EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000015287 (Gene tree)
Gene ID: 108249481
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 16854 bases
Position: chrLWHD01000455.1:200107-216960
Accession: 108249481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020575	RRM_1	PF00076.22	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000020844	-	1995	XM_017438891	ENSKMAP00000020575	366 (aa)	XP_017294380	-

Gene Model

Click here to download ENSKMAG00000015287's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015287's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015287	rbm42	99	79.245	ENSAPOG00000015109	rbm42	91	78.167	Acanthochromis_polyacanthus
ENSKMAG00000015287	rbm42	99	75.202	ENSACIG00000010771	rbm42	91	75.741	Amphilophus_citrinellus
ENSKMAG00000015287	rbm42	99	80.323	ENSAOCG00000008873	rbm42	91	78.437	Amphiprion_ocellaris
ENSKMAG00000015287	rbm42	99	80.323	ENSAPEG00000012051	rbm42	90	78.437	Amphiprion_percula
ENSKMAG00000015287	rbm42	99	79.133	ENSATEG00000000536	rbm42	91	78.862	Anabas_testudineus
ENSKMAG00000015287	rbm42	99	79.784	ENSACLG00000004988	rbm42	91	79.784	Astatotilapia_calliptera
ENSKMAG00000015287	rbm42	100	63.636	ENSAMXG00000016545	rbm42	91	68.063	Astyanax_mexicanus
ENSKMAG00000015287	rbm42	96	76.584	ENSCSEG00000010248	rbm42	91	76.584	Cynoglossus_semilaevis
ENSKMAG00000015287	rbm42	99	80.429	ENSCVAG00000015589	rbm42	91	81.233	Cyprinodon_variegatus
ENSKMAG00000015287	rbm42	99	63.731	ENSDARG00000039910	rbm42	91	65.873	Danio_rerio
ENSKMAG00000015287	rbm42	99	65.803	ENSELUG00000022403	rbm42	91	67.442	Esox_lucius
ENSKMAG00000015287	rbm42	69	78.327	ENSFHEG00000006764	rbm42	78	80.258	Fundulus_heteroclitus
ENSKMAG00000015287	rbm42	99	66.129	ENSGMOG00000012660	rbm42	91	66.935	Gadus_morhua
ENSKMAG00000015287	rbm42	74	76.727	ENSGAFG00000009059	rbm42	88	80.000	Gambusia_affinis
ENSKMAG00000015287	rbm42	99	74.933	ENSGACG00000004170	rbm42	91	74.663	Gasterosteus_aculeatus
ENSKMAG00000015287	rbm42	99	79.784	ENSHBUG00000011141	rbm42	91	79.784	Haplochromis_burtoni
ENSKMAG00000015287	rbm42	99	73.458	ENSHCOG00000021214	rbm42	91	74.194	Hippocampus_comes
ENSKMAG00000015287	rbm42	100	62.469	ENSIPUG00000022365	rbm42	91	65.803	Ictalurus_punctatus
ENSKMAG00000015287	rbm42	83	73.077	ENSLBEG00000004578	-	85	75.000	Labrus_bergylta
ENSKMAG00000015287	rbm42	99	73.529	ENSLBEG00000017547	rbm42	91	75.668	Labrus_bergylta
ENSKMAG00000015287	rbm42	99	61.917	ENSLOCG00000003368	rbm42	91	62.435	Lepisosteus_oculatus
ENSKMAG00000015287	rbm42	99	80.000	ENSMAMG00000006708	rbm42	91	78.919	Mastacembelus_armatus
ENSKMAG00000015287	rbm42	99	79.784	ENSMZEG00005025234	rbm42	91	79.784	Maylandia_zebra
ENSKMAG00000015287	rbm42	90	78.507	ENSMALG00000015720	rbm42	90	76.716	Monopterus_albus
ENSKMAG00000015287	rbm42	99	80.214	ENSONIG00000008029	rbm42	91	80.214	Oreochromis_niloticus
ENSKMAG00000015287	rbm42	99	58.505	ENSORLG00020022507	rbm42	90	59.424	Oryzias_latipes_hni
ENSKMAG00000015287	rbm42	99	79.133	ENSORLG00015000659	rbm42	91	79.404	Oryzias_latipes_hsok
ENSKMAG00000015287	rbm42	52	84.293	ENSOMEG00000014332	rbm42	72	85.340	Oryzias_melastigma
ENSKMAG00000015287	rbm42	99	67.105	ENSPKIG00000015165	rbm42	94	67.192	Paramormyrops_kingsleyae
ENSKMAG00000015287	rbm42	85	68.718	ENSPMGG00000003569	rbm42	71	97.059	Periophthalmus_magnuspinnatus
ENSKMAG00000015287	rbm42	51	57.143	ENSPMAG00000008633	rbm42	88	47.892	Petromyzon_marinus
ENSKMAG00000015287	rbm42	99	78.862	ENSPFOG00000007701	rbm42	91	81.030	Poecilia_formosa
ENSKMAG00000015287	rbm42	99	78.862	ENSPLAG00000009405	rbm42	91	80.759	Poecilia_latipinna
ENSKMAG00000015287	rbm42	99	78.495	ENSPMEG00000010375	rbm42	91	81.030	Poecilia_mexicana
ENSKMAG00000015287	rbm42	99	78.862	ENSPREG00000018102	rbm42	91	81.030	Poecilia_reticulata
ENSKMAG00000015287	rbm42	99	79.515	ENSPNYG00000014460	rbm42	91	79.515	Pundamilia_nyererei
ENSKMAG00000015287	rbm42	99	62.750	ENSPNAG00000009961	rbm42	91	67.792	Pygocentrus_nattereri
ENSKMAG00000015287	rbm42	99	64.796	ENSSFOG00015019227	rbm42	91	66.927	Scleropages_formosus
ENSKMAG00000015287	rbm42	99	78.495	ENSSMAG00000011935	rbm42	91	77.957	Scophthalmus_maximus
ENSKMAG00000015287	rbm42	99	79.784	ENSSDUG00000004033	rbm42	91	78.706	Seriola_dumerili
ENSKMAG00000015287	rbm42	99	68.194	ENSSLDG00000009918	rbm42	76	97.143	Seriola_lalandi_dorsalis
ENSKMAG00000015287	rbm42	99	80.054	ENSSPAG00000019871	rbm42	91	80.323	Stegastes_partitus
ENSKMAG00000015287	rbm42	99	71.816	ENSTRUG00000024586	-	69	71.816	Takifugu_rubripes
ENSKMAG00000015287	rbm42	99	64.912	ENSTNIG00000011669	rbm42	91	63.433	Tetraodon_nigroviridis
ENSKMAG00000015287	rbm42	99	54.897	ENSXETG00000017599	rbm42	91	51.562	Xenopus_tropicalis
ENSKMAG00000015287	rbm42	99	77.957	ENSXMAG00000012827	rbm42	91	80.108	Xiphophorus_maculatus