EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSKMAG00000013911 (Gene tree)
Gene ID
108240799
Gene Symbol
RBMS1
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA-binding motif%2C single-stranded-interacting protein 1-like
Gene Type
protein_coding
Species
Kryptolebias_marmoratus
Status
putative
Strand
Minus strand
Length
14683 bases
Position
chrLWHD01000079.1:1215094-1229776
Accession
108240799
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSKMAP00000018732RRM_1PF00076.229.6e-3312
ENSKMAP00000018732RRM_1PF00076.229.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSKMAT00000018992RBMS1-2014098XM_017424568ENSKMAP00000018732394 (aa)XP_017280057UPI0007F87B9C
Gene Model
Click here to download ENSKMAG00000013911's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013911's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSKMAG00000013911RBMS18866.488ENSKMAG00000020500rbms38666.488
ENSKMAG00000013911RBMS18872.857ENSKMAG00000021167rbms2b8872.805
ENSKMAG00000013911RBMS17039.474ENSKMAG00000011999celf3a7639.474
ENSKMAG00000013911RBMS18968.684ENSKMAG00000012586-8276.490
ENSKMAG00000013911RBMS15742.105ENSKMAG00000003744celf5a5742.105
ENSKMAG00000013911RBMS15939.474ENSKMAG00000001269celf3b6339.474
ENSKMAG00000013911RBMS19964.359ENSKMAG00000011839-9963.846
ENSKMAG00000013911RBMS15138.961ENSKMAG00000019602celf46138.961
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSKMAG00000013911RBMS19478.457ENSG00000153250RBMS18393.396Homo_sapiens
ENSKMAG00000013911RBMS110089.141ENSAPOG00000024437-10087.879Acanthochromis_polyacanthus
ENSKMAG00000013911RBMS19966.667ENSAPOG00000013761rbms1a9966.154Acanthochromis_polyacanthus
ENSKMAG00000013911RBMS19476.842ENSAMEG00000012661RBMS19876.842Ailuropoda_melanoleuca
ENSKMAG00000013911RBMS19887.113ENSACIG00000021498RBMS19887.113Amphilophus_citrinellus
ENSKMAG00000013911RBMS19960.000ENSACIG00000000113rbms1a9960.000Amphilophus_citrinellus
ENSKMAG00000013911RBMS19966.667ENSAOCG00000010066rbms1a9966.154Amphiprion_ocellaris
ENSKMAG00000013911RBMS110089.873ENSAOCG00000014482-10089.873Amphiprion_ocellaris
ENSKMAG00000013911RBMS19966.667ENSAPEG00000023563rbms1a9966.154Amphiprion_percula
ENSKMAG00000013911RBMS110089.620ENSAPEG00000018371-10089.620Amphiprion_percula
ENSKMAG00000013911RBMS110084.304ENSATEG00000018573RBMS110084.051Anabas_testudineus
ENSKMAG00000013911RBMS19965.897ENSATEG00000015450rbms1a9965.385Anabas_testudineus
ENSKMAG00000013911RBMS19479.521ENSAPLG00000007282RBMS19479.521Anas_platyrhynchos
ENSKMAG00000013911RBMS19778.772ENSACAG00000011984RBMS18276.382Anolis_carolinensis
ENSKMAG00000013911RBMS18077.950ENSANAG00000024424RBMS110077.950Aotus_nancymaae
ENSKMAG00000013911RBMS110086.329ENSACLG00000013048RBMS110086.329Astatotilapia_calliptera
ENSKMAG00000013911RBMS19965.641ENSACLG00000021512rbms1a9965.641Astatotilapia_calliptera
ENSKMAG00000013911RBMS110080.000ENSAMXG00000009969RBMS110079.747Astyanax_mexicanus
ENSKMAG00000013911RBMS110073.232ENSAMXG00000002146rbms1a9971.970Astyanax_mexicanus
ENSKMAG00000013911RBMS19778.149ENSBTAG00000005180RBMS110076.296Bos_taurus
ENSKMAG00000013911RBMS19478.457ENSCJAG00000014861-9577.926Callithrix_jacchus
ENSKMAG00000013911RBMS19770.876ENSCJAG00000022465-9972.680Callithrix_jacchus
ENSKMAG00000013911RBMS19775.258ENSCJAG00000012871-9975.532Callithrix_jacchus
ENSKMAG00000013911RBMS19778.149ENSCAFG00000009922RBMS19678.149Canis_familiaris
ENSKMAG00000013911RBMS19477.926ENSCAFG00020006120RBMS110072.922Canis_lupus_dingo
ENSKMAG00000013911RBMS19477.926ENSCHIG00000023380RBMS19377.926Capra_hircus
ENSKMAG00000013911RBMS19478.457ENSTSYG00000005584RBMS19478.125Carlito_syrichta
ENSKMAG00000013911RBMS19478.191ENSCPOG00000012310RBMS19974.490Cavia_porcellus
ENSKMAG00000013911RBMS19478.457ENSCCAG00000033841RBMS19778.457Cebus_capucinus
ENSKMAG00000013911RBMS19776.943ENSCATG00000043032RBMS110076.943Cercocebus_atys
ENSKMAG00000013911RBMS19478.457ENSCLAG00000003031RBMS19478.457Chinchilla_lanigera
ENSKMAG00000013911RBMS19478.457ENSCSAG00000015687RBMS19378.457Chlorocebus_sabaeus
ENSKMAG00000013911RBMS110078.412ENSCPBG00000026455RBMS110078.412Chrysemys_picta_bellii
ENSKMAG00000013911RBMS19776.943ENSCANG00000042152RBMS110076.943Colobus_angolensis_palliatus
ENSKMAG00000013911RBMS19477.394ENSCGRG00001022833Rbms19377.394Cricetulus_griseus_chok1gshd
ENSKMAG00000013911RBMS19477.394ENSCGRG00000008824Rbms19974.235Cricetulus_griseus_crigri
ENSKMAG00000013911RBMS110084.131ENSCSEG00000010652RBMS110082.368Cynoglossus_semilaevis
ENSKMAG00000013911RBMS19965.128ENSCSEG00000000889rbms1a9964.615Cynoglossus_semilaevis
ENSKMAG00000013911RBMS110086.329ENSCVAG00000002027RBMS110086.076Cyprinodon_variegatus
ENSKMAG00000013911RBMS19966.154ENSCVAG00000014698rbms1a9965.641Cyprinodon_variegatus
ENSKMAG00000013911RBMS110073.367ENSDARG00000074023rbms1a9972.111Danio_rerio
ENSKMAG00000013911RBMS18875.272ENSDNOG00000040691RBMS19575.272Dasypus_novemcinctus
ENSKMAG00000013911RBMS19876.982ENSDORG00000007103Rbms19876.982Dipodomys_ordii
ENSKMAG00000013911RBMS19469.149ENSETEG00000012135RBMS19969.149Echinops_telfairi
ENSKMAG00000013911RBMS19778.149ENSEASG00005023132RBMS110076.296Equus_asinus_asinus
ENSKMAG00000013911RBMS19478.457ENSECAG00000019894RBMS110072.922Equus_caballus
ENSKMAG00000013911RBMS17384.932ENSEEUG00000005628RBMS17284.932Erinaceus_europaeus
ENSKMAG00000013911RBMS19674.142ENSELUG00000019328RBMS19474.142Esox_lucius
ENSKMAG00000013911RBMS110065.657ENSELUG00000018923rbms1a10066.162Esox_lucius
ENSKMAG00000013911RBMS19478.191ENSFCAG00000012524RBMS19477.841Felis_catus
ENSKMAG00000013911RBMS18879.545ENSFALG00000004440RBMS19479.545Ficedula_albicollis
ENSKMAG00000013911RBMS19777.436ENSFDAG00000015692RBMS19975.000Fukomys_damarensis
ENSKMAG00000013911RBMS110086.329ENSFHEG00000000720RBMS110086.835Fundulus_heteroclitus
ENSKMAG00000013911RBMS19965.641ENSFHEG00000005662rbms1a9771.569Fundulus_heteroclitus
ENSKMAG00000013911RBMS18866.295ENSGMOG00000000525rbms1a10066.295Gadus_morhua
ENSKMAG00000013911RBMS19778.920ENSGALG00000011132RBMS19678.920Gallus_gallus
ENSKMAG00000013911RBMS19263.562ENSGAFG00000011633rbms1a9568.222Gambusia_affinis
ENSKMAG00000013911RBMS110085.823ENSGAFG00000007708RBMS110087.848Gambusia_affinis
ENSKMAG00000013911RBMS19164.096ENSGACG00000015174rbms1a9068.847Gasterosteus_aculeatus
ENSKMAG00000013911RBMS110084.557ENSGACG00000005671RBMS110084.810Gasterosteus_aculeatus
ENSKMAG00000013911RBMS110078.412ENSGAGG00000007866RBMS110078.412Gopherus_agassizii
ENSKMAG00000013911RBMS19776.804ENSGGOG00000043756-9676.804Gorilla_gorilla
ENSKMAG00000013911RBMS19478.457ENSGGOG00000001264RBMS19778.457Gorilla_gorilla
ENSKMAG00000013911RBMS19965.641ENSHBUG00000004802rbms1a9965.641Haplochromis_burtoni
ENSKMAG00000013911RBMS19487.097ENSHBUG00000004516RBMS19887.097Haplochromis_burtoni
ENSKMAG00000013911RBMS19578.364ENSHGLG00000010387RBMS19974.684Heterocephalus_glaber_female
ENSKMAG00000013911RBMS19578.364ENSHGLG00100014105RBMS19974.684Heterocephalus_glaber_male
ENSKMAG00000013911RBMS19966.410ENSHCOG00000020097rbms1a9965.897Hippocampus_comes
ENSKMAG00000013911RBMS110083.544ENSHCOG00000016668RBMS110083.544Hippocampus_comes
ENSKMAG00000013911RBMS110081.980ENSIPUG00000014677RBMS110081.980Ictalurus_punctatus
ENSKMAG00000013911RBMS110072.727ENSIPUG00000010131RBMS19971.465Ictalurus_punctatus
ENSKMAG00000013911RBMS19478.989ENSSTOG00000012501RBMS19975.255Ictidomys_tridecemlineatus
ENSKMAG00000013911RBMS19477.660ENSJJAG00000016543Rbms19377.660Jaculus_jaculus
ENSKMAG00000013911RBMS110087.595ENSLBEG00000005787RBMS110087.595Labrus_bergylta
ENSKMAG00000013911RBMS19966.154ENSLBEG00000025962rbms1a9965.641Labrus_bergylta
ENSKMAG00000013911RBMS110077.419ENSLACG00000004324RBMS19977.419Latimeria_chalumnae
ENSKMAG00000013911RBMS110081.519ENSLOCG00000008622rbms1a10081.519Lepisosteus_oculatus
ENSKMAG00000013911RBMS19477.128ENSLAFG00000017217RBMS19877.128Loxodonta_africana
ENSKMAG00000013911RBMS19478.457ENSMFAG00000000274RBMS19878.457Macaca_fascicularis
ENSKMAG00000013911RBMS19478.457ENSMMUG00000016825RBMS19878.457Macaca_mulatta
ENSKMAG00000013911RBMS19478.457ENSMNEG00000039425RBMS19878.457Macaca_nemestrina
ENSKMAG00000013911RBMS19776.684ENSMLEG00000031517RBMS110076.684Mandrillus_leucophaeus
ENSKMAG00000013911RBMS19964.103ENSMAMG00000005018rbms1a9963.590Mastacembelus_armatus
ENSKMAG00000013911RBMS110083.544ENSMAMG00000003159-10083.797Mastacembelus_armatus
ENSKMAG00000013911RBMS19965.641ENSMZEG00005005661rbms1a9965.641Maylandia_zebra
ENSKMAG00000013911RBMS18286.810ENSMZEG00005007313RBMS19186.810Maylandia_zebra
ENSKMAG00000013911RBMS18880.114ENSMGAG00000011054RBMS110079.331Meleagris_gallopavo
ENSKMAG00000013911RBMS19477.394ENSMAUG00000008550Rbms19377.394Mesocricetus_auratus
ENSKMAG00000013911RBMS19478.457ENSMICG00000008325RBMS19878.457Microcebus_murinus
ENSKMAG00000013911RBMS19477.394ENSMOCG00000022617Rbms19377.394Microtus_ochrogaster
ENSKMAG00000013911RBMS110087.089ENSMMOG00000003707RBMS110087.089Mola_mola
ENSKMAG00000013911RBMS19962.051ENSMMOG00000018249rbms1a9961.538Mola_mola
ENSKMAG00000013911RBMS19478.989ENSMODG00000005250RBMS19378.989Monodelphis_domestica
ENSKMAG00000013911RBMS19683.727ENSMALG00000015715-10084.810Monopterus_albus
ENSKMAG00000013911RBMS19965.897ENSMALG00000014235rbms1a9965.385Monopterus_albus
ENSKMAG00000013911RBMS19477.660MGP_CAROLIEiJ_G0023586Rbms19377.660Mus_caroli
ENSKMAG00000013911RBMS19478.191ENSMUSG00000026970Rbms19378.191Mus_musculus
ENSKMAG00000013911RBMS19777.121MGP_PahariEiJ_G0025037Rbms19677.121Mus_pahari
ENSKMAG00000013911RBMS19774.568MGP_SPRETEiJ_G0024508Rbms18787.719Mus_spretus
ENSKMAG00000013911RBMS19475.000ENSMPUG00000000539RBMS19375.000Mustela_putorius_furo
ENSKMAG00000013911RBMS19474.365ENSMLUG00000008762RBMS19474.365Myotis_lucifugus
ENSKMAG00000013911RBMS19477.926ENSNGAG00000013636Rbms19377.926Nannospalax_galili
ENSKMAG00000013911RBMS19961.026ENSNBRG00000020217rbms1a9961.026Neolamprologus_brichardi
ENSKMAG00000013911RBMS18882.759ENSNBRG00000015151RBMS19482.759Neolamprologus_brichardi
ENSKMAG00000013911RBMS19478.457ENSNLEG00000001667RBMS19678.457Nomascus_leucogenys
ENSKMAG00000013911RBMS18067.391ENSMEUG00000000746RBMS110067.391Notamacropus_eugenii
ENSKMAG00000013911RBMS19471.809ENSOPRG00000012431RBMS19371.809Ochotona_princeps
ENSKMAG00000013911RBMS19477.926ENSODEG00000013934RBMS19377.926Octodon_degus
ENSKMAG00000013911RBMS110087.089ENSONIG00000008934RBMS110087.089Oreochromis_niloticus
ENSKMAG00000013911RBMS19965.729ENSONIG00000003329rbms1a9965.729Oreochromis_niloticus
ENSKMAG00000013911RBMS15453.909ENSOANG00000004477-9954.508Ornithorhynchus_anatinus
ENSKMAG00000013911RBMS19678.796ENSOANG00000006166RBMS19678.796Ornithorhynchus_anatinus
ENSKMAG00000013911RBMS19477.926ENSOCUG00000017365RBMS18877.926Oryctolagus_cuniculus
ENSKMAG00000013911RBMS110081.061ENSORLG00000016818RBMS19982.323Oryzias_latipes
ENSKMAG00000013911RBMS19962.660ENSORLG00000003917rbms1a9962.148Oryzias_latipes
ENSKMAG00000013911RBMS110081.061ENSORLG00020022335RBMS19982.323Oryzias_latipes_hni
ENSKMAG00000013911RBMS19962.051ENSORLG00020018663rbms1a9961.538Oryzias_latipes_hni
ENSKMAG00000013911RBMS110081.061ENSORLG00015018208RBMS19982.323Oryzias_latipes_hsok
ENSKMAG00000013911RBMS19962.308ENSORLG00015016556rbms1a9961.795Oryzias_latipes_hsok
ENSKMAG00000013911RBMS110082.278ENSOMEG00000002394RBMS19984.304Oryzias_melastigma
ENSKMAG00000013911RBMS18877.966ENSOGAG00000002900RBMS19477.966Otolemur_garnettii
ENSKMAG00000013911RBMS19477.926ENSOARG00000006870RBMS19377.926Ovis_aries
ENSKMAG00000013911RBMS19475.798ENSPPAG00000036520-9975.798Pan_paniscus
ENSKMAG00000013911RBMS19478.457ENSPPAG00000040083RBMS19878.457Pan_paniscus
ENSKMAG00000013911RBMS19478.191ENSPPRG00000005040RBMS19477.841Panthera_pardus
ENSKMAG00000013911RBMS19478.191ENSPTIG00000021240RBMS19477.841Panthera_tigris_altaica
ENSKMAG00000013911RBMS19476.330ENSPTRG00000039358-9776.330Pan_troglodytes
ENSKMAG00000013911RBMS19478.457ENSPTRG00000052304RBMS19878.457Pan_troglodytes
ENSKMAG00000013911RBMS19478.457ENSPANG00000001383RBMS19878.457Papio_anubis
ENSKMAG00000013911RBMS110079.597ENSPKIG00000001498rbms1a10078.589Paramormyrops_kingsleyae
ENSKMAG00000013911RBMS110075.696ENSPKIG00000012818rbms1a10075.443Paramormyrops_kingsleyae
ENSKMAG00000013911RBMS19579.003ENSPSIG00000010240RBMS19578.238Pelodiscus_sinensis
ENSKMAG00000013911RBMS19962.051ENSPMGG00000004341rbms1a9962.051Periophthalmus_magnuspinnatus
ENSKMAG00000013911RBMS18583.036ENSPMGG00000006310RBMS19677.364Periophthalmus_magnuspinnatus
ENSKMAG00000013911RBMS19478.191ENSPEMG00000009449Rbms19578.191Peromyscus_maniculatus_bairdii
ENSKMAG00000013911RBMS110076.790ENSPCIG00000018405RBMS110076.790Phascolarctos_cinereus
ENSKMAG00000013911RBMS110088.608ENSPFOG00000017483RBMS110088.608Poecilia_formosa
ENSKMAG00000013911RBMS19965.897ENSPFOG00000016116rbms1a9965.385Poecilia_formosa
ENSKMAG00000013911RBMS110086.329ENSPLAG00000000920RBMS110088.354Poecilia_latipinna
ENSKMAG00000013911RBMS19965.897ENSPLAG00000013864rbms1a9965.385Poecilia_latipinna
ENSKMAG00000013911RBMS110088.608ENSPMEG00000015838RBMS110088.608Poecilia_mexicana
ENSKMAG00000013911RBMS19965.897ENSPMEG00000016185rbms1a9965.385Poecilia_mexicana
ENSKMAG00000013911RBMS110088.354ENSPREG00000008146RBMS110088.354Poecilia_reticulata
ENSKMAG00000013911RBMS19965.897ENSPREG00000020161rbms1a9965.385Poecilia_reticulata
ENSKMAG00000013911RBMS19475.000ENSPPYG00000012879-9375.000Pongo_abelii
ENSKMAG00000013911RBMS19472.872ENSPCAG00000009673RBMS19372.872Procavia_capensis
ENSKMAG00000013911RBMS19478.457ENSPCOG00000027294RBMS19478.125Propithecus_coquereli
ENSKMAG00000013911RBMS19468.085ENSPVAG00000010429RBMS19368.085Pteropus_vampyrus
ENSKMAG00000013911RBMS110086.835ENSPNYG00000002643RBMS110086.835Pundamilia_nyererei
ENSKMAG00000013911RBMS110080.759ENSPNAG00000023479RBMS110080.506Pygocentrus_nattereri
ENSKMAG00000013911RBMS18873.276ENSPNAG00000010225rbms1a8873.276Pygocentrus_nattereri
ENSKMAG00000013911RBMS19378.226ENSRNOG00000008482Rbms19972.973Rattus_norvegicus
ENSKMAG00000013911RBMS19776.486ENSRBIG00000044262RBMS110076.486Rhinopithecus_bieti
ENSKMAG00000013911RBMS19776.943ENSRROG00000043108RBMS110076.943Rhinopithecus_roxellana
ENSKMAG00000013911RBMS19476.702ENSSBOG00000034705RBMS19876.702Saimiri_boliviensis_boliviensis
ENSKMAG00000013911RBMS19478.989ENSSHAG00000012271RBMS110074.493Sarcophilus_harrisii
ENSKMAG00000013911RBMS110080.759ENSSFOG00015022929rbms110080.759Scleropages_formosus
ENSKMAG00000013911RBMS18877.522ENSSFOG00015014493rbms1a9577.299Scleropages_formosus
ENSKMAG00000013911RBMS110085.823ENSSMAG00000012152RBMS19685.570Scophthalmus_maximus
ENSKMAG00000013911RBMS18768.222ENSSMAG00000012722rbms1a9568.222Scophthalmus_maximus
ENSKMAG00000013911RBMS19966.410ENSSDUG00000020602rbms1a9965.897Seriola_dumerili
ENSKMAG00000013911RBMS110088.354ENSSDUG00000018803RBMS110088.354Seriola_dumerili
ENSKMAG00000013911RBMS110088.608ENSSLDG00000016556RBMS110088.608Seriola_lalandi_dorsalis
ENSKMAG00000013911RBMS19966.410ENSSLDG00000009495rbms1a9965.897Seriola_lalandi_dorsalis
ENSKMAG00000013911RBMS18260.802ENSSARG00000011085RBMS18060.802Sorex_araneus
ENSKMAG00000013911RBMS18880.114ENSSPUG00000017163RBMS19480.114Sphenodon_punctatus
ENSKMAG00000013911RBMS110090.609ENSSPAG00000000059RBMS110090.609Stegastes_partitus
ENSKMAG00000013911RBMS19966.410ENSSPAG00000005371rbms1a9965.897Stegastes_partitus
ENSKMAG00000013911RBMS19775.835ENSSSCG00000015888RBMS110075.556Sus_scrofa
ENSKMAG00000013911RBMS19479.255ENSTGUG00000006606RBMS19379.255Taeniopygia_guttata
ENSKMAG00000013911RBMS110079.597ENSTRUG00000005466-10080.856Takifugu_rubripes
ENSKMAG00000013911RBMS19963.868ENSTRUG00000017155rbms1a9963.359Takifugu_rubripes
ENSKMAG00000013911RBMS19064.326ENSTNIG00000009477rbms1a9963.580Tetraodon_nigroviridis
ENSKMAG00000013911RBMS19483.065ENSTNIG00000016496RBMS19785.632Tetraodon_nigroviridis
ENSKMAG00000013911RBMS19470.213ENSTBEG00000016156RBMS19970.213Tupaia_belangeri
ENSKMAG00000013911RBMS19478.457ENSTTRG00000011058RBMS19978.457Tursiops_truncatus
ENSKMAG00000013911RBMS19477.660ENSUAMG00000022331RBMS19377.660Ursus_americanus
ENSKMAG00000013911RBMS19477.660ENSUMAG00000008605RBMS19777.660Ursus_maritimus
ENSKMAG00000013911RBMS18881.197ENSVPAG00000002716RBMS19381.197Vicugna_pacos
ENSKMAG00000013911RBMS19474.745ENSVVUG00000018682RBMS19478.125Vulpes_vulpes
ENSKMAG00000013911RBMS19671.615ENSXETG00000016204rbms110071.354Xenopus_tropicalis
ENSKMAG00000013911RBMS19962.821ENSXCOG00000001659rbms1a9962.308Xiphophorus_couchianus
ENSKMAG00000013911RBMS18887.679ENSXCOG00000000211RBMS19587.679Xiphophorus_couchianus
ENSKMAG00000013911RBMS19965.641ENSXMAG00000001802rbms1a9965.128Xiphophorus_maculatus
ENSKMAG00000013911RBMS110087.342ENSXMAG00000011405RBMS110087.342Xiphophorus_maculatus

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