	61.478	Acanthochromis_polyacanthus
ENSKMAG00000013704	rbm12b	83	46.053	ENSAMEG00000007134	RBM12B	66	46.053	Ailuropoda_melanoleuca
ENSKMAG00000013704	rbm12b	74	60.128	ENSACIG00000014943	rbm12b	97	60.870	Amphilophus_citrinellus
ENSKMAG00000013704	rbm12b	97	61.635	ENSAOCG00000024270	rbm12b	100	61.635	Amphiprion_ocellaris
ENSKMAG00000013704	rbm12b	95	39.839	ENSAPEG00000022079	rbm12b	99	57.843	Amphiprion_percula
ENSKMAG00000013704	rbm12b	71	50.000	ENSATEG00000001886	zgc:153215	76	48.810	Anabas_testudineus
ENSKMAG00000013704	rbm12b	97	59.346	ENSATEG00000004578	rbm12b	97	59.655	Anabas_testudineus
ENSKMAG00000013704	rbm12b	97	37.063	ENSAPLG00000002020	RBM12B	99	37.712	Anas_platyrhynchos
ENSKMAG00000013704	rbm12b	85	42.857	ENSACAG00000003463	RBM12B	57	42.857	Anolis_carolinensis
ENSKMAG00000013704	rbm12b	83	47.368	ENSANAG00000034015	RBM12B	67	47.368	Aotus_nancymaae
ENSKMAG00000013704	rbm12b	97	61.466	ENSACLG00000005575	rbm12b	98	61.466	Astatotilapia_calliptera
ENSKMAG00000013704	rbm12b	97	52.442	ENSACLG00000005578	rbm12b	100	52.442	Astatotilapia_calliptera
ENSKMAG00000013704	rbm12b	97	42.593	ENSAMXG00000041973	rbm12b	100	43.011	Astyanax_mexicanus
ENSKMAG00000013704	rbm12b	72	57.143	ENSAMXG00000020853	zgc:153215	68	57.143	Astyanax_mexicanus
ENSKMAG00000013704	rbm12b	83	47.368	ENSBTAG00000013408	RBM12B	65	47.368	Bos_taurus
ENSKMAG00000013704	rbm12b	83	47.368	ENSCAFG00000009109	RBM12B	56	47.368	Canis_familiaris
ENSKMAG00000013704	rbm12b	83	47.368	ENSCAFG00020012203	RBM12B	64	47.368	Canis_lupus_dingo
ENSKMAG00000013704	rbm12b	71	40.741	ENSCHIG00000006790	RBM12B	67	40.535	Capra_hircus
ENSKMAG00000013704	rbm12b	83	46.053	ENSTSYG00000012515	RBM12B	57	46.053	Carlito_syrichta
ENSKMAG00000013704	rbm12b	83	48.684	ENSCAPG00000003543	RBM12B	59	48.684	Cavia_aperea
ENSKMAG00000013704	rbm12b	83	48.684	ENSCPOG00000007815	RBM12B	59	48.684	Cavia_porcellus
ENSKMAG00000013704	rbm12b	83	47.368	ENSCATG00000030769	RBM12B	65	47.368	Cercocebus_atys
ENSKMAG00000013704	rbm12b	83	48.684	ENSCLAG00000017617	RBM12B	59	48.684	Chinchilla_lanigera
ENSKMAG00000013704	rbm12b	83	47.368	ENSCSAG00000018559	RBM12B	56	47.368	Chlorocebus_sabaeus
ENSKMAG00000013704	rbm12b	81	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSKMAG00000013704	rbm12b	96	37.765	ENSCPBG00000003061	RBM12B	99	37.464	Chrysemys_picta_bellii
ENSKMAG00000013704	rbm12b	84	47.368	ENSCANG00000030379	RBM12B	66	47.368	Colobus_angolensis_palliatus
ENSKMAG00000013704	rbm12b	85	50.000	ENSCGRG00001008710	-	67	50.000	Cricetulus_griseus_chok1gshd
ENSKMAG00000013704	rbm12b	97	51.442	ENSCSEG00000004610	rbm12b	97	51.598	Cynoglossus_semilaevis
ENSKMAG00000013704	rbm12b	97	59.062	ENSCVAG00000011047	rbm12b	100	59.062	Cyprinodon_variegatus
ENSKMAG00000013704	rbm12b	96	40.278	ENSDARG00000079717	rbm12b	84	65.476	Danio_rerio
ENSKMAG00000013704	rbm12b	83	47.368	ENSDNOG00000041608	RBM12B	56	47.368	Dasypus_novemcinctus
ENSKMAG00000013704	rbm12b	96	39.157	ENSDORG00000024034	-	69	39.442	Dipodomys_ordii
ENSKMAG00000013704	rbm12b	74	38.507	ENSETEG00000013005	-	67	38.067	Echinops_telfairi
ENSKMAG00000013704	rbm12b	83	47.368	ENSEASG00005016297	RBM12B	64	47.368	Equus_asinus_asinus
ENSKMAG00000013704	rbm12b	83	47.368	ENSECAG00000017870	RBM12B	57	47.368	Equus_caballus
ENSKMAG00000013704	rbm12b	83	48.684	ENSFCAG00000029274	RBM12B	65	48.684	Felis_catus
ENSKMAG00000013704	rbm12b	96	35.675	ENSFALG00000014893	RBM12B	99	35.880	Ficedula_albicollis
ENSKMAG00000013704	rbm12b	89	48.684	ENSFDAG00000005576	RBM12B	60	48.684	Fukomys_damarensis
ENSKMAG00000013704	rbm12b	97	59.034	ENSFHEG00000016425	rbm12b	100	59.034	Fundulus_heteroclitus
ENSKMAG00000013704	rbm12b	96	50.866	ENSGMOG00000013467	rbm12b	100	50.866	Gadus_morhua
ENSKMAG00000013704	rbm12b	96	36.842	ENSGALG00000035129	RBM12B	99	37.027	Gallus_gallus
ENSKMAG00000013704	rbm12b	97	62.794	ENSGAFG00000007224	rbm12b	100	62.794	Gambusia_affinis
ENSKMAG00000013704	rbm12b	97	57.321	ENSGACG00000008682	rbm12b	99	57.121	Gasterosteus_aculeatus
ENSKMAG00000013704	rbm12b	96	36.936	ENSGAGG00000009774	RBM12B	99	36.662	Gopherus_agassizii
ENSKMAG00000013704	rbm12b	83	46.053	ENSGGOG00000011909	RBM12B	64	46.053	Gorilla_gorilla
ENSKMAG00000013704	rbm12b	72	37.615	ENSHBUG00000016150	zgc:153215	82	42.857	Haplochromis_burtoni
ENSKMAG00000013704	rbm12b	97	58.779	ENSHBUG00000016227	rbm12b	100	58.779	Haplochromis_burtoni
ENSKMAG00000013704	rbm12b	83	48.684	ENSHGLG00000009063	RBM12B	59	48.684	Heterocephalus_glaber_female
ENSKMAG00000013704	rbm12b	83	48.684	ENSHGLG00100021324	RBM12B	59	48.684	Heterocephalus_glaber_male
ENSKMAG00000013704	rbm12b	96	50.000	ENSHCOG00000014952	rbm12b	99	49.922	Hippocampus_comes
ENSKMAG00000013704	rbm12b	97	41.979	ENSIPUG00000001167	RBM12B	98	41.431	Ictalurus_punctatus
ENSKMAG00000013704	rbm12b	72	52.500	ENSIPUG00000019731	zgc:153215	76	52.500	Ictalurus_punctatus
ENSKMAG00000013704	rbm12b	86	48.684	ENSSTOG00000027445	RBM12B	69	48.684	Ictidomys_tridecemlineatus
ENSKMAG00000013704	rbm12b	96	40.000	ENSJJAG00000004165	-	76	39.308	Jaculus_jaculus
ENSKMAG00000013704	rbm12b	96	37.482	ENSLACG00000007177	RBM12B	99	37.339	Latimeria_chalumnae
ENSKMAG00000013704	rbm12b	97	42.985	ENSLOCG00000018344	rbm12b	99	42.730	Lepisosteus_oculatus
ENSKMAG00000013704	rbm12b	85	42.529	ENSLAFG00000029949	RBM12B	70	42.529	Loxodonta_africana
ENSKMAG00000013704	rbm12b	83	47.368	ENSMFAG00000045430	RBM12B	65	47.368	Macaca_fascicularis
ENSKMAG00000013704	rbm12b	83	47.368	ENSMMUG00000005558	RBM12B	64	47.368	Macaca_mulatta
ENSKMAG00000013704	rbm12b	83	47.368	ENSMNEG00000041292	RBM12B	65	47.368	Macaca_nemestrina
ENSKMAG00000013704	rbm12b	83	47.368	ENSMLEG00000037288	RBM12B	64	47.368	Mandrillus_leucophaeus
ENSKMAG00000013704	rbm12b	97	59.091	ENSMAMG00000011998	rbm12b	100	59.091	Mastacembelus_armatus
ENSKMAG00000013704	rbm12b	99	57.143	ENSMZEG00005014845	rbm12b	99	58.452	Maylandia_zebra
ENSKMAG00000013704	rbm12b	97	60.849	ENSMZEG00005015005	rbm12b	100	60.849	Maylandia_zebra
ENSKMAG00000013704	rbm12b	71	39.114	ENSMGAG00000011985	RBM12B	98	39.114	Meleagris_gallopavo
ENSKMAG00000013704	rbm12b	83	50.000	ENSMAUG00000021752	-	67	50.000	Mesocricetus_auratus
ENSKMAG00000013704	rbm12b	83	47.368	ENSMICG00000036969	RBM12B	66	47.368	Microcebus_murinus
ENSKMAG00000013704	rbm12b	96	40.082	ENSMOCG00000005603	-	78	40.082	Microtus_ochrogaster
ENSKMAG00000013704	rbm12b	61	37.805	ENSMMOG00000003372	zgc:153215	99	37.805	Mola_mola
ENSKMAG00000013704	rbm12b	97	54.773	ENSMMOG00000002404	rbm12b	95	54.773	Mola_mola
ENSKMAG00000013704	rbm12b	88	46.053	ENSMODG00000007436	RBM12B	82	46.053	Monodelphis_domestica
ENSKMAG00000013704	rbm12b	72	32.025	ENSMALG00000001222	zgc:153215	99	32.025	Monopterus_albus
ENSKMAG00000013704	rbm12b	97	55.781	ENSMALG00000012059	rbm12b	100	55.781	Monopterus_albus
ENSKMAG00000013704	rbm12b	83	51.351	ENSMUSG00000046667	Rbm12b1	67	51.351	Mus_musculus
ENSKMAG00000013704	rbm12b	84	46.591	ENSMUSG00000052137	Rbm12b2	69	46.591	Mus_musculus
ENSKMAG00000013704	rbm12b	84	46.591	MGP_SPRETEiJ_G0026765	-	63	46.591	Mus_spretus
ENSKMAG00000013704	rbm12b	84	46.591	MGP_SPRETEiJ_G0026766	-	69	46.591	Mus_spretus
ENSKMAG00000013704	rbm12b	83	47.368	ENSMPUG00000018637	RBM12B	56	47.368	Mustela_putorius_furo
ENSKMAG00000013704	rbm12b	83	46.053	ENSMLUG00000002359	RBM12B	59	46.053	Myotis_lucifugus
ENSKMAG00000013704	rbm12b	83	46.053	ENSNGAG00000002801	-	61	46.053	Nannospalax_galili
ENSKMAG00000013704	rbm12b	97	62.107	ENSNBRG00000015057	rbm12b	100	62.107	Neolamprologus_brichardi
ENSKMAG00000013704	rbm12b	72	36.697	ENSNBRG00000013644	zgc:153215	82	41.667	Neolamprologus_brichardi
ENSKMAG00000013704	rbm12b	87	47.368	ENSNLEG00000032050	RBM12B	63	47.368	Nomascus_leucogenys
ENSKMAG00000013704	rbm12b	86	48.684	ENSODEG00000019204	RBM12B	59	48.684	Octodon_degus
ENSKMAG00000013704	rbm12b	97	62.480	ENSONIG00000020612	rbm12b	100	62.480	Oreochromis_niloticus
ENSKMAG00000013704	rbm12b	97	36.662	ENSOANG00000015735	-	97	36.638	Ornithorhynchus_anatinus
ENSKMAG00000013704	rbm12b	85	44.828	ENSOCUG00000010353	RBM12B	66	44.828	Oryctolagus_cuniculus
ENSKMAG00000013704	rbm12b	97	57.788	ENSORLG00000008228	rbm12b	98	57.788	Oryzias_latipes
ENSKMAG00000013704	rbm12b	97	58.100	ENSORLG00020013619	rbm12b	98	58.100	Oryzias_latipes_hni
ENSKMAG00000013704	rbm12b	97	57.944	ENSORLG00015019999	rbm12b	98	57.944	Oryzias_latipes_hsok
ENSKMAG00000013704	rbm12b	71	31.197	ENSOMEG00000004220	zgc:153215	96	31.144	Oryzias_melastigma
ENSKMAG00000013704	rbm12b	97	57.944	ENSOMEG00000022523	rbm12b	98	57.944	Oryzias_melastigma
ENSKMAG00000013704	rbm12b	83	47.368	ENSOGAG00000002979	RBM12B	57	47.368	Otolemur_garnettii
ENSKMAG00000013704	rbm12b	83	48.684	ENSPTIG00000020071	RBM12B	65	48.684	Panthera_tigris_altaica
ENSKMAG00000013704	rbm12b	83	47.368	ENSPTRG00000020420	RBM12B	64	47.368	Pan_troglodytes
ENSKMAG00000013704	rbm12b	83	47.368	ENSPANG00000035535	RBM12B	64	47.368	Papio_anubis
ENSKMAG00000013704	rbm12b	97	43.815	ENSPKIG00000018719	rbm12b	99	43.964	Paramormyrops_kingsleyae
ENSKMAG00000013704	rbm12b	75	33.852	ENSPKIG00000014851	zgc:153215	99	33.268	Paramormyrops_kingsleyae
ENSKMAG00000013704	rbm12b	96	38.865	ENSPSIG00000001348	RBM12B	99	38.298	Pelodiscus_sinensis
ENSKMAG00000013704	rbm12b	96	39.264	ENSPEMG00000008279	-	77	39.468	Peromyscus_maniculatus_bairdii
ENSKMAG00000013704	rbm12b	88	46.053	ENSPCIG00000008556	RBM12B	83	46.053	Phascolarctos_cinereus
ENSKMAG00000013704	rbm12b	97	61.371	ENSPFOG00000020937	rbm12b	97	61.371	Poecilia_formosa
ENSKMAG00000013704	rbm12b	71	46.512	ENSPFOG00000017451	zgc:153215	66	46.512	Poecilia_formosa
ENSKMAG00000013704	rbm12b	97	61.695	ENSPLAG00000018782	rbm12b	100	61.695	Poecilia_latipinna
ENSKMAG00000013704	rbm12b	97	61.695	ENSPMEG00000011418	rbm12b	100	61.695	Poecilia_mexicana
ENSKMAG00000013704	rbm12b	97	62.480	ENSPREG00000020770	rbm12b	100	62.480	Poecilia_reticulata
ENSKMAG00000013704	rbm12b	83	47.368	ENSPPYG00000018745	RBM12B	56	47.368	Pongo_abelii
ENSKMAG00000013704	rbm12b	83	46.053	ENSPCOG00000023546	RBM12B	64	46.053	Propithecus_coquereli
ENSKMAG00000013704	rbm12b	83	47.368	ENSPVAG00000011803	RBM12B	61	47.368	Pteropus_vampyrus
ENSKMAG00000013704	rbm12b	97	61.321	ENSPNYG00000016696	rbm12b	100	61.321	Pundamilia_nyererei
ENSKMAG00000013704	rbm12b	99	41.203	ENSPNAG00000008126	rbm12b	97	41.691	Pygocentrus_nattereri
ENSKMAG00000013704	rbm12b	63	53.571	ENSPNAG00000025628	zgc:153215	75	53.571	Pygocentrus_nattereri
ENSKMAG00000013704	rbm12b	71	39.335	ENSRNOG00000055292	LOC679087	65	39.448	Rattus_norvegicus
ENSKMAG00000013704	rbm12b	83	52.000	ENSRNOG00000016330	Rbm12b	67	52.000	Rattus_norvegicus
ENSKMAG00000013704	rbm12b	83	47.368	ENSRBIG00000035046	RBM12B	64	47.368	Rhinopithecus_bieti
ENSKMAG00000013704	rbm12b	83	47.368	ENSRROG00000023660	RBM12B	67	47.368	Rhinopithecus_roxellana
ENSKMAG00000013704	rbm12b	83	47.368	ENSSBOG00000027592	RBM12B	64	47.368	Saimiri_boliviensis_boliviensis
ENSKMAG00000013704	rbm12b	88	46.053	ENSSHAG00000015335	RBM12B	83	46.053	Sarcophilus_harrisii
ENSKMAG00000013704	rbm12b	74	34.585	ENSSFOG00015009427	zgc:153215	99	33.925	Scleropages_formosus
ENSKMAG00000013704	rbm12b	97	44.298	ENSSFOG00015001584	rbm12b	99	44.640	Scleropages_formosus
ENSKMAG00000013704	rbm12b	97	57.075	ENSSMAG00000019708	rbm12b	100	57.075	Scophthalmus_maximus
ENSKMAG00000013704	rbm12b	72	30.680	ENSSMAG00000019013	zgc:153215	97	30.680	Scophthalmus_maximus
ENSKMAG00000013704	rbm12b	72	30.315	ENSSDUG00000012545	zgc:153215	99	30.315	Seriola_dumerili
ENSKMAG00000013704	rbm12b	97	60.398	ENSSDUG00000006856	rbm12b	100	60.398	Seriola_dumerili
ENSKMAG00000013704	rbm12b	63	50.000	ENSSLDG00000013581	zgc:153215	76	48.810	Seriola_lalandi_dorsalis
ENSKMAG00000013704	rbm12b	97	60.245	ENSSLDG00000016156	rbm12b	100	60.245	Seriola_lalandi_dorsalis
ENSKMAG00000013704	rbm12b	74	39.726	ENSSARG00000011845	-	68	39.726	Sorex_araneus
ENSKMAG00000013704	rbm12b	71	37.016	ENSSPUG00000016954	RBM12B	91	36.047	Sphenodon_punctatus
ENSKMAG00000013704	rbm12b	97	60.849	ENSSPAG00000006774	rbm12b	100	60.692	Stegastes_partitus
ENSKMAG00000013704	rbm12b	71	31.557	ENSSPAG00000023584	zgc:153215	98	32.196	Stegastes_partitus
ENSKMAG00000013704	rbm12b	83	45.946	ENSSSCG00000006110	RBM12B	57	45.946	Sus_scrofa
ENSKMAG00000013704	rbm12b	71	39.321	ENSTGUG00000011860	RBM12B	96	38.856	Taeniopygia_guttata
ENSKMAG00000013704	rbm12b	97	53.228	ENSTRUG00000013738	rbm12b	100	53.228	Takifugu_rubripes
ENSKMAG00000013704	rbm12b	53	31.218	ENSTNIG00000018374	-	99	30.964	Tetraodon_nigroviridis
ENSKMAG00000013704	rbm12b	71	39.364	ENSTBEG00000000449	RBM12B	63	39.078	Tupaia_belangeri
ENSKMAG00000013704	rbm12b	83	47.368	ENSUAMG00000023639	RBM12B	64	47.368	Ursus_americanus
ENSKMAG00000013704	rbm12b	83	47.368	ENSUMAG00000016008	RBM12B	61	47.368	Ursus_maritimus
ENSKMAG00000013704	rbm12b	83	47.368	ENSVVUG00000002694	RBM12B	64	47.368	Vulpes_vulpes
ENSKMAG00000013704	rbm12b	96	36.593	ENSXETG00000014694	rbm12b	100	39.203	Xenopus_tropicalis
ENSKMAG00000013704	rbm12b	71	30.097	ENSXCOG00000019654	zgc:153215	98	30.097	Xiphophorus_couchianus
ENSKMAG00000013704	rbm12b	64	59.211	ENSXCOG00000019735	-	99	59.211	Xiphophorus_couchianus
ENSKMAG00000013704	rbm12b	97	63.108	ENSXMAG00000014213	rbm12b	100	63.108	Xiphophorus_maculatus