EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000014494 (Gene tree)
Gene ID: 108250717
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 3074 bases
Position: chrLWHD01000680.1:44266-47339
Accession: 108250717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000019476	LSM	PF01423.22	7.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000019739	-	1144	XM_017440728	ENSKMAP00000019476	244 (aa)	XP_017296217	-

Gene Model

Click here to download ENSKMAG00000014494's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000014494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000014494	snrpb	68	95.238	ENSG00000125835	SNRPB	74	100.000	Homo_sapiens
ENSKMAG00000014494	snrpb	93	98.684	ENSAPOG00000019606	snrpb	78	98.684	Acanthochromis_polyacanthus
ENSKMAG00000014494	snrpb	68	95.210	ENSAMEG00000011353	SNRPB	71	94.186	Ailuropoda_melanoleuca
ENSKMAG00000014494	snrpb	92	98.214	ENSACIG00000014480	snrpb	99	98.214	Amphilophus_citrinellus
ENSKMAG00000014494	snrpb	93	98.684	ENSAOCG00000006876	snrpb	95	98.684	Amphiprion_ocellaris
ENSKMAG00000014494	snrpb	95	98.276	ENSAPEG00000021585	snrpb	99	98.276	Amphiprion_percula
ENSKMAG00000014494	snrpb	93	97.807	ENSATEG00000009836	snrpb	95	97.807	Anabas_testudineus
ENSKMAG00000014494	snrpb	65	96.250	ENSACAG00000002053	SNRPB	71	94.545	Anolis_carolinensis
ENSKMAG00000014494	snrpb	68	88.095	ENSANAG00000036271	-	70	86.127	Aotus_nancymaae
ENSKMAG00000014494	snrpb	68	95.238	ENSANAG00000024443	-	75	94.220	Aotus_nancymaae
ENSKMAG00000014494	snrpb	93	98.684	ENSACLG00000014707	snrpb	95	98.684	Astatotilapia_calliptera
ENSKMAG00000014494	snrpb	68	98.795	ENSAMXG00000029434	snrpb	72	98.824	Astyanax_mexicanus
ENSKMAG00000014494	snrpb	83	85.577	ENSBTAG00000001038	SNRPB	74	94.186	Bos_taurus
ENSKMAG00000014494	snrpb	68	95.238	ENSCJAG00000020971	-	75	94.220	Callithrix_jacchus
ENSKMAG00000014494	snrpb	87	83.796	ENSCJAG00000023097	-	72	87.209	Callithrix_jacchus
ENSKMAG00000014494	snrpb	59	84.932	ENSCAFG00000031109	-	72	82.759	Canis_familiaris
ENSKMAG00000014494	snrpb	68	95.238	ENSCAFG00000006693	-	75	94.220	Canis_familiaris
ENSKMAG00000014494	snrpb	68	95.238	ENSCAFG00020016981	-	72	94.220	Canis_lupus_dingo
ENSKMAG00000014494	snrpb	68	95.238	ENSCHIG00000025449	-	74	94.186	Capra_hircus
ENSKMAG00000014494	snrpb	72	73.864	ENSTSYG00000032303	-	62	72.515	Carlito_syrichta
ENSKMAG00000014494	snrpb	68	95.238	ENSTSYG00000014498	-	75	94.220	Carlito_syrichta
ENSKMAG00000014494	snrpb	68	95.210	ENSCAPG00000012669	SNRPB	75	94.186	Cavia_aperea
ENSKMAG00000014494	snrpb	68	95.238	ENSCPOG00000039408	SNRPB	75	94.220	Cavia_porcellus
ENSKMAG00000014494	snrpb	68	95.238	ENSCCAG00000026002	SNRPB	75	94.220	Cebus_capucinus
ENSKMAG00000014494	snrpb	52	84.252	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSKMAG00000014494	snrpb	68	95.238	ENSCATG00000030230	SNRPB	75	94.220	Cercocebus_atys
ENSKMAG00000014494	snrpb	68	95.238	ENSCLAG00000012442	SNRPB	73	94.220	Chinchilla_lanigera
ENSKMAG00000014494	snrpb	68	95.238	ENSCSAG00000010840	SNRPB	75	94.220	Chlorocebus_sabaeus
ENSKMAG00000014494	snrpb	68	97.024	ENSCPBG00000026801	SNRPB	75	95.376	Chrysemys_picta_bellii
ENSKMAG00000014494	snrpb	68	95.238	ENSCANG00000019461	SNRPB	75	94.220	Colobus_angolensis_palliatus
ENSKMAG00000014494	snrpb	68	95.238	ENSCGRG00001023046	Snrpb	75	94.220	Cricetulus_griseus_chok1gshd
ENSKMAG00000014494	snrpb	66	95.092	ENSCGRG00000010423	Snrpb	73	93.939	Cricetulus_griseus_crigri
ENSKMAG00000014494	snrpb	93	97.807	ENSCSEG00000020328	snrpb	95	97.807	Cynoglossus_semilaevis
ENSKMAG00000014494	snrpb	93	96.943	ENSDARG00000011125	snrpb	95	96.943	Danio_rerio
ENSKMAG00000014494	snrpb	68	95.238	ENSDNOG00000015545	-	72	94.220	Dasypus_novemcinctus
ENSKMAG00000014494	snrpb	68	89.286	ENSDNOG00000007896	-	71	88.439	Dasypus_novemcinctus
ENSKMAG00000014494	snrpb	66	95.062	ENSDORG00000029558	Snrpb	72	93.976	Dipodomys_ordii
ENSKMAG00000014494	snrpb	75	62.437	FBgn0262601	SmB	74	69.799	Drosophila_melanogaster
ENSKMAG00000014494	snrpb	68	74.405	ENSETEG00000006830	SNRPB	75	72.674	Echinops_telfairi
ENSKMAG00000014494	snrpb	72	81.921	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSKMAG00000014494	snrpb	68	94.643	ENSEASG00005012991	SNRPB	75	93.642	Equus_asinus_asinus
ENSKMAG00000014494	snrpb	68	95.238	ENSECAG00000011944	SNRPB	75	94.220	Equus_caballus
ENSKMAG00000014494	snrpb	68	95.238	ENSEEUG00000015568	SNRPB	61	94.220	Erinaceus_europaeus
ENSKMAG00000014494	snrpb	93	96.491	ENSELUG00000014564	snrpb	98	96.413	Esox_lucius
ENSKMAG00000014494	snrpb	68	95.238	ENSFCAG00000034090	-	75	94.220	Felis_catus
ENSKMAG00000014494	snrpb	65	96.875	ENSFALG00000004866	SNRPB	71	95.152	Ficedula_albicollis
ENSKMAG00000014494	snrpb	68	95.238	ENSFDAG00000009937	SNRPB	75	94.220	Fukomys_damarensis
ENSKMAG00000014494	snrpb	68	97.024	ENSGALG00000035421	SNRPN	72	95.376	Gallus_gallus
ENSKMAG00000014494	snrpb	93	98.673	ENSGAFG00000019558	snrpb	99	98.673	Gambusia_affinis
ENSKMAG00000014494	snrpb	93	96.930	ENSGACG00000003262	snrpb	95	96.930	Gasterosteus_aculeatus
ENSKMAG00000014494	snrpb	68	97.024	ENSGAGG00000001308	SNRPB	72	95.376	Gopherus_agassizii
ENSKMAG00000014494	snrpb	68	95.238	ENSGGOG00000016138	SNRPB	75	94.220	Gorilla_gorilla
ENSKMAG00000014494	snrpb	93	98.684	ENSHBUG00000008369	snrpb	95	98.684	Haplochromis_burtoni
ENSKMAG00000014494	snrpb	68	95.238	ENSHGLG00000016241	-	75	94.220	Heterocephalus_glaber_female
ENSKMAG00000014494	snrpb	61	86.667	ENSHGLG00000016505	-	82	82.456	Heterocephalus_glaber_female
ENSKMAG00000014494	snrpb	68	95.238	ENSHGLG00100012877	-	75	94.220	Heterocephalus_glaber_male
ENSKMAG00000014494	snrpb	61	86.667	ENSHGLG00100004178	-	82	82.456	Heterocephalus_glaber_male
ENSKMAG00000014494	snrpb	93	97.807	ENSHCOG00000014888	snrpb	95	97.807	Hippocampus_comes
ENSKMAG00000014494	snrpb	93	96.943	ENSIPUG00000024569	SNRPB	95	96.943	Ictalurus_punctatus
ENSKMAG00000014494	snrpb	77	76.596	ENSSTOG00000027821	-	62	95.588	Ictidomys_tridecemlineatus
ENSKMAG00000014494	snrpb	68	93.452	ENSSTOG00000033664	-	72	92.486	Ictidomys_tridecemlineatus
ENSKMAG00000014494	snrpb	68	95.238	ENSJJAG00000024170	Snrpb	75	94.220	Jaculus_jaculus
ENSKMAG00000014494	snrpb	94	97.380	ENSLBEG00000005678	snrpb	95	97.807	Labrus_bergylta
ENSKMAG00000014494	snrpb	74	93.989	ENSLACG00000011459	SNRPB	72	94.798	Latimeria_chalumnae
ENSKMAG00000014494	snrpb	93	97.380	ENSLOCG00000002687	snrpb	95	97.380	Lepisosteus_oculatus
ENSKMAG00000014494	snrpb	68	90.419	ENSLAFG00000017588	SNRPB	73	89.474	Loxodonta_africana
ENSKMAG00000014494	snrpb	68	95.238	ENSMFAG00000038756	SNRPB	75	94.220	Macaca_fascicularis
ENSKMAG00000014494	snrpb	68	95.238	ENSMMUG00000010050	SNRPB	75	94.220	Macaca_mulatta
ENSKMAG00000014494	snrpb	68	95.238	ENSMNEG00000027954	SNRPB	75	94.220	Macaca_nemestrina
ENSKMAG00000014494	snrpb	68	95.238	ENSMLEG00000022346	SNRPB	75	94.220	Mandrillus_leucophaeus
ENSKMAG00000014494	snrpb	93	98.678	ENSMAMG00000009294	snrpb	92	98.678	Mastacembelus_armatus
ENSKMAG00000014494	snrpb	93	98.684	ENSMZEG00005011856	snrpb	95	98.684	Maylandia_zebra
ENSKMAG00000014494	snrpb	73	83.978	ENSMICG00000015983	-	79	84.302	Microcebus_murinus
ENSKMAG00000014494	snrpb	68	95.238	ENSMICG00000016519	SNRPB	74	94.186	Microcebus_murinus
ENSKMAG00000014494	snrpb	57	79.137	ENSMOCG00000021362	-	72	75.439	Microtus_ochrogaster
ENSKMAG00000014494	snrpb	68	94.643	ENSMOCG00000002892	-	75	93.642	Microtus_ochrogaster
ENSKMAG00000014494	snrpb	95	97.835	ENSMMOG00000013226	snrpb	98	97.835	Mola_mola
ENSKMAG00000014494	snrpb	93	97.807	ENSMALG00000020839	snrpb	77	97.807	Monopterus_albus
ENSKMAG00000014494	snrpb	68	95.238	MGP_CAROLIEiJ_G0024293	Snrpb	74	100.000	Mus_caroli
ENSKMAG00000014494	snrpb	68	95.238	ENSMUSG00000027404	Snrpb	74	100.000	Mus_musculus
ENSKMAG00000014494	snrpb	68	95.238	MGP_PahariEiJ_G0025738	Snrpb	74	100.000	Mus_pahari
ENSKMAG00000014494	snrpb	68	95.238	MGP_SPRETEiJ_G0025213	Snrpb	73	100.000	Mus_spretus
ENSKMAG00000014494	snrpb	68	95.238	ENSMPUG00000009283	SNRPB	75	94.220	Mustela_putorius_furo
ENSKMAG00000014494	snrpb	68	91.667	ENSMLUG00000016951	SNRPB	71	90.698	Myotis_lucifugus
ENSKMAG00000014494	snrpb	68	95.238	ENSNGAG00000012051	Snrpb	75	94.220	Nannospalax_galili
ENSKMAG00000014494	snrpb	96	94.444	ENSNBRG00000006353	snrpb	83	97.685	Neolamprologus_brichardi
ENSKMAG00000014494	snrpb	68	95.238	ENSNLEG00000029067	SNRPB	73	94.186	Nomascus_leucogenys
ENSKMAG00000014494	snrpb	68	95.210	ENSMEUG00000015625	SNRPB	76	94.186	Notamacropus_eugenii
ENSKMAG00000014494	snrpb	68	89.881	ENSODEG00000016060	-	72	89.017	Octodon_degus
ENSKMAG00000014494	snrpb	68	95.238	ENSODEG00000004305	-	75	94.220	Octodon_degus
ENSKMAG00000014494	snrpb	93	98.684	ENSONIG00000000248	snrpb	95	98.684	Oreochromis_niloticus
ENSKMAG00000014494	snrpb	88	87.097	ENSOCUG00000021456	-	71	90.643	Oryctolagus_cuniculus
ENSKMAG00000014494	snrpb	68	92.857	ENSOCUG00000028215	-	72	91.860	Oryctolagus_cuniculus
ENSKMAG00000014494	snrpb	68	95.238	ENSOCUG00000014042	-	72	94.186	Oryctolagus_cuniculus
ENSKMAG00000014494	snrpb	74	87.978	ENSOCUG00000022423	-	88	89.474	Oryctolagus_cuniculus
ENSKMAG00000014494	snrpb	87	64.486	ENSOCUG00000026813	-	63	67.568	Oryctolagus_cuniculus
ENSKMAG00000014494	snrpb	93	98.684	ENSORLG00000021862	snrpb	95	98.684	Oryzias_latipes
ENSKMAG00000014494	snrpb	68	95.238	ENSOGAG00000016149	SNRPB	72	94.220	Otolemur_garnettii
ENSKMAG00000014494	snrpb	68	95.238	ENSOARG00000006740	SNRPB	74	94.186	Ovis_aries
ENSKMAG00000014494	snrpb	68	95.238	ENSPPAG00000036314	SNRPB	75	94.220	Pan_paniscus
ENSKMAG00000014494	snrpb	68	95.238	ENSPPRG00000003233	-	75	94.220	Panthera_pardus
ENSKMAG00000014494	snrpb	68	95.210	ENSPTIG00000007468	SNRPB	74	94.186	Panthera_tigris_altaica
ENSKMAG00000014494	snrpb	68	95.238	ENSPTRG00000013176	SNRPB	75	94.220	Pan_troglodytes
ENSKMAG00000014494	snrpb	68	95.238	ENSPANG00000020362	SNRPB	72	94.220	Papio_anubis
ENSKMAG00000014494	snrpb	68	98.795	ENSPKIG00000002865	snrpb	72	98.246	Paramormyrops_kingsleyae
ENSKMAG00000014494	snrpb	68	97.006	ENSPSIG00000014125	SNRPB	71	95.349	Pelodiscus_sinensis
ENSKMAG00000014494	snrpb	72	96.000	ENSPMGG00000016349	snrpb	71	96.988	Periophthalmus_magnuspinnatus
ENSKMAG00000014494	snrpb	68	95.238	ENSPEMG00000007948	Snrpb	75	94.220	Peromyscus_maniculatus_bairdii
ENSKMAG00000014494	snrpb	68	94.611	ENSPCIG00000004694	SNRPB	71	93.605	Phascolarctos_cinereus
ENSKMAG00000014494	snrpb	61	99.329	ENSPFOG00000011802	snrpb	63	99.329	Poecilia_formosa
ENSKMAG00000014494	snrpb	63	87.500	ENSPLAG00000014130	snrpb	59	99.259	Poecilia_latipinna
ENSKMAG00000014494	snrpb	55	99.259	ENSPREG00000015515	snrpb	62	99.259	Poecilia_reticulata
ENSKMAG00000014494	snrpb	68	95.238	ENSPPYG00000010841	SNRPB	75	94.220	Pongo_abelii
ENSKMAG00000014494	snrpb	68	95.238	ENSPCOG00000013686	SNRPB	75	94.220	Propithecus_coquereli
ENSKMAG00000014494	snrpb	68	94.048	ENSPVAG00000017013	SNRPB	60	93.064	Pteropus_vampyrus
ENSKMAG00000014494	snrpb	93	98.684	ENSPNYG00000014788	snrpb	95	98.684	Pundamilia_nyererei
ENSKMAG00000014494	snrpb	68	99.398	ENSPNAG00000016126	snrpb	71	99.412	Pygocentrus_nattereri
ENSKMAG00000014494	snrpb	68	95.238	ENSRNOG00000006961	Snrpb	73	100.000	Rattus_norvegicus
ENSKMAG00000014494	snrpb	68	95.238	ENSRBIG00000040505	SNRPB	75	94.220	Rhinopithecus_bieti
ENSKMAG00000014494	snrpb	68	95.238	ENSRROG00000036094	SNRPB	75	94.220	Rhinopithecus_roxellana
ENSKMAG00000014494	snrpb	68	95.238	ENSSBOG00000027310	SNRPB	75	94.220	Saimiri_boliviensis_boliviensis
ENSKMAG00000014494	snrpb	68	95.833	ENSSHAG00000010394	SNRPB	72	94.798	Sarcophilus_harrisii
ENSKMAG00000014494	snrpb	68	98.193	ENSSFOG00015002870	snrpb	72	98.246	Scleropages_formosus
ENSKMAG00000014494	snrpb	93	97.368	ENSSMAG00000006766	snrpb	95	97.368	Scophthalmus_maximus
ENSKMAG00000014494	snrpb	93	98.684	ENSSDUG00000018539	snrpb	95	98.684	Seriola_dumerili
ENSKMAG00000014494	snrpb	93	98.684	ENSSLDG00000022391	snrpb	95	98.684	Seriola_lalandi_dorsalis
ENSKMAG00000014494	snrpb	68	79.641	ENSSARG00000003084	SNRPB	74	79.070	Sorex_araneus
ENSKMAG00000014494	snrpb	68	97.006	ENSSPUG00000015659	SNRPB	72	95.349	Sphenodon_punctatus
ENSKMAG00000014494	snrpb	93	98.684	ENSSPAG00000021992	snrpb	95	98.684	Stegastes_partitus
ENSKMAG00000014494	snrpb	68	73.810	ENSSSCG00000011966	-	71	69.767	Sus_scrofa
ENSKMAG00000014494	snrpb	68	95.238	ENSSSCG00000040857	-	74	94.186	Sus_scrofa
ENSKMAG00000014494	snrpb	69	84.118	ENSTGUG00000005684	SNRPB	59	97.857	Taeniopygia_guttata
ENSKMAG00000014494	snrpb	94	96.522	ENSTRUG00000023094	snrpb	99	96.522	Takifugu_rubripes
ENSKMAG00000014494	snrpb	93	97.368	ENSTNIG00000002991	snrpb	95	97.368	Tetraodon_nigroviridis
ENSKMAG00000014494	snrpb	68	95.238	ENSUAMG00000005984	-	83	94.220	Ursus_americanus
ENSKMAG00000014494	snrpb	77	76.190	ENSUMAG00000002123	-	63	95.620	Ursus_maritimus
ENSKMAG00000014494	snrpb	68	94.643	ENSVVUG00000025654	-	72	93.642	Vulpes_vulpes
ENSKMAG00000014494	snrpb	92	74.236	ENSVVUG00000010086	-	74	76.301	Vulpes_vulpes
ENSKMAG00000014494	snrpb	61	98.667	ENSXETG00000027266	snrpb	73	94.220	Xenopus_tropicalis
ENSKMAG00000014494	snrpb	59	94.444	ENSXMAG00000028767	snrpb	58	99.259	Xiphophorus_maculatus