EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000014091 (Gene tree)
Gene ID: 108245985
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: uncharacterized LOC108245985
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8086 bases
Position: chrLWHD01000193.1:714514-722599
Accession: 108245985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	1	6
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	2	6
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	3	6
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	4	6
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	5	6
ENSKMAP00000018949	zf-C2H2	PF00096.26	1.9e-49	6	6
ENSKMAP00000018949	zf-met	PF12874.7	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000019211	-	5715	XM_017433280	ENSKMAP00000018949	1297 (aa)	XP_017288769	UPI0007F8CB0B

Gene Model

Click here to download ENSKMAG00000014091's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000014091's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000014091	zgc:66448	50	44.379	ENSKMAG00000021716	-	81	44.379
ENSKMAG00000014091	zgc:66448	52	43.396	ENSKMAG00000003940	-	99	43.396
ENSKMAG00000014091	zgc:66448	52	41.711	ENSKMAG00000005747	-	91	43.787
ENSKMAG00000014091	zgc:66448	50	32.836	ENSKMAG00000000620	-	73	32.836
ENSKMAG00000014091	zgc:66448	53	39.423	ENSKMAG00000017329	znf710b	61	35.833
ENSKMAG00000014091	zgc:66448	53	34.737	ENSKMAG00000014923	-	69	34.737
ENSKMAG00000014091	zgc:66448	52	36.634	ENSKMAG00000008319	-	87	40.476
ENSKMAG00000014091	zgc:66448	51	37.107	ENSKMAG00000000529	-	79	37.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000014091	zgc:66448	53	36.723	ENSACIG00000006377	-	70	36.723	Amphilophus_citrinellus
ENSKMAG00000014091	zgc:66448	51	40.323	ENSAOCG00000022675	-	90	42.197	Amphiprion_ocellaris
ENSKMAG00000014091	zgc:66448	50	30.805	ENSAPEG00000016118	-	97	40.541	Amphiprion_percula
ENSKMAG00000014091	zgc:66448	54	34.768	ENSATEG00000018051	-	97	42.690	Anabas_testudineus
ENSKMAG00000014091	zgc:66448	71	44.865	ENSAMXG00000036663	zgc:66448	86	41.285	Astyanax_mexicanus
ENSKMAG00000014091	zgc:66448	100	70.281	ENSGAFG00000003391	zgc:66448	100	70.281	Gambusia_affinis
ENSKMAG00000014091	zgc:66448	72	44.663	ENSIPUG00000002548	zgc:66448	95	40.263	Ictalurus_punctatus
ENSKMAG00000014091	zgc:66448	52	31.515	ENSLBEG00000013570	-	93	43.293	Labrus_bergylta
ENSKMAG00000014091	zgc:66448	51	32.990	ENSMMOG00000004134	-	93	42.857	Mola_mola
ENSKMAG00000014091	zgc:66448	100	64.822	ENSORLG00015018781	zgc:66448	100	64.536	Oryzias_latipes_hsok
ENSKMAG00000014091	zgc:66448	100	64.372	ENSOMEG00000010575	zgc:66448	100	63.994	Oryzias_melastigma
ENSKMAG00000014091	zgc:66448	100	66.742	ENSSMAG00000001305	zgc:66448	100	66.966	Scophthalmus_maximus
ENSKMAG00000014091	zgc:66448	54	34.025	ENSSDUG00000009601	-	92	49.153	Seriola_dumerili
ENSKMAG00000014091	zgc:66448	100	69.470	ENSXMAG00000022364	zgc:66448	100	69.796	Xiphophorus_maculatus