EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015204 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK associated RH domain interactor
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7817 bases
Position: chrLWHD01000066.1:2448034-2455850
Accession: 108239662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020572	zf-RanBP	PF00641.18	1.5e-06	1	1
ENSKMAP00000020512	zf-RanBP	PF00641.18	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020809	-	813	-	ENSKMAP00000020540	270 (aa)	-	-
ENSKMAT00000020841	-	813	-	ENSKMAP00000020572	270 (aa)	-	-
ENSKMAT00000020781	-	1581	XM_017422529	ENSKMAP00000020512	526 (aa)	XP_017278018	-

Gene Model

Click here to download ENSKMAG00000015204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015204	sharpin	76	56.009	ENSKMAG00000015215	shrprbck1r	60	56.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015204	sharpin	76	59.251	ENSAPOG00000022737	shrprbck1r	60	59.251	Acanthochromis_polyacanthus
ENSKMAG00000015204	sharpin	77	82.639	ENSAPOG00000023352	sharpin	96	82.639	Acanthochromis_polyacanthus
ENSKMAG00000015204	sharpin	76	57.971	ENSACIG00000002184	shrprbck1r	87	57.971	Amphilophus_citrinellus
ENSKMAG00000015204	sharpin	76	57.373	ENSAOCG00000002890	shrprbck1r	60	57.373	Amphiprion_ocellaris
ENSKMAG00000015204	sharpin	77	83.333	ENSAOCG00000017464	sharpin	96	83.333	Amphiprion_ocellaris
ENSKMAG00000015204	sharpin	77	83.333	ENSAPEG00000004049	sharpin	96	83.333	Amphiprion_percula
ENSKMAG00000015204	sharpin	76	59.472	ENSAPEG00000023274	shrprbck1r	59	59.472	Amphiprion_percula
ENSKMAG00000015204	sharpin	76	57.547	ENSATEG00000014561	shrprbck1r	59	58.432	Anabas_testudineus
ENSKMAG00000015204	sharpin	77	81.733	ENSATEG00000007832	sharpin	88	81.733	Anabas_testudineus
ENSKMAG00000015204	sharpin	78	64.455	ENSACLG00000020160	-	86	93.939	Astatotilapia_calliptera
ENSKMAG00000015204	sharpin	76	57.349	ENSACLG00000022609	shrprbck1r	60	56.977	Astatotilapia_calliptera
ENSKMAG00000015204	sharpin	76	59.048	ENSAMXG00000021016	shrprbck1r	66	58.087	Astyanax_mexicanus
ENSKMAG00000015204	sharpin	79	56.048	ENSAMXG00000006229	sharpin	96	57.963	Astyanax_mexicanus
ENSKMAG00000015204	sharpin	76	51.765	ENSCSEG00000011306	shrprbck1r	59	52.941	Cynoglossus_semilaevis
ENSKMAG00000015204	sharpin	76	55.093	ENSCVAG00000007250	shrprbck1r	59	55.093	Cyprinodon_variegatus
ENSKMAG00000015204	sharpin	77	77.546	ENSCVAG00000006586	sharpin	96	77.546	Cyprinodon_variegatus
ENSKMAG00000015204	sharpin	80	46.850	ENSDARG00000076995	sharpin	94	55.499	Danio_rerio
ENSKMAG00000015204	sharpin	76	57.110	ENSDARG00000059871	shrprbck1r	89	57.110	Danio_rerio
ENSKMAG00000015204	sharpin	76	58.531	ENSELUG00000016022	shrprbck1r	59	58.531	Esox_lucius
ENSKMAG00000015204	sharpin	77	78.241	ENSFHEG00000013564	sharpin	96	78.241	Fundulus_heteroclitus
ENSKMAG00000015204	sharpin	62	87.500	ENSGMOG00000010123	sharpin	89	87.500	Gadus_morhua
ENSKMAG00000015204	sharpin	80	51.020	ENSGAFG00000009309	shrprbck1r	59	54.861	Gambusia_affinis
ENSKMAG00000015204	sharpin	79	65.455	ENSGAFG00000021405	sharpin	97	61.314	Gambusia_affinis
ENSKMAG00000015204	sharpin	76	56.512	ENSHBUG00000021933	shrprbck1r	60	57.209	Haplochromis_burtoni
ENSKMAG00000015204	sharpin	85	64.795	ENSHCOG00000018847	sharpin	89	64.795	Hippocampus_comes
ENSKMAG00000015204	sharpin	63	80.000	ENSIPUG00000011951	sharpin	95	80.000	Ictalurus_punctatus
ENSKMAG00000015204	sharpin	71	57.393	ENSIPUG00000014247	shrprbck1r	58	55.556	Ictalurus_punctatus
ENSKMAG00000015204	sharpin	76	55.944	ENSLBEG00000016876	shrprbck1r	60	56.410	Labrus_bergylta
ENSKMAG00000015204	sharpin	76	80.841	ENSLBEG00000016624	sharpin	95	80.841	Labrus_bergylta
ENSKMAG00000015204	sharpin	79	43.874	ENSLACG00000010948	-	57	47.089	Latimeria_chalumnae
ENSKMAG00000015204	sharpin	76	60.142	ENSLOCG00000008910	shrprbck1r	59	60.563	Lepisosteus_oculatus
ENSKMAG00000015204	sharpin	76	57.042	ENSMAMG00000022930	shrprbck1r	60	57.512	Mastacembelus_armatus
ENSKMAG00000015204	sharpin	64	96.552	ENSMAMG00000014645	sharpin	94	96.552	Mastacembelus_armatus
ENSKMAG00000015204	sharpin	76	56.512	ENSMZEG00005021257	shrprbck1r	60	56.977	Maylandia_zebra
ENSKMAG00000015204	sharpin	76	56.731	ENSMMOG00000003764	shrprbck1r	59	57.143	Mola_mola
ENSKMAG00000015204	sharpin	64	87.640	ENSMMOG00000016788	sharpin	91	87.640	Mola_mola
ENSKMAG00000015204	sharpin	64	96.552	ENSMALG00000020528	sharpin	95	96.552	Monopterus_albus
ENSKMAG00000015204	sharpin	70	57.868	ENSMALG00000008861	shrprbck1r	55	57.868	Monopterus_albus
ENSKMAG00000015204	sharpin	76	56.047	ENSNBRG00000002270	shrprbck1r	60	56.512	Neolamprologus_brichardi
ENSKMAG00000015204	sharpin	79	72.072	ENSNBRG00000012382	sharpin	94	63.272	Neolamprologus_brichardi
ENSKMAG00000015204	sharpin	76	76.279	ENSONIG00000009626	-	100	72.837	Oreochromis_niloticus
ENSKMAG00000015204	sharpin	76	56.944	ENSONIG00000014401	shrprbck1r	59	57.407	Oreochromis_niloticus
ENSKMAG00000015204	sharpin	76	56.944	ENSORLG00000007392	shrprbck1r	60	56.944	Oryzias_latipes
ENSKMAG00000015204	sharpin	77	77.986	ENSORLG00000017281	sharpin	96	77.986	Oryzias_latipes
ENSKMAG00000015204	sharpin	76	56.019	ENSORLG00020018619	shrprbck1r	60	56.019	Oryzias_latipes_hni
ENSKMAG00000015204	sharpin	77	78.220	ENSORLG00020000801	sharpin	97	78.220	Oryzias_latipes_hni
ENSKMAG00000015204	sharpin	76	55.787	ENSORLG00015018865	shrprbck1r	59	55.787	Oryzias_latipes_hsok
ENSKMAG00000015204	sharpin	75	86.111	ENSORLG00015009860	sharpin	96	78.169	Oryzias_latipes_hsok
ENSKMAG00000015204	sharpin	76	56.944	ENSOMEG00000012749	shrprbck1r	60	56.944	Oryzias_melastigma
ENSKMAG00000015204	sharpin	65	85.294	ENSOMEG00000005729	sharpin	91	82.857	Oryzias_melastigma
ENSKMAG00000015204	sharpin	76	64.678	ENSPKIG00000006933	shrprbck1r	59	65.632	Paramormyrops_kingsleyae
ENSKMAG00000015204	sharpin	76	60.993	ENSPKIG00000018308	-	87	60.839	Paramormyrops_kingsleyae
ENSKMAG00000015204	sharpin	76	56.595	ENSPMGG00000013254	shrprbck1r	58	56.595	Periophthalmus_magnuspinnatus
ENSKMAG00000015204	sharpin	50	93.103	ENSPMGG00000019318	sharpin	96	93.103	Periophthalmus_magnuspinnatus
ENSKMAG00000015204	sharpin	77	78.472	ENSPFOG00000015253	sharpin	96	78.472	Poecilia_formosa
ENSKMAG00000015204	sharpin	76	56.582	ENSPFOG00000004214	shrprbck1r	88	56.582	Poecilia_formosa
ENSKMAG00000015204	sharpin	77	78.704	ENSPLAG00000000423	sharpin	96	78.704	Poecilia_latipinna
ENSKMAG00000015204	sharpin	76	56.019	ENSPLAG00000020523	shrprbck1r	59	55.991	Poecilia_latipinna
ENSKMAG00000015204	sharpin	76	55.478	ENSPMEG00000006877	shrprbck1r	59	55.478	Poecilia_mexicana
ENSKMAG00000015204	sharpin	77	60.197	ENSPMEG00000023030	sharpin	91	60.197	Poecilia_mexicana
ENSKMAG00000015204	sharpin	76	54.588	ENSPREG00000014689	shrprbck1r	59	54.588	Poecilia_reticulata
ENSKMAG00000015204	sharpin	77	78.472	ENSPREG00000009702	sharpin	96	78.472	Poecilia_reticulata
ENSKMAG00000015204	sharpin	76	56.512	ENSPNYG00000022601	shrprbck1r	60	56.977	Pundamilia_nyererei
ENSKMAG00000015204	sharpin	76	55.603	ENSPNAG00000002911	sharpin	99	56.085	Pygocentrus_nattereri
ENSKMAG00000015204	sharpin	76	57.569	ENSPNAG00000007847	shrprbck1r	60	57.991	Pygocentrus_nattereri
ENSKMAG00000015204	sharpin	76	63.551	ENSSFOG00015004028	sharpin	92	53.813	Scleropages_formosus
ENSKMAG00000015204	sharpin	76	56.982	ENSSMAG00000018085	shrprbck1r	60	57.466	Scophthalmus_maximus
ENSKMAG00000015204	sharpin	76	57.176	ENSSDUG00000002959	shrprbck1r	59	58.102	Seriola_dumerili
ENSKMAG00000015204	sharpin	78	77.251	ENSSDUG00000019039	sharpin	95	62.708	Seriola_dumerili
ENSKMAG00000015204	sharpin	76	57.870	ENSSLDG00000009026	shrprbck1r	60	58.796	Seriola_lalandi_dorsalis
ENSKMAG00000015204	sharpin	79	66.667	ENSSPAG00000021807	sharpin	92	81.308	Stegastes_partitus
ENSKMAG00000015204	sharpin	76	59.390	ENSSPAG00000016097	shrprbck1r	61	59.390	Stegastes_partitus
ENSKMAG00000015204	sharpin	76	56.802	ENSTRUG00000006949	shrprbck1r	58	57.279	Takifugu_rubripes
ENSKMAG00000015204	sharpin	77	67.442	ENSTRUG00000011046	sharpin	96	68.421	Takifugu_rubripes
ENSKMAG00000015204	sharpin	76	74.178	ENSTNIG00000008521	sharpin	98	71.394	Tetraodon_nigroviridis
ENSKMAG00000015204	sharpin	76	56.220	ENSXCOG00000006701	shrprbck1r	58	56.220	Xiphophorus_couchianus
ENSKMAG00000015204	sharpin	67	94.595	ENSXCOG00000015019	sharpin	99	94.595	Xiphophorus_couchianus
ENSKMAG00000015204	sharpin	77	78.190	ENSXMAG00000022076	sharpin	96	78.190	Xiphophorus_maculatus
ENSKMAG00000015204	sharpin	76	55.981	ENSXMAG00000018972	shrprbck1r	58	55.981	Xiphophorus_maculatus