EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000015015 (Gene tree)
Gene ID: 108232141
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 5104 bases
Position: chrLWHD01000014.1:4359131-4364234
Accession: 108232141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020190	MBD	PF01429.19	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020457	-	1627	XM_017409746	ENSKMAP00000020190	463 (aa)	XP_017265235	UPI0007F8F993

Gene Model

Click here to download ENSKMAG00000015015's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015015	mbd4	53	73.545	ENSG00000129071	MBD4	65	79.290	Homo_sapiens
ENSKMAG00000015015	mbd4	100	65.073	ENSAPOG00000021668	mbd4	98	64.033	Acanthochromis_polyacanthus
ENSKMAG00000015015	mbd4	100	64.449	ENSAOCG00000001157	mbd4	98	64.449	Amphiprion_ocellaris
ENSKMAG00000015015	mbd4	100	64.449	ENSAPEG00000016131	mbd4	98	64.449	Amphiprion_percula
ENSKMAG00000015015	mbd4	98	62.473	ENSATEG00000014594	MBD4	86	63.067	Anabas_testudineus
ENSKMAG00000015015	mbd4	82	58.964	ENSAMXG00000017271	mbd4	77	57.634	Astyanax_mexicanus
ENSKMAG00000015015	mbd4	84	39.372	ENSDORG00000000902	-	88	38.756	Dipodomys_ordii
ENSKMAG00000015015	mbd4	51	63.584	ENSEBUG00000010816	mbd4	53	63.584	Eptatretus_burgeri
ENSKMAG00000015015	mbd4	92	42.292	ENSEEUG00000011459	MBD4	87	41.079	Erinaceus_europaeus
ENSKMAG00000015015	mbd4	98	46.169	ENSELUG00000018483	MBD4	82	45.635	Esox_lucius
ENSKMAG00000015015	mbd4	97	48.857	ENSGMOG00000013830	mbd4	100	47.619	Gadus_morhua
ENSKMAG00000015015	mbd4	100	63.966	ENSGAFG00000016011	mbd4	100	63.191	Gambusia_affinis
ENSKMAG00000015015	mbd4	94	42.792	ENSGACG00000001970	-	83	45.320	Gasterosteus_aculeatus
ENSKMAG00000015015	mbd4	97	59.013	ENSLBEG00000005669	MBD4	86	58.351	Labrus_bergylta
ENSKMAG00000015015	mbd4	61	44.599	ENSMAMG00000024084	-	76	44.599	Mastacembelus_armatus
ENSKMAG00000015015	mbd4	97	45.325	ENSMODG00000006399	-	50	81.065	Monodelphis_domestica
ENSKMAG00000015015	mbd4	98	60.897	ENSMALG00000021517	mbd4	87	60.470	Monopterus_albus
ENSKMAG00000015015	mbd4	97	58.799	ENSONIG00000017212	mbd4	100	57.971	Oreochromis_niloticus
ENSKMAG00000015015	mbd4	97	55.752	ENSORLG00000011049	mbd4	97	55.752	Oryzias_latipes
ENSKMAG00000015015	mbd4	97	55.531	ENSORLG00020020013	mbd4	97	55.531	Oryzias_latipes_hni
ENSKMAG00000015015	mbd4	97	55.973	ENSORLG00015015342	mbd4	97	55.973	Oryzias_latipes_hsok
ENSKMAG00000015015	mbd4	98	57.363	ENSOMEG00000008819	mbd4	91	56.923	Oryzias_melastigma
ENSKMAG00000015015	mbd4	97	44.654	ENSPKIG00000012306	MBD4	75	43.629	Paramormyrops_kingsleyae
ENSKMAG00000015015	mbd4	100	64.043	ENSPFOG00000014471	mbd4	100	62.979	Poecilia_formosa
ENSKMAG00000015015	mbd4	97	37.447	ENSRROG00000029136	MBD4	83	37.447	Rhinopithecus_roxellana
ENSKMAG00000015015	mbd4	98	45.859	ENSSFOG00015016292	mbd4	55	72.222	Scleropages_formosus
ENSKMAG00000015015	mbd4	97	58.824	ENSSMAG00000013958	-	68	57.484	Scophthalmus_maximus
ENSKMAG00000015015	mbd4	97	63.696	ENSSDUG00000001365	mbd4	93	61.957	Seriola_dumerili
ENSKMAG00000015015	mbd4	85	59.553	ENSSLDG00000010295	MBD4	80	57.568	Seriola_lalandi_dorsalis
ENSKMAG00000015015	mbd4	98	55.361	ENSTRUG00000010124	mbd4	96	53.747	Takifugu_rubripes
ENSKMAG00000015015	mbd4	97	49.894	ENSTNIG00000017927	mbd4	100	48.171	Tetraodon_nigroviridis
ENSKMAG00000015015	mbd4	100	64.606	ENSXMAG00000021129	mbd4	100	63.830	Xiphophorus_maculatus