EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000014937 (Gene tree)
Gene ID: 108236684
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7833 bases
Position: chrLWHD01000002.1:9707275-9715107
Accession: 108236684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020107	RRM_1	PF00076.22	2.3e-32	1	2
ENSKMAP00000020107	RRM_1	PF00076.22	2.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020374	-	1861	XM_017417539	ENSKMAP00000020107	324 (aa)	XP_017273028	UPI0007F86510

Gene Model

Click here to download ENSKMAG00000014937's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG
kmr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000014937's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000014937	srsf5a	54	42.541	ENSKMAG00000019232	srsf1a	66	42.222
ENSKMAG00000014937	srsf5a	58	39.394	ENSKMAG00000007113	srsf9	74	41.206
ENSKMAG00000014937	srsf5a	57	58.152	ENSKMAG00000011934	srsf6a	57	57.065
ENSKMAG00000014937	srsf5a	57	62.703	ENSKMAG00000013631	srsf4	80	52.582
ENSKMAG00000014937	srsf5a	90	53.220	ENSKMAG00000020486	srsf5b	90	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000014937	srsf5a	71	81.356	ENSAPOG00000017395	srsf5a	78	72.034	Acanthochromis_polyacanthus
ENSKMAG00000014937	srsf5a	72	74.262	ENSACIG00000011892	srsf5a	96	81.481	Amphilophus_citrinellus
ENSKMAG00000014937	srsf5a	71	79.583	ENSAOCG00000014967	srsf5a	87	70.611	Amphiprion_ocellaris
ENSKMAG00000014937	srsf5a	71	79.583	ENSAPEG00000009297	srsf5a	80	70.833	Amphiprion_percula
ENSKMAG00000014937	srsf5a	72	80.672	ENSATEG00000000198	srsf5a	82	78.814	Anabas_testudineus
ENSKMAG00000014937	srsf5a	58	70.984	ENSAPLG00000002469	-	70	70.000	Anas_platyrhynchos
ENSKMAG00000014937	srsf5a	58	68.528	ENSACAG00000029015	-	68	71.809	Anolis_carolinensis
ENSKMAG00000014937	srsf5a	71	83.264	ENSACLG00000027166	srsf5a	86	78.277	Astatotilapia_calliptera
ENSKMAG00000014937	srsf5a	58	80.105	ENSAMXG00000030476	srsf5a	67	79.787	Astyanax_mexicanus
ENSKMAG00000014937	srsf5a	58	72.105	ENSCPBG00000021518	-	70	71.277	Chrysemys_picta_bellii
ENSKMAG00000014937	srsf5a	58	55.276	ENSCSAVG00000011376	-	78	56.633	Ciona_savignyi
ENSKMAG00000014937	srsf5a	58	85.492	ENSCSEG00000008109	srsf5a	62	82.902	Cynoglossus_semilaevis
ENSKMAG00000014937	srsf5a	71	78.601	ENSCVAG00000016982	srsf5a	97	78.358	Cyprinodon_variegatus
ENSKMAG00000014937	srsf5a	75	73.333	ENSDARG00000029818	srsf5a	100	75.912	Danio_rerio
ENSKMAG00000014937	srsf5a	75	66.534	ENSELUG00000020439	srsf5a	62	75.127	Esox_lucius
ENSKMAG00000014937	srsf5a	58	71.429	ENSFALG00000005098	-	64	70.745	Ficedula_albicollis
ENSKMAG00000014937	srsf5a	73	76.062	ENSFHEG00000003955	srsf5a	97	74.483	Fundulus_heteroclitus
ENSKMAG00000014937	srsf5a	58	79.787	ENSGMOG00000000869	srsf5a	94	79.255	Gadus_morhua
ENSKMAG00000014937	srsf5a	58	71.809	ENSGALG00000033259	SRSF5A	63	70.745	Gallus_gallus
ENSKMAG00000014937	srsf5a	73	70.683	ENSGAFG00000018237	srsf5a	54	73.404	Gambusia_affinis
ENSKMAG00000014937	srsf5a	58	72.105	ENSGAGG00000007312	-	70	71.277	Gopherus_agassizii
ENSKMAG00000014937	srsf5a	71	83.264	ENSHBUG00000014048	srsf5a	86	77.444	Haplochromis_burtoni
ENSKMAG00000014937	srsf5a	79	66.418	ENSHCOG00000017557	srsf5a	62	83.511	Hippocampus_comes
ENSKMAG00000014937	srsf5a	58	82.723	ENSIPUG00000003439	srsf5a	69	81.053	Ictalurus_punctatus
ENSKMAG00000014937	srsf5a	58	83.590	ENSLBEG00000017153	srsf5a	74	83.590	Labrus_bergylta
ENSKMAG00000014937	srsf5a	58	73.822	ENSLACG00000017874	-	72	75.263	Latimeria_chalumnae
ENSKMAG00000014937	srsf5a	58	80.628	ENSLOCG00000014075	srsf5a	61	80.851	Lepisosteus_oculatus
ENSKMAG00000014937	srsf5a	72	78.661	ENSMAMG00000000192	srsf5a	82	77.778	Mastacembelus_armatus
ENSKMAG00000014937	srsf5a	71	83.264	ENSMZEG00005010485	srsf5a	86	77.444	Maylandia_zebra
ENSKMAG00000014937	srsf5a	75	65.574	ENSMGAG00000011888	-	96	70.000	Meleagris_gallopavo
ENSKMAG00000014937	srsf5a	58	82.979	ENSMMOG00000009793	srsf5a	61	82.979	Mola_mola
ENSKMAG00000014937	srsf5a	72	70.513	ENSMALG00000021194	srsf5a	80	78.205	Monopterus_albus
ENSKMAG00000014937	srsf5a	71	82.845	ENSNBRG00000000771	srsf5a	86	77.736	Neolamprologus_brichardi
ENSKMAG00000014937	srsf5a	71	82.845	ENSONIG00000019583	srsf5a	86	77.736	Oreochromis_niloticus
ENSKMAG00000014937	srsf5a	71	84.322	ENSORLG00000009268	srsf5a	83	83.262	Oryzias_latipes
ENSKMAG00000014937	srsf5a	71	84.322	ENSORLG00020003281	srsf5	83	83.262	Oryzias_latipes_hni
ENSKMAG00000014937	srsf5a	71	84.322	ENSORLG00015023075	srsf5	83	83.262	Oryzias_latipes_hsok
ENSKMAG00000014937	srsf5a	71	83.051	ENSOMEG00000000628	srsf5a	83	83.691	Oryzias_melastigma
ENSKMAG00000014937	srsf5a	89	68.041	ENSPKIG00000002054	srsf5a	68	79.787	Paramormyrops_kingsleyae
ENSKMAG00000014937	srsf5a	58	71.579	ENSPSIG00000008238	-	69	70.370	Pelodiscus_sinensis
ENSKMAG00000014937	srsf5a	59	76.684	ENSPMGG00000020125	srsf5a	55	76.596	Periophthalmus_magnuspinnatus
ENSKMAG00000014937	srsf5a	91	76.677	ENSPFOG00000022993	srsf5a	60	83.770	Poecilia_formosa
ENSKMAG00000014937	srsf5a	90	76.603	ENSPLAG00000005508	srsf5a	59	83.684	Poecilia_latipinna
ENSKMAG00000014937	srsf5a	91	76.677	ENSPMEG00000016339	srsf5a	60	83.770	Poecilia_mexicana
ENSKMAG00000014937	srsf5a	91	71.975	ENSPREG00000018091	srsf5a	61	81.771	Poecilia_reticulata
ENSKMAG00000014937	srsf5a	71	83.264	ENSPNYG00000021245	srsf5a	86	77.444	Pundamilia_nyererei
ENSKMAG00000014937	srsf5a	58	79.581	ENSPNAG00000021333	srsf5a	66	79.255	Pygocentrus_nattereri
ENSKMAG00000014937	srsf5a	58	81.675	ENSSFOG00015008377	srsf5	66	80.851	Scleropages_formosus
ENSKMAG00000014937	srsf5a	100	65.896	ENSSMAG00000010899	srsf5a	100	69.653	Scophthalmus_maximus
ENSKMAG00000014937	srsf5a	72	79.832	ENSSDUG00000006103	srsf5a	80	70.763	Seriola_dumerili
ENSKMAG00000014937	srsf5a	72	80.252	ENSSLDG00000004146	srsf5a	79	71.186	Seriola_lalandi_dorsalis
ENSKMAG00000014937	srsf5a	58	68.085	ENSSPUG00000002052	-	68	68.617	Sphenodon_punctatus
ENSKMAG00000014937	srsf5a	71	80.508	ENSSPAG00000002821	srsf5a	87	72.727	Stegastes_partitus
ENSKMAG00000014937	srsf5a	58	71.204	ENSTGUG00000011492	-	68	70.745	Taeniopygia_guttata
ENSKMAG00000014937	srsf5a	58	82.292	ENSTRUG00000022908	srsf5a	65	81.250	Takifugu_rubripes
ENSKMAG00000014937	srsf5a	99	60.494	ENSXETG00000017937	srsf5a	72	73.958	Xenopus_tropicalis
ENSKMAG00000014937	srsf5a	73	78.715	ENSXCOG00000015338	srsf5a	61	82.199	Xiphophorus_couchianus
ENSKMAG00000014937	srsf5a	91	71.885	ENSXMAG00000012823	srsf5a	61	83.420	Xiphophorus_maculatus