EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000014875 (Gene tree)
Gene ID: 108246720
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 7367 bases
Position: chrLWHD01000005.1:5089390-5096756
Accession: 108246720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020024	MMR_HSR1	PF01926.23	4e-06	1	1
ENSKMAP00000020007	MMR_HSR1	PF01926.23	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020290	-	393	-	ENSKMAP00000020024	130 (aa)	-	-
ENSKMAT00000020273	-	3073	XM_017434408	ENSKMAP00000020007	198 (aa)	XP_017289897	UPI0007F90D3F

Gene Model

Click here to download ENSKMAG00000014875's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000014875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000014875	-	95	30.928	ENSKMAG00000004435	arl3l2	95	30.928
ENSKMAG00000014875	-	86	35.043	ENSKMAG00000020210	arl4aa	70	35.811
ENSKMAG00000014875	-	82	35.514	ENSKMAG00000018315	-	59	35.514
ENSKMAG00000014875	-	78	35.294	ENSKMAG00000007316	arf2b	56	35.294
ENSKMAG00000014875	-	73	30.097	ENSKMAG00000016837	arfrp1	51	30.097
ENSKMAG00000014875	-	71	36.957	ENSKMAG00000011323	arl5c	51	36.957
ENSKMAG00000014875	-	91	30.435	ENSKMAG00000000815	-	89	30.435
ENSKMAG00000014875	-	75	30.928	ENSKMAG00000009772	arl3	53	30.928
ENSKMAG00000014875	-	78	33.663	ENSKMAG00000008864	-	78	33.588
ENSKMAG00000014875	-	94	30.526	ENSKMAG00000000362	ARL6	96	30.526
ENSKMAG00000014875	-	91	30.435	ENSKMAG00000004334	-	96	30.435
ENSKMAG00000014875	-	82	33.645	ENSKMAG00000019525	arf3b	78	31.690
ENSKMAG00000014875	-	71	35.870	ENSKMAG00000013576	arl8	51	35.870
ENSKMAG00000014875	-	73	32.414	ENSKMAG00000006196	arl8ba	73	32.414
ENSKMAG00000014875	-	86	31.395	ENSKMAG00000001256	arl11	77	31.395
ENSKMAG00000014875	-	86	33.333	ENSKMAG00000010409	arl14	81	33.333
ENSKMAG00000014875	-	92	37.302	ENSKMAG00000011334	arl4cb	69	35.766
ENSKMAG00000014875	-	100	84.343	ENSKMAG00000019693	sar1b	100	84.343
ENSKMAG00000014875	-	86	30.409	ENSKMAG00000017791	-	87	30.409
ENSKMAG00000014875	-	84	30.723	ENSKMAG00000005931	arl1	83	30.723
ENSKMAG00000014875	-	88	33.898	ENSKMAG00000020389	-	80	33.898
ENSKMAG00000014875	-	100	80.808	ENSKMAG00000018006	sar1ab	100	80.808
ENSKMAG00000014875	-	87	31.214	ENSKMAG00000012816	-	89	31.214
ENSKMAG00000014875	-	73	32.414	ENSKMAG00000002898	arl8a	73	32.414
ENSKMAG00000014875	-	81	34.286	ENSKMAG00000007118	arl2	78	35.417
ENSKMAG00000014875	-	82	33.645	ENSKMAG00000021494	-	78	31.690
ENSKMAG00000014875	-	78	32.381	ENSKMAG00000005826	ARL5A	59	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000014875	-	100	84.343	ENSAPOG00000007186	sar1b	100	84.343	Acanthochromis_polyacanthus
ENSKMAG00000014875	-	100	92.929	ENSAPOG00000017891	-	100	92.929	Acanthochromis_polyacanthus
ENSKMAG00000014875	-	100	83.838	ENSACIG00000013634	sar1b	100	83.838	Amphilophus_citrinellus
ENSKMAG00000014875	-	100	90.404	ENSACIG00000024513	-	100	90.404	Amphilophus_citrinellus
ENSKMAG00000014875	-	100	83.838	ENSAOCG00000005888	sar1b	100	83.838	Amphiprion_ocellaris
ENSKMAG00000014875	-	100	92.929	ENSAOCG00000002627	-	100	92.929	Amphiprion_ocellaris
ENSKMAG00000014875	-	100	92.929	ENSAPEG00000019680	-	100	92.929	Amphiprion_percula
ENSKMAG00000014875	-	100	83.838	ENSAPEG00000022771	sar1b	100	83.838	Amphiprion_percula
ENSKMAG00000014875	-	100	90.404	ENSATEG00000023368	-	100	90.404	Anabas_testudineus
ENSKMAG00000014875	-	100	84.343	ENSATEG00000012904	sar1b	100	84.343	Anabas_testudineus
ENSKMAG00000014875	-	100	83.333	ENSACAG00000001470	-	100	83.333	Anolis_carolinensis
ENSKMAG00000014875	-	100	90.909	ENSACLG00000005011	-	100	90.909	Astatotilapia_calliptera
ENSKMAG00000014875	-	100	83.838	ENSACLG00000014649	sar1b	100	83.838	Astatotilapia_calliptera
ENSKMAG00000014875	-	89	91.379	ENSAMXG00000018108	sar1b	83	91.379	Astyanax_mexicanus
ENSKMAG00000014875	-	100	88.384	ENSAMXG00000034192	-	91	88.384	Astyanax_mexicanus
ENSKMAG00000014875	-	100	89.899	ENSCSEG00000016976	-	100	89.899	Cynoglossus_semilaevis
ENSKMAG00000014875	-	100	77.778	ENSCSEG00000015238	sar1b	97	77.778	Cynoglossus_semilaevis
ENSKMAG00000014875	-	100	86.869	ENSCVAG00000022959	sar1b	100	86.869	Cyprinodon_variegatus
ENSKMAG00000014875	-	100	84.848	ENSDARG00000103403	sar1b	100	84.848	Danio_rerio
ENSKMAG00000014875	-	99	69.388	FBgn0038947	Sar1	99	69.388	Drosophila_melanogaster
ENSKMAG00000014875	-	97	79.688	ENSEBUG00000011723	sar1b	97	79.688	Eptatretus_burgeri
ENSKMAG00000014875	-	100	86.869	ENSELUG00000020912	sar1b	100	86.869	Esox_lucius
ENSKMAG00000014875	-	100	86.364	ENSFHEG00000019865	sar1b	100	86.364	Fundulus_heteroclitus
ENSKMAG00000014875	-	100	86.364	ENSGMOG00000008023	sar1b	100	86.364	Gadus_morhua
ENSKMAG00000014875	-	100	85.354	ENSGAFG00000007081	sar1b	100	85.354	Gambusia_affinis
ENSKMAG00000014875	-	100	83.333	ENSGACG00000001474	sar1b	100	83.333	Gasterosteus_aculeatus
ENSKMAG00000014875	-	100	90.909	ENSHBUG00000018397	-	100	90.909	Haplochromis_burtoni
ENSKMAG00000014875	-	100	83.838	ENSHBUG00000000915	sar1b	100	83.838	Haplochromis_burtoni
ENSKMAG00000014875	-	100	84.343	ENSHCOG00000010953	sar1b	100	84.343	Hippocampus_comes
ENSKMAG00000014875	-	100	83.333	ENSIPUG00000020925	sar1b	100	83.333	Ictalurus_punctatus
ENSKMAG00000014875	-	100	87.374	ENSIPUG00000010046	sar1b	100	87.374	Ictalurus_punctatus
ENSKMAG00000014875	-	100	91.919	ENSLBEG00000016945	-	100	91.919	Labrus_bergylta
ENSKMAG00000014875	-	100	81.818	ENSLBEG00000027550	sar1b	100	81.818	Labrus_bergylta
ENSKMAG00000014875	-	100	66.834	ENSLACG00000017029	-	100	66.834	Latimeria_chalumnae
ENSKMAG00000014875	-	100	79.293	ENSLACG00000010795	sar1b	100	79.293	Latimeria_chalumnae
ENSKMAG00000014875	-	100	85.354	ENSLOCG00000005214	-	100	85.354	Lepisosteus_oculatus
ENSKMAG00000014875	-	100	85.354	ENSLOCG00000010197	sar1b	100	85.354	Lepisosteus_oculatus
ENSKMAG00000014875	-	100	83.333	ENSMAMG00000021732	sar1b	100	83.333	Mastacembelus_armatus
ENSKMAG00000014875	-	100	90.909	ENSMZEG00005001012	-	100	90.909	Maylandia_zebra
ENSKMAG00000014875	-	100	83.838	ENSMZEG00005008942	sar1b	100	83.838	Maylandia_zebra
ENSKMAG00000014875	-	90	83.240	ENSMGAG00000005387	-	91	83.240	Meleagris_gallopavo
ENSKMAG00000014875	-	100	91.414	ENSMMOG00000013803	-	100	91.414	Mola_mola
ENSKMAG00000014875	-	100	83.838	ENSMALG00000016635	sar1b	97	82.967	Monopterus_albus
ENSKMAG00000014875	-	100	91.414	ENSNBRG00000014004	-	100	91.414	Neolamprologus_brichardi
ENSKMAG00000014875	-	100	83.838	ENSNBRG00000008013	sar1b	100	83.838	Neolamprologus_brichardi
ENSKMAG00000014875	-	100	83.333	ENSONIG00000017278	sar1b	100	83.333	Oreochromis_niloticus
ENSKMAG00000014875	-	100	83.838	ENSORLG00000000932	sar1b	100	83.838	Oryzias_latipes
ENSKMAG00000014875	-	100	83.838	ENSORLG00020021985	sar1b	100	83.838	Oryzias_latipes_hni
ENSKMAG00000014875	-	100	83.838	ENSORLG00015007044	sar1b	100	83.838	Oryzias_latipes_hsok
ENSKMAG00000014875	-	100	82.828	ENSOMEG00000001052	sar1b	100	82.828	Oryzias_melastigma
ENSKMAG00000014875	-	100	84.343	ENSPKIG00000010688	sar1b	100	84.343	Paramormyrops_kingsleyae
ENSKMAG00000014875	-	100	86.869	ENSPKIG00000017353	-	100	86.869	Paramormyrops_kingsleyae
ENSKMAG00000014875	-	89	88.793	ENSPMGG00000001234	sar1b	91	88.793	Periophthalmus_magnuspinnatus
ENSKMAG00000014875	-	100	79.104	ENSPMAG00000003593	sar1b	100	79.104	Petromyzon_marinus
ENSKMAG00000014875	-	100	84.848	ENSPFOG00000005666	sar1b	100	84.848	Poecilia_formosa
ENSKMAG00000014875	-	89	93.966	ENSPLAG00000001016	-	75	93.966	Poecilia_latipinna
ENSKMAG00000014875	-	100	84.343	ENSPLAG00000012223	sar1b	100	84.343	Poecilia_latipinna
ENSKMAG00000014875	-	100	84.848	ENSPMEG00000016831	sar1b	100	84.848	Poecilia_mexicana
ENSKMAG00000014875	-	89	93.966	ENSPREG00000002020	-	86	93.966	Poecilia_reticulata
ENSKMAG00000014875	-	100	84.848	ENSPREG00000005312	sar1b	90	84.848	Poecilia_reticulata
ENSKMAG00000014875	-	100	83.838	ENSPNYG00000012440	sar1b	100	83.838	Pundamilia_nyererei
ENSKMAG00000014875	-	100	91.414	ENSPNYG00000021357	-	100	91.414	Pundamilia_nyererei
ENSKMAG00000014875	-	100	85.354	ENSPNAG00000014683	sar1b	100	85.354	Pygocentrus_nattereri
ENSKMAG00000014875	-	100	89.394	ENSPNAG00000001123	-	100	89.394	Pygocentrus_nattereri
ENSKMAG00000014875	-	100	85.354	ENSSFOG00015018128	-	100	85.354	Scleropages_formosus
ENSKMAG00000014875	-	100	86.869	ENSSFOG00015020051	sar1b	100	86.869	Scleropages_formosus
ENSKMAG00000014875	-	100	90.404	ENSSMAG00000002165	-	100	90.404	Scophthalmus_maximus
ENSKMAG00000014875	-	100	82.323	ENSSMAG00000007106	sar1b	80	82.323	Scophthalmus_maximus
ENSKMAG00000014875	-	100	91.414	ENSSDUG00000019629	-	100	91.414	Seriola_dumerili
ENSKMAG00000014875	-	100	84.343	ENSSDUG00000020926	sar1b	100	84.343	Seriola_dumerili
ENSKMAG00000014875	-	100	91.414	ENSSLDG00000024197	-	100	91.414	Seriola_lalandi_dorsalis
ENSKMAG00000014875	-	100	84.343	ENSSLDG00000017052	sar1b	100	85.833	Seriola_lalandi_dorsalis
ENSKMAG00000014875	-	100	82.323	ENSSPUG00000010247	-	100	82.323	Sphenodon_punctatus
ENSKMAG00000014875	-	100	84.848	ENSSPAG00000017634	sar1b	100	84.848	Stegastes_partitus
ENSKMAG00000014875	-	100	91.919	ENSSPAG00000015626	-	100	91.919	Stegastes_partitus
ENSKMAG00000014875	-	100	80.808	ENSTRUG00000023908	sar1b	100	80.808	Takifugu_rubripes
ENSKMAG00000014875	-	100	82.323	ENSTNIG00000016097	sar1b	100	82.323	Tetraodon_nigroviridis
ENSKMAG00000014875	-	90	84.831	ENSXCOG00000004160	sar1b	87	84.831	Xiphophorus_couchianus
ENSKMAG00000014875	-	96	88.800	ENSXCOG00000006154	-	82	88.800	Xiphophorus_couchianus
ENSKMAG00000014875	-	100	85.354	ENSXMAG00000008294	sar1b	100	85.354	Xiphophorus_maculatus