EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015256 (Gene tree)
Gene ID: 108237923
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 11139 bases
Position: chrLWHD01000050.1:850449-861587
Accession: 108237923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020519	RNA_pol_L_2	PF13656.6	3.1e-29	1	1
ENSKMAP00000020519	RNA_pol_L	PF01193.24	8.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020788	-	1089	XM_017419663	ENSKMAP00000020519	114 (aa)	XP_017275152	UPI0007F8D541

Gene Model

Click here to download ENSKMAG00000015256's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG
kmr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015256	polr1d	68	34.615	ENSKMAG00000014581	polr2j	52	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015256	polr1d	93	66.981	ENSG00000186184	POLR1D	91	66.981	Homo_sapiens
ENSKMAG00000015256	polr1d	89	82.353	ENSAPOG00000021882	polr1d	96	82.353	Acanthochromis_polyacanthus
ENSKMAG00000015256	polr1d	93	67.925	ENSAMEG00000019095	POLR1D	85	67.925	Ailuropoda_melanoleuca
ENSKMAG00000015256	polr1d	100	83.478	ENSACIG00000013328	polr1d	100	83.478	Amphilophus_citrinellus
ENSKMAG00000015256	polr1d	100	81.579	ENSAOCG00000018500	polr1d	100	81.579	Amphiprion_ocellaris
ENSKMAG00000015256	polr1d	100	82.456	ENSAPEG00000009489	polr1d	100	82.456	Amphiprion_percula
ENSKMAG00000015256	polr1d	100	84.211	ENSATEG00000019322	polr1d	100	84.211	Anabas_testudineus
ENSKMAG00000015256	polr1d	98	66.071	ENSACAG00000015753	POLR1D	97	66.071	Anolis_carolinensis
ENSKMAG00000015256	polr1d	93	66.981	ENSANAG00000024486	POLR1D	80	66.981	Aotus_nancymaae
ENSKMAG00000015256	polr1d	100	86.842	ENSACLG00000023805	polr1d	100	86.842	Astatotilapia_calliptera
ENSKMAG00000015256	polr1d	99	73.451	ENSAMXG00000036118	polr1d	98	73.451	Astyanax_mexicanus
ENSKMAG00000015256	polr1d	93	67.925	ENSBTAG00000033252	-	80	67.925	Bos_taurus
ENSKMAG00000015256	polr1d	93	67.925	ENSBTAG00000008642	POLR1D	80	67.925	Bos_taurus
ENSKMAG00000015256	polr1d	81	36.170	WBGene00010230	rpac-19	65	36.170	Caenorhabditis_elegans
ENSKMAG00000015256	polr1d	93	67.925	ENSCJAG00000044669	POLR1D	80	67.925	Callithrix_jacchus
ENSKMAG00000015256	polr1d	93	67.925	ENSCAFG00000006755	POLR1D	80	67.925	Canis_familiaris
ENSKMAG00000015256	polr1d	93	66.981	ENSCHIG00000021910	POLR1D	80	66.981	Capra_hircus
ENSKMAG00000015256	polr1d	93	57.407	ENSTSYG00000034852	-	89	57.407	Carlito_syrichta
ENSKMAG00000015256	polr1d	93	67.925	ENSTSYG00000026817	-	80	67.925	Carlito_syrichta
ENSKMAG00000015256	polr1d	57	58.462	ENSCAPG00000006058	-	66	58.462	Cavia_aperea
ENSKMAG00000015256	polr1d	58	57.576	ENSCPOG00000030450	-	67	57.576	Cavia_porcellus
ENSKMAG00000015256	polr1d	93	66.981	ENSCCAG00000021349	-	80	66.981	Cebus_capucinus
ENSKMAG00000015256	polr1d	87	52.525	ENSCCAG00000020191	-	82	52.525	Cebus_capucinus
ENSKMAG00000015256	polr1d	93	66.981	ENSCATG00000030710	-	80	66.981	Cercocebus_atys
ENSKMAG00000015256	polr1d	93	58.491	ENSCATG00000022900	-	79	58.491	Cercocebus_atys
ENSKMAG00000015256	polr1d	93	66.981	ENSCLAG00000017623	POLR1D	85	66.981	Chinchilla_lanigera
ENSKMAG00000015256	polr1d	89	74.257	ENSCPBG00000004719	POLR1D	100	74.257	Chrysemys_picta_bellii
ENSKMAG00000015256	polr1d	93	66.038	ENSCANG00000037694	-	80	66.038	Colobus_angolensis_palliatus
ENSKMAG00000015256	polr1d	93	66.981	ENSCANG00000028632	-	80	66.981	Colobus_angolensis_palliatus
ENSKMAG00000015256	polr1d	93	67.925	ENSCGRG00001021251	Polr1d	80	67.925	Cricetulus_griseus_chok1gshd
ENSKMAG00000015256	polr1d	93	67.925	ENSCGRG00000011639	Polr1d	80	67.925	Cricetulus_griseus_crigri
ENSKMAG00000015256	polr1d	93	83.019	ENSCSEG00000018268	polr1d	100	79.487	Cynoglossus_semilaevis
ENSKMAG00000015256	polr1d	100	85.965	ENSCVAG00000018527	polr1d	100	85.965	Cyprinodon_variegatus
ENSKMAG00000015256	polr1d	94	72.897	ENSDARG00000037570	polr1d	96	72.897	Danio_rerio
ENSKMAG00000015256	polr1d	93	65.094	ENSDNOG00000046247	-	79	65.094	Dasypus_novemcinctus
ENSKMAG00000015256	polr1d	93	66.038	ENSDNOG00000043676	-	80	66.038	Dasypus_novemcinctus
ENSKMAG00000015256	polr1d	93	67.925	ENSDORG00000029155	Polr1d	80	67.925	Dipodomys_ordii
ENSKMAG00000015256	polr1d	91	42.857	FBgn0086447	l(2)37Cg	90	42.857	Drosophila_melanogaster
ENSKMAG00000015256	polr1d	93	66.981	ENSETEG00000012797	POLR1D	85	66.981	Echinops_telfairi
ENSKMAG00000015256	polr1d	81	63.043	ENSEBUG00000011748	polr1d	64	63.043	Eptatretus_burgeri
ENSKMAG00000015256	polr1d	93	67.925	ENSEASG00005022487	POLR1D	82	67.925	Equus_asinus_asinus
ENSKMAG00000015256	polr1d	92	68.571	ENSEEUG00000013144	POLR1D	85	68.571	Erinaceus_europaeus
ENSKMAG00000015256	polr1d	92	77.143	ENSELUG00000005105	rpac2	92	77.143	Esox_lucius
ENSKMAG00000015256	polr1d	93	67.925	ENSFCAG00000030162	POLR1D	80	67.925	Felis_catus
ENSKMAG00000015256	polr1d	88	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSKMAG00000015256	polr1d	93	66.038	ENSFDAG00000004463	POLR1D	80	66.038	Fukomys_damarensis
ENSKMAG00000015256	polr1d	100	87.719	ENSFHEG00000015410	polr1d	99	87.719	Fundulus_heteroclitus
ENSKMAG00000015256	polr1d	59	67.164	ENSGALG00000007470	POLR1D	66	67.164	Gallus_gallus
ENSKMAG00000015256	polr1d	100	86.842	ENSGAFG00000001693	polr1d	100	86.842	Gambusia_affinis
ENSKMAG00000015256	polr1d	96	83.486	ENSGACG00000018585	polr1d	92	83.486	Gasterosteus_aculeatus
ENSKMAG00000015256	polr1d	100	71.930	ENSGAGG00000008503	POLR1D	100	71.930	Gopherus_agassizii
ENSKMAG00000015256	polr1d	93	66.981	ENSGGOG00000004235	POLR1D	80	66.981	Gorilla_gorilla
ENSKMAG00000015256	polr1d	100	86.842	ENSHBUG00000002111	polr1d	100	86.842	Haplochromis_burtoni
ENSKMAG00000015256	polr1d	93	65.094	ENSHGLG00000003202	POLR1D	80	65.094	Heterocephalus_glaber_female
ENSKMAG00000015256	polr1d	93	65.094	ENSHGLG00100009393	POLR1D	80	65.094	Heterocephalus_glaber_male
ENSKMAG00000015256	polr1d	100	78.947	ENSHCOG00000003258	polr1d	100	78.947	Hippocampus_comes
ENSKMAG00000015256	polr1d	97	75.676	ENSIPUG00000014810	polr1d	97	75.676	Ictalurus_punctatus
ENSKMAG00000015256	polr1d	93	66.981	ENSSTOG00000013877	POLR1D	80	66.981	Ictidomys_tridecemlineatus
ENSKMAG00000015256	polr1d	93	66.981	ENSJJAG00000022671	-	88	66.981	Jaculus_jaculus
ENSKMAG00000015256	polr1d	93	50.943	ENSJJAG00000021667	-	62	50.943	Jaculus_jaculus
ENSKMAG00000015256	polr1d	100	83.333	ENSLBEG00000015919	polr1d	100	83.333	Labrus_bergylta
ENSKMAG00000015256	polr1d	93	68.224	ENSLACG00000006810	POLR1D	89	68.224	Latimeria_chalumnae
ENSKMAG00000015256	polr1d	61	81.159	ENSLOCG00000014976	polr1d	93	81.159	Lepisosteus_oculatus
ENSKMAG00000015256	polr1d	93	66.981	ENSLAFG00000032290	POLR1D	80	66.981	Loxodonta_africana
ENSKMAG00000015256	polr1d	93	66.981	ENSMFAG00000045264	POLR1D	82	66.981	Macaca_fascicularis
ENSKMAG00000015256	polr1d	93	66.981	ENSMMUG00000020386	POLR1D	91	66.981	Macaca_mulatta
ENSKMAG00000015256	polr1d	71	65.432	ENSMMUG00000041570	-	73	65.432	Macaca_mulatta
ENSKMAG00000015256	polr1d	93	66.981	ENSMNEG00000008630	-	80	66.981	Macaca_nemestrina
ENSKMAG00000015256	polr1d	82	58.511	ENSMNEG00000038120	-	73	58.511	Macaca_nemestrina
ENSKMAG00000015256	polr1d	93	66.981	ENSMLEG00000041048	-	80	66.981	Mandrillus_leucophaeus
ENSKMAG00000015256	polr1d	93	57.547	ENSMLEG00000032251	-	79	57.547	Mandrillus_leucophaeus
ENSKMAG00000015256	polr1d	89	83.333	ENSMAMG00000014834	polr1d	95	83.333	Mastacembelus_armatus
ENSKMAG00000015256	polr1d	89	83.333	ENSMZEG00005006638	polr1d	90	83.333	Maylandia_zebra
ENSKMAG00000015256	polr1d	81	80.435	ENSMGAG00000005322	POLR1D	84	80.435	Meleagris_gallopavo
ENSKMAG00000015256	polr1d	93	67.925	ENSMAUG00000001946	Polr1d	80	67.925	Mesocricetus_auratus
ENSKMAG00000015256	polr1d	97	50.450	ENSMICG00000007349	-	83	50.450	Microcebus_murinus
ENSKMAG00000015256	polr1d	93	66.038	ENSMICG00000016883	-	80	66.038	Microcebus_murinus
ENSKMAG00000015256	polr1d	93	66.981	ENSMOCG00000021288	Polr1d	80	66.981	Microtus_ochrogaster
ENSKMAG00000015256	polr1d	100	88.596	ENSMMOG00000009605	polr1d	100	88.596	Mola_mola
ENSKMAG00000015256	polr1d	100	69.298	ENSMODG00000023881	POLR1D	100	69.298	Monodelphis_domestica
ENSKMAG00000015256	polr1d	100	82.456	ENSMALG00000010652	polr1d	100	82.456	Monopterus_albus
ENSKMAG00000015256	polr1d	90	67.961	MGP_CAROLIEiJ_G0028034	Polr1d	77	67.961	Mus_caroli
ENSKMAG00000015256	polr1d	97	63.964	ENSMUSG00000029642	Polr1d	83	63.964	Mus_musculus
ENSKMAG00000015256	polr1d	93	66.038	MGP_PahariEiJ_G0024600	Polr1d	80	66.038	Mus_pahari
ENSKMAG00000015256	polr1d	97	63.063	MGP_SPRETEiJ_G0029032	Polr1d	83	63.063	Mus_spretus
ENSKMAG00000015256	polr1d	93	61.321	ENSMLUG00000004118	-	80	61.321	Myotis_lucifugus
ENSKMAG00000015256	polr1d	93	66.981	ENSMLUG00000027169	-	80	66.981	Myotis_lucifugus
ENSKMAG00000015256	polr1d	94	67.290	ENSNGAG00000006014	Polr1d	92	67.290	Nannospalax_galili
ENSKMAG00000015256	polr1d	100	86.842	ENSNBRG00000020327	polr1d	100	86.842	Neolamprologus_brichardi
ENSKMAG00000015256	polr1d	93	66.981	ENSNLEG00000000358	POLR1D	80	66.981	Nomascus_leucogenys
ENSKMAG00000015256	polr1d	92	67.619	ENSODEG00000005294	-	79	67.619	Octodon_degus
ENSKMAG00000015256	polr1d	92	58.095	ENSODEG00000014801	-	76	58.095	Octodon_degus
ENSKMAG00000015256	polr1d	93	75.472	ENSOANG00000008708	-	98	75.472	Ornithorhynchus_anatinus
ENSKMAG00000015256	polr1d	93	66.981	ENSOCUG00000015706	POLR1D	65	66.981	Oryctolagus_cuniculus
ENSKMAG00000015256	polr1d	100	84.211	ENSORLG00000010257	polr1d	100	84.211	Oryzias_latipes
ENSKMAG00000015256	polr1d	100	84.211	ENSORLG00020000533	polr1d	77	84.211	Oryzias_latipes_hni
ENSKMAG00000015256	polr1d	100	85.088	ENSORLG00015013267	polr1d	75	85.088	Oryzias_latipes_hsok
ENSKMAG00000015256	polr1d	100	84.211	ENSOMEG00000014912	polr1d	76	84.211	Oryzias_melastigma
ENSKMAG00000015256	polr1d	93	67.925	ENSOGAG00000014601	POLR1D	80	67.925	Otolemur_garnettii
ENSKMAG00000015256	polr1d	93	66.981	ENSOARG00000017005	POLR1D	82	66.981	Ovis_aries
ENSKMAG00000015256	polr1d	93	66.981	ENSPPAG00000028138	POLR1D	80	66.981	Pan_paniscus
ENSKMAG00000015256	polr1d	93	67.925	ENSPPRG00000003381	POLR1D	80	67.925	Panthera_pardus
ENSKMAG00000015256	polr1d	93	67.925	ENSPTIG00000018137	POLR1D	80	67.925	Panthera_tigris_altaica
ENSKMAG00000015256	polr1d	93	66.981	ENSPTRG00000005734	POLR1D	80	66.981	Pan_troglodytes
ENSKMAG00000015256	polr1d	93	57.547	ENSPANG00000035051	-	79	57.547	Papio_anubis
ENSKMAG00000015256	polr1d	93	66.981	ENSPANG00000020259	-	80	66.981	Papio_anubis
ENSKMAG00000015256	polr1d	85	80.412	ENSPKIG00000021891	polr1d	94	59.664	Paramormyrops_kingsleyae
ENSKMAG00000015256	polr1d	100	72.807	ENSPSIG00000011822	POLR1D	88	72.807	Pelodiscus_sinensis
ENSKMAG00000015256	polr1d	100	71.930	ENSPMGG00000012998	POLR1D	84	71.930	Periophthalmus_magnuspinnatus
ENSKMAG00000015256	polr1d	100	79.825	ENSPMGG00000010359	polr1d	99	79.825	Periophthalmus_magnuspinnatus
ENSKMAG00000015256	polr1d	93	66.981	ENSPEMG00000006336	-	82	66.981	Peromyscus_maniculatus_bairdii
ENSKMAG00000015256	polr1d	89	59.406	ENSPMAG00000004228	polr1d	85	59.406	Petromyzon_marinus
ENSKMAG00000015256	polr1d	100	69.298	ENSPCIG00000001673	POLR1D	100	69.298	Phascolarctos_cinereus
ENSKMAG00000015256	polr1d	100	87.719	ENSPFOG00000023343	polr1d	100	90.805	Poecilia_formosa
ENSKMAG00000015256	polr1d	100	87.719	ENSPLAG00000009675	polr1d	100	87.719	Poecilia_latipinna
ENSKMAG00000015256	polr1d	100	87.719	ENSPMEG00000004628	polr1d	100	87.719	Poecilia_mexicana
ENSKMAG00000015256	polr1d	100	87.719	ENSPREG00000022032	polr1d	100	87.719	Poecilia_reticulata
ENSKMAG00000015256	polr1d	93	65.094	ENSPCOG00000028175	POLR1D	80	65.094	Propithecus_coquereli
ENSKMAG00000015256	polr1d	100	86.842	ENSPNYG00000000107	polr1d	100	86.842	Pundamilia_nyererei
ENSKMAG00000015256	polr1d	96	73.394	ENSPNAG00000001512	polr1d	92	72.727	Pygocentrus_nattereri
ENSKMAG00000015256	polr1d	93	66.981	ENSRBIG00000036378	-	80	66.981	Rhinopithecus_bieti
ENSKMAG00000015256	polr1d	93	64.151	ENSRBIG00000000336	-	80	64.151	Rhinopithecus_bieti
ENSKMAG00000015256	polr1d	93	66.981	ENSRROG00000042232	-	80	66.981	Rhinopithecus_roxellana
ENSKMAG00000015256	polr1d	93	65.094	ENSRROG00000026751	-	80	65.094	Rhinopithecus_roxellana
ENSKMAG00000015256	polr1d	79	52.222	YNL113W	RPC19	70	50.000	Saccharomyces_cerevisiae
ENSKMAG00000015256	polr1d	86	67.347	ENSSBOG00000030146	-	72	67.347	Saimiri_boliviensis_boliviensis
ENSKMAG00000015256	polr1d	93	66.981	ENSSBOG00000028482	-	80	66.981	Saimiri_boliviensis_boliviensis
ENSKMAG00000015256	polr1d	97	68.468	ENSSHAG00000001190	POLR1D	86	68.468	Sarcophilus_harrisii
ENSKMAG00000015256	polr1d	95	80.556	ENSSFOG00015011375	polr1d	94	80.556	Scleropages_formosus
ENSKMAG00000015256	polr1d	100	85.088	ENSSMAG00000011861	polr1d	100	85.088	Scophthalmus_maximus
ENSKMAG00000015256	polr1d	100	85.088	ENSSDUG00000011930	polr1d	100	85.088	Seriola_dumerili
ENSKMAG00000015256	polr1d	99	75.439	ENSSLDG00000023871	polr1d	97	75.439	Seriola_lalandi_dorsalis
ENSKMAG00000015256	polr1d	93	67.925	ENSSARG00000007840	POLR1D	80	67.925	Sorex_araneus
ENSKMAG00000015256	polr1d	91	73.077	ENSSPUG00000005786	POLR1D	100	68.376	Sphenodon_punctatus
ENSKMAG00000015256	polr1d	100	83.333	ENSSPAG00000011764	polr1d	100	83.333	Stegastes_partitus
ENSKMAG00000015256	polr1d	93	66.038	ENSSSCG00000009310	POLR1D	80	66.038	Sus_scrofa
ENSKMAG00000015256	polr1d	84	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSKMAG00000015256	polr1d	100	82.456	ENSTRUG00000019741	polr1d	100	82.456	Takifugu_rubripes
ENSKMAG00000015256	polr1d	97	64.865	ENSTBEG00000007006	POLR1D	90	64.865	Tupaia_belangeri
ENSKMAG00000015256	polr1d	93	67.925	ENSUAMG00000011413	POLR1D	80	67.925	Ursus_americanus
ENSKMAG00000015256	polr1d	93	67.925	ENSUMAG00000016968	POLR1D	83	67.925	Ursus_maritimus
ENSKMAG00000015256	polr1d	93	67.925	ENSVVUG00000009216	POLR1D	80	67.925	Vulpes_vulpes
ENSKMAG00000015256	polr1d	89	87.129	ENSXCOG00000011731	polr1d	78	87.129	Xiphophorus_couchianus
ENSKMAG00000015256	polr1d	89	87.129	ENSXMAG00000017538	polr1d	78	87.129	Xiphophorus_maculatus