EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015215 (Gene tree)
Gene ID: 108243123
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 7736 bases
Position: chrLWHD01000112.1:344244-351979
Accession: 108243123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020502	zf-RanBP	PF00641.18	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020771	-	2160	XM_017428373	ENSKMAP00000020502	719 (aa)	XP_017283862	-

Gene Model

Click here to download ENSKMAG00000015215's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr04217	Necroptosis	KEGG
kmr04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015215	shrprbck1r	60	56.236	ENSKMAG00000015204	sharpin	76	56.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015215	shrprbck1r	60	56.164	ENSAPOG00000023352	sharpin	95	56.109	Acanthochromis_polyacanthus
ENSKMAG00000015215	shrprbck1r	100	81.793	ENSAPOG00000022737	shrprbck1r	100	82.197	Acanthochromis_polyacanthus
ENSKMAG00000015215	shrprbck1r	100	78.641	ENSACIG00000002184	shrprbck1r	100	77.854	Amphilophus_citrinellus
ENSKMAG00000015215	shrprbck1r	60	56.393	ENSAOCG00000017464	sharpin	95	56.335	Amphiprion_ocellaris
ENSKMAG00000015215	shrprbck1r	100	82.256	ENSAOCG00000002890	shrprbck1r	100	81.981	Amphiprion_ocellaris
ENSKMAG00000015215	shrprbck1r	60	56.393	ENSAPEG00000004049	sharpin	95	56.335	Amphiprion_percula
ENSKMAG00000015215	shrprbck1r	100	82.337	ENSAPEG00000023274	shrprbck1r	100	82.615	Amphiprion_percula
ENSKMAG00000015215	shrprbck1r	60	56.335	ENSATEG00000007832	sharpin	88	56.621	Anabas_testudineus
ENSKMAG00000015215	shrprbck1r	100	80.556	ENSATEG00000014561	shrprbck1r	100	80.833	Anabas_testudineus
ENSKMAG00000015215	shrprbck1r	100	78.641	ENSACLG00000022609	shrprbck1r	100	78.641	Astatotilapia_calliptera
ENSKMAG00000015215	shrprbck1r	55	56.709	ENSAMXG00000006229	sharpin	97	56.709	Astyanax_mexicanus
ENSKMAG00000015215	shrprbck1r	100	66.711	ENSAMXG00000021016	shrprbck1r	100	66.801	Astyanax_mexicanus
ENSKMAG00000015215	shrprbck1r	100	75.035	ENSCSEG00000011306	shrprbck1r	100	75.035	Cynoglossus_semilaevis
ENSKMAG00000015215	shrprbck1r	60	53.075	ENSCVAG00000006586	sharpin	95	53.075	Cyprinodon_variegatus
ENSKMAG00000015215	shrprbck1r	100	78.532	ENSCVAG00000007250	shrprbck1r	100	78.532	Cyprinodon_variegatus
ENSKMAG00000015215	shrprbck1r	100	68.219	ENSDARG00000059871	shrprbck1r	100	68.356	Danio_rerio
ENSKMAG00000015215	shrprbck1r	55	54.798	ENSDARG00000076995	sharpin	95	54.798	Danio_rerio
ENSKMAG00000015215	shrprbck1r	100	72.865	ENSELUG00000016022	shrprbck1r	100	72.590	Esox_lucius
ENSKMAG00000015215	shrprbck1r	60	53.950	ENSFHEG00000013564	sharpin	94	53.725	Fundulus_heteroclitus
ENSKMAG00000015215	shrprbck1r	51	59.104	ENSGMOG00000010123	sharpin	91	57.910	Gadus_morhua
ENSKMAG00000015215	shrprbck1r	60	43.187	ENSGAFG00000021405	sharpin	95	42.227	Gambusia_affinis
ENSKMAG00000015215	shrprbck1r	100	76.818	ENSGAFG00000009309	shrprbck1r	100	77.424	Gambusia_affinis
ENSKMAG00000015215	shrprbck1r	74	80.000	ENSGACG00000002544	shrprbck1r	99	80.000	Gasterosteus_aculeatus
ENSKMAG00000015215	shrprbck1r	100	78.641	ENSHBUG00000021933	shrprbck1r	100	78.562	Haplochromis_burtoni
ENSKMAG00000015215	shrprbck1r	61	51.716	ENSHCOG00000018847	sharpin	80	51.606	Hippocampus_comes
ENSKMAG00000015215	shrprbck1r	96	66.857	ENSIPUG00000014247	shrprbck1r	100	65.021	Ictalurus_punctatus
ENSKMAG00000015215	shrprbck1r	54	54.660	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSKMAG00000015215	shrprbck1r	60	56.433	ENSLBEG00000016624	sharpin	96	56.433	Labrus_bergylta
ENSKMAG00000015215	shrprbck1r	100	79.530	ENSLBEG00000016876	shrprbck1r	100	79.806	Labrus_bergylta
ENSKMAG00000015215	shrprbck1r	95	52.670	ENSLACG00000010948	-	97	52.237	Latimeria_chalumnae
ENSKMAG00000015215	shrprbck1r	100	68.486	ENSLOCG00000008910	shrprbck1r	100	68.399	Lepisosteus_oculatus
ENSKMAG00000015215	shrprbck1r	100	77.778	ENSMAMG00000022930	shrprbck1r	100	77.701	Mastacembelus_armatus
ENSKMAG00000015215	shrprbck1r	51	67.742	ENSMAMG00000014645	sharpin	95	67.742	Mastacembelus_armatus
ENSKMAG00000015215	shrprbck1r	100	78.502	ENSMZEG00005021257	shrprbck1r	100	78.502	Maylandia_zebra
ENSKMAG00000015215	shrprbck1r	100	77.562	ENSMMOG00000003764	shrprbck1r	100	77.732	Mola_mola
ENSKMAG00000015215	shrprbck1r	95	79.825	ENSMALG00000008861	shrprbck1r	96	79.710	Monopterus_albus
ENSKMAG00000015215	shrprbck1r	51	67.742	ENSMALG00000020528	sharpin	96	67.742	Monopterus_albus
ENSKMAG00000015215	shrprbck1r	100	78.363	ENSNBRG00000002270	shrprbck1r	100	78.363	Neolamprologus_brichardi
ENSKMAG00000015215	shrprbck1r	55	54.964	ENSONIG00000009626	-	97	54.964	Oreochromis_niloticus
ENSKMAG00000015215	shrprbck1r	100	78.502	ENSONIG00000014401	shrprbck1r	100	78.363	Oreochromis_niloticus
ENSKMAG00000015215	shrprbck1r	60	55.430	ENSORLG00000017281	sharpin	95	54.977	Oryzias_latipes
ENSKMAG00000015215	shrprbck1r	100	78.720	ENSORLG00000007392	shrprbck1r	100	78.720	Oryzias_latipes
ENSKMAG00000015215	shrprbck1r	100	77.992	ENSORLG00020018619	shrprbck1r	100	78.720	Oryzias_latipes_hni
ENSKMAG00000015215	shrprbck1r	60	54.977	ENSORLG00020000801	sharpin	95	54.525	Oryzias_latipes_hni
ENSKMAG00000015215	shrprbck1r	100	78.442	ENSORLG00015018865	shrprbck1r	100	78.442	Oryzias_latipes_hsok
ENSKMAG00000015215	shrprbck1r	60	55.204	ENSORLG00015009860	sharpin	95	54.751	Oryzias_latipes_hsok
ENSKMAG00000015215	shrprbck1r	100	78.562	ENSOMEG00000012749	shrprbck1r	100	78.860	Oryzias_melastigma
ENSKMAG00000015215	shrprbck1r	52	53.191	ENSOMEG00000005729	sharpin	89	53.191	Oryzias_melastigma
ENSKMAG00000015215	shrprbck1r	100	70.055	ENSPKIG00000006933	shrprbck1r	100	70.776	Paramormyrops_kingsleyae
ENSKMAG00000015215	shrprbck1r	66	58.333	ENSPKIG00000018308	-	96	57.829	Paramormyrops_kingsleyae
ENSKMAG00000015215	shrprbck1r	100	74.550	ENSPMGG00000013254	shrprbck1r	100	74.274	Periophthalmus_magnuspinnatus
ENSKMAG00000015215	shrprbck1r	100	78.194	ENSPFOG00000004214	shrprbck1r	100	77.839	Poecilia_formosa
ENSKMAG00000015215	shrprbck1r	60	52.822	ENSPFOG00000015253	sharpin	95	53.182	Poecilia_formosa
ENSKMAG00000015215	shrprbck1r	100	77.366	ENSPLAG00000020523	shrprbck1r	100	77.978	Poecilia_latipinna
ENSKMAG00000015215	shrprbck1r	60	53.047	ENSPLAG00000000423	sharpin	95	53.409	Poecilia_latipinna
ENSKMAG00000015215	shrprbck1r	60	40.509	ENSPMEG00000023030	sharpin	89	40.972	Poecilia_mexicana
ENSKMAG00000015215	shrprbck1r	100	78.581	ENSPMEG00000006877	shrprbck1r	100	78.581	Poecilia_mexicana
ENSKMAG00000015215	shrprbck1r	60	52.584	ENSPREG00000009702	sharpin	95	53.440	Poecilia_reticulata
ENSKMAG00000015215	shrprbck1r	100	76.944	ENSPREG00000014689	shrprbck1r	100	76.944	Poecilia_reticulata
ENSKMAG00000015215	shrprbck1r	100	78.502	ENSPNYG00000022601	shrprbck1r	100	78.502	Pundamilia_nyererei
ENSKMAG00000015215	shrprbck1r	95	68.421	ENSPNAG00000007847	shrprbck1r	100	66.712	Pygocentrus_nattereri
ENSKMAG00000015215	shrprbck1r	55	55.076	ENSPNAG00000002911	sharpin	99	54.937	Pygocentrus_nattereri
ENSKMAG00000015215	shrprbck1r	75	63.755	ENSSFOG00015014150	-	96	63.755	Scleropages_formosus
ENSKMAG00000015215	shrprbck1r	63	53.106	ENSSFOG00015004028	sharpin	99	52.756	Scleropages_formosus
ENSKMAG00000015215	shrprbck1r	100	77.992	ENSSMAG00000018085	shrprbck1r	100	77.717	Scophthalmus_maximus
ENSKMAG00000015215	shrprbck1r	61	43.016	ENSSDUG00000019039	sharpin	96	42.794	Seriola_dumerili
ENSKMAG00000015215	shrprbck1r	100	80.609	ENSSDUG00000002959	shrprbck1r	100	80.828	Seriola_dumerili
ENSKMAG00000015215	shrprbck1r	100	80.194	ENSSLDG00000009026	shrprbck1r	100	80.414	Seriola_lalandi_dorsalis
ENSKMAG00000015215	shrprbck1r	96	82.302	ENSSPAG00000016097	shrprbck1r	99	82.158	Stegastes_partitus
ENSKMAG00000015215	shrprbck1r	100	75.485	ENSTRUG00000006949	shrprbck1r	100	76.316	Takifugu_rubripes
ENSKMAG00000015215	shrprbck1r	60	51.963	ENSTRUG00000011046	sharpin	96	52.425	Takifugu_rubripes
ENSKMAG00000015215	shrprbck1r	55	57.037	ENSTNIG00000008521	sharpin	94	56.543	Tetraodon_nigroviridis
ENSKMAG00000015215	shrprbck1r	100	76.806	ENSXCOG00000006701	shrprbck1r	100	76.806	Xiphophorus_couchianus
ENSKMAG00000015215	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSKMAG00000015215	shrprbck1r	60	53.425	ENSXMAG00000022076	sharpin	95	53.793	Xiphophorus_maculatus
ENSKMAG00000015215	shrprbck1r	100	76.667	ENSXMAG00000018972	shrprbck1r	100	76.667	Xiphophorus_maculatus