EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000013949 (Gene tree)
Gene ID: 108241313
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 21-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2485 bases
Position: chrLWHD01000084.1:2018263-2020747
Accession: 108241313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000018754	zf-C2H2	PF00096.26	3.9e-18	1	4
ENSKMAP00000018754	zf-C2H2	PF00096.26	3.9e-18	2	4
ENSKMAP00000018754	zf-C2H2	PF00096.26	3.9e-18	3	4
ENSKMAP00000018754	zf-C2H2	PF00096.26	3.9e-18	4	4
ENSKMAP00000018754	zf-met	PF12874.7	9.1e-10	1	3
ENSKMAP00000018754	zf-met	PF12874.7	9.1e-10	2	3
ENSKMAP00000018754	zf-met	PF12874.7	9.1e-10	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000019014	-	1648	XM_017425349	ENSKMAP00000018754	495 (aa)	XP_017280838	UPI0007F8A327

Gene Model

Click here to download ENSKMAG00000013949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000013949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000013949	-	66	39.855	ENSKMAG00000000073	-	74	36.207
ENSKMAG00000013949	-	51	31.148	ENSKMAG00000011441	-	81	31.148
ENSKMAG00000013949	-	58	36.905	ENSKMAG00000006392	-	58	38.333
ENSKMAG00000013949	-	52	49.367	ENSKMAG00000003940	-	85	49.367
ENSKMAG00000013949	-	52	34.043	ENSKMAG00000004732	zbtb41	51	34.043
ENSKMAG00000013949	-	50	43.820	ENSKMAG00000000668	-	84	43.820
ENSKMAG00000013949	-	52	41.781	ENSKMAG00000000597	-	94	42.045
ENSKMAG00000013949	-	57	38.129	ENSKMAG00000006450	-	84	36.585
ENSKMAG00000013949	-	54	42.727	ENSKMAG00000009979	-	61	50.476
ENSKMAG00000013949	-	51	40.000	ENSKMAG00000008262	-	66	40.000
ENSKMAG00000013949	-	50	39.286	ENSKMAG00000005747	-	91	42.667
ENSKMAG00000013949	-	58	38.125	ENSKMAG00000018648	-	75	45.833
ENSKMAG00000013949	-	53	34.965	ENSKMAG00000008319	-	82	34.965
ENSKMAG00000013949	-	52	48.864	ENSKMAG00000019130	-	84	48.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000013949	-	51	41.447	ENSAPEG00000013550	-	97	51.111	Amphiprion_percula
ENSKMAG00000013949	-	51	37.086	ENSEBUG00000006233	-	63	37.086	Eptatretus_burgeri
ENSKMAG00000013949	-	52	55.556	ENSFHEG00000021003	-	80	55.556	Fundulus_heteroclitus
ENSKMAG00000013949	-	53	40.000	ENSFHEG00000013803	-	70	40.741	Fundulus_heteroclitus
ENSKMAG00000013949	-	51	41.216	ENSFHEG00000003405	-	60	41.216	Fundulus_heteroclitus
ENSKMAG00000013949	-	50	40.708	ENSGAFG00000012733	-	55	40.708	Gambusia_affinis
ENSKMAG00000013949	-	52	41.216	ENSHCOG00000020972	-	93	46.269	Hippocampus_comes
ENSKMAG00000013949	-	53	37.888	ENSORLG00000030630	-	89	37.888	Oryzias_latipes
ENSKMAG00000013949	-	51	39.259	ENSORLG00000028323	-	89	46.575	Oryzias_latipes
ENSKMAG00000013949	-	53	39.370	ENSORLG00000027186	-	89	36.806	Oryzias_latipes
ENSKMAG00000013949	-	50	43.878	ENSORLG00000024399	-	87	35.220	Oryzias_latipes
ENSKMAG00000013949	-	57	34.694	ENSORLG00000029027	-	94	37.267	Oryzias_latipes
ENSKMAG00000013949	-	53	37.888	ENSORLG00000026852	-	76	38.710	Oryzias_latipes
ENSKMAG00000013949	-	51	40.196	ENSORLG00000025717	-	83	40.196	Oryzias_latipes
ENSKMAG00000013949	-	51	37.143	ENSORLG00000026811	-	65	38.400	Oryzias_latipes
ENSKMAG00000013949	-	62	51.634	ENSORLG00020001791	-	96	51.634	Oryzias_latipes_hni
ENSKMAG00000013949	-	51	38.065	ENSORLG00020010560	-	98	43.269	Oryzias_latipes_hni
ENSKMAG00000013949	-	52	37.838	ENSORLG00020009943	-	93	38.211	Oryzias_latipes_hni
ENSKMAG00000013949	-	51	34.459	ENSORLG00020008891	-	83	45.833	Oryzias_latipes_hni
ENSKMAG00000013949	-	56	42.000	ENSORLG00015012892	-	90	42.000	Oryzias_latipes_hsok
ENSKMAG00000013949	-	53	42.708	ENSORLG00015011730	-	96	41.667	Oryzias_latipes_hsok
ENSKMAG00000013949	-	51	40.580	ENSORLG00015012776	-	97	47.297	Oryzias_latipes_hsok
ENSKMAG00000013949	-	51	37.069	ENSOMEG00000009568	-	97	39.855	Oryzias_melastigma
ENSKMAG00000013949	-	51	44.330	ENSOMEG00000008449	-	98	39.241	Oryzias_melastigma
ENSKMAG00000013949	-	50	39.189	ENSOMEG00000019179	-	96	43.077	Oryzias_melastigma
ENSKMAG00000013949	-	53	37.654	ENSOMEG00000011566	-	88	46.154	Oryzias_melastigma
ENSKMAG00000013949	-	52	36.667	ENSOMEG00000016295	-	71	36.667	Oryzias_melastigma
ENSKMAG00000013949	-	50	36.306	ENSOMEG00000006511	-	67	36.842	Oryzias_melastigma
ENSKMAG00000013949	-	52	36.913	ENSOMEG00000016747	-	73	39.773	Oryzias_melastigma
ENSKMAG00000013949	-	57	44.118	ENSOMEG00000019519	-	87	44.565	Oryzias_melastigma
ENSKMAG00000013949	-	50	35.625	ENSOMEG00000020870	-	91	40.789	Oryzias_melastigma
ENSKMAG00000013949	-	54	43.243	ENSPFOG00000001053	-	99	44.444	Poecilia_formosa
ENSKMAG00000013949	-	53	39.189	ENSPLAG00000008529	-	99	39.815	Poecilia_latipinna
ENSKMAG00000013949	-	55	36.806	ENSPMEG00000020833	-	74	47.436	Poecilia_mexicana
ENSKMAG00000013949	-	60	37.374	ENSPREG00000013780	-	92	40.659	Poecilia_reticulata
ENSKMAG00000013949	-	52	37.815	ENSXCOG00000006951	-	71	44.578	Xiphophorus_couchianus
ENSKMAG00000013949	-	50	46.032	ENSXCOG00000003530	-	90	46.032	Xiphophorus_couchianus
ENSKMAG00000013949	-	72	44.355	ENSXMAG00000028978	-	74	41.135	Xiphophorus_maculatus