EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015290 (Gene tree)
Gene ID: 108249262
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 23110 bases
Position: chrLWHD01000005.1:5245665-5268774
Accession: 108249262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000020781	RNA_pol_Rpb1_5	PF04998.17	2.1e-88	1	1
ENSKMAP00000020725	RNA_pol_Rpb1_5	PF04998.17	2.4e-88	1	1
ENSKMAP00000020825	RNA_pol_Rpb1_5	PF04998.17	2.4e-88	1	1
ENSKMAP00000020825	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSKMAP00000020725	RNA_pol_Rpb1_4	PF05000.17	1.2e-31	1	1
ENSKMAP00000020781	RNA_pol_Rpb1_4	PF05000.17	1.3e-31	1	1
ENSKMAP00000020825	RNA_pol_Rpb1_2	PF00623.20	3.2e-73	1	1
ENSKMAP00000020781	RNA_pol_Rpb1_2	PF00623.20	3.3e-73	1	1
ENSKMAP00000020725	RNA_pol_Rpb1_2	PF00623.20	3.3e-73	1	1
ENSKMAP00000020825	RNA_pol_Rpb1_3	PF04983.18	5.2e-41	1	1
ENSKMAP00000020781	RNA_pol_Rpb1_3	PF04983.18	5.2e-41	1	1
ENSKMAP00000020725	RNA_pol_Rpb1_3	PF04983.18	5.4e-41	1	1
ENSKMAP00000020825	RNA_pol_Rpb1_1	PF04997.12	1.9e-92	1	1
ENSKMAP00000020725	RNA_pol_Rpb1_1	PF04997.12	2e-92	1	1
ENSKMAP00000020781	RNA_pol_Rpb1_1	PF04997.12	2.2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000021055	-	5348	XM_017438547	ENSKMAP00000020781	1390 (aa)	XP_017294036	UPI0007F893EB
ENSKMAT00000021099	-	5291	-	ENSKMAP00000020825	1371 (aa)	-	-
ENSKMAT00000020995	-	5384	XM_017438538	ENSKMAP00000020725	1402 (aa)	XP_017294027	UPI0007F91FE0

Gene Model

Click here to download ENSKMAG00000015290's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG
kmr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015290	polr3a	96	36.884	ENSKMAG00000016343	polr2a	73	36.481
ENSKMAG00000015290	polr3a	78	32.826	ENSKMAG00000007399	polr1a	70	32.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015290	polr3a	100	89.784	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSKMAG00000015290	polr3a	63	92.451	ENSAPOG00000022727	polr3a	99	92.451	Acanthochromis_polyacanthus
ENSKMAG00000015290	polr3a	100	89.519	ENSAMEG00000017801	POLR3A	100	89.519	Ailuropoda_melanoleuca
ENSKMAG00000015290	polr3a	94	95.923	ENSACIG00000024504	polr3a	97	95.923	Amphilophus_citrinellus
ENSKMAG00000015290	polr3a	100	92.158	ENSAOCG00000003949	-	100	92.158	Amphiprion_ocellaris
ENSKMAG00000015290	polr3a	100	95.540	ENSAOCG00000002071	polr3a	100	95.540	Amphiprion_ocellaris
ENSKMAG00000015290	polr3a	100	95.540	ENSAPEG00000013351	polr3a	100	95.540	Amphiprion_percula
ENSKMAG00000015290	polr3a	100	95.396	ENSAPEG00000001966	-	100	95.396	Amphiprion_percula
ENSKMAG00000015290	polr3a	100	95.108	ENSATEG00000023277	polr3a	100	95.108	Anabas_testudineus
ENSKMAG00000015290	polr3a	99	90.109	ENSAPLG00000015878	POLR3A	99	90.109	Anas_platyrhynchos
ENSKMAG00000015290	polr3a	93	89.534	ENSACAG00000007985	POLR3A	99	89.534	Anolis_carolinensis
ENSKMAG00000015290	polr3a	100	87.356	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSKMAG00000015290	polr3a	100	95.540	ENSACLG00000005914	polr3a	100	95.540	Astatotilapia_calliptera
ENSKMAG00000015290	polr3a	100	89.137	ENSAMXG00000018852	polr3a	100	89.137	Astyanax_mexicanus
ENSKMAG00000015290	polr3a	100	89.856	ENSBTAG00000013259	POLR3A	100	89.856	Bos_taurus
ENSKMAG00000015290	polr3a	98	56.681	WBGene00004411	rpc-1	99	56.537	Caenorhabditis_elegans
ENSKMAG00000015290	polr3a	100	89.784	ENSCJAG00000001015	POLR3A	100	89.784	Callithrix_jacchus
ENSKMAG00000015290	polr3a	100	89.712	ENSCAFG00000015546	POLR3A	100	89.712	Canis_familiaris
ENSKMAG00000015290	polr3a	100	89.712	ENSCAFG00020014711	POLR3A	100	89.712	Canis_lupus_dingo
ENSKMAG00000015290	polr3a	100	89.496	ENSCHIG00000000352	POLR3A	100	89.496	Capra_hircus
ENSKMAG00000015290	polr3a	100	89.209	ENSTSYG00000006671	POLR3A	100	89.209	Carlito_syrichta
ENSKMAG00000015290	polr3a	99	89.745	ENSCAPG00000016031	POLR3A	100	89.745	Cavia_aperea
ENSKMAG00000015290	polr3a	100	89.784	ENSCPOG00000022387	POLR3A	100	89.784	Cavia_porcellus
ENSKMAG00000015290	polr3a	100	88.489	ENSCCAG00000032995	POLR3A	100	88.489	Cebus_capucinus
ENSKMAG00000015290	polr3a	100	89.784	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSKMAG00000015290	polr3a	100	89.784	ENSCLAG00000009629	POLR3A	100	89.784	Chinchilla_lanigera
ENSKMAG00000015290	polr3a	100	89.784	ENSCSAG00000009292	POLR3A	100	89.784	Chlorocebus_sabaeus
ENSKMAG00000015290	polr3a	81	81.602	ENSCHOG00000008368	POLR3A	100	75.422	Choloepus_hoffmanni
ENSKMAG00000015290	polr3a	99	90.137	ENSCPBG00000002079	POLR3A	99	90.137	Chrysemys_picta_bellii
ENSKMAG00000015290	polr3a	99	68.948	ENSCSAVG00000009925	-	99	68.948	Ciona_savignyi
ENSKMAG00000015290	polr3a	86	85.643	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSKMAG00000015290	polr3a	79	90.635	ENSCGRG00001015599	-	92	90.635	Cricetulus_griseus_chok1gshd
ENSKMAG00000015290	polr3a	90	88.019	ENSCGRG00000001019	Polr3a	100	89.052	Cricetulus_griseus_crigri
ENSKMAG00000015290	polr3a	100	94.748	ENSCSEG00000016653	polr3a	100	94.748	Cynoglossus_semilaevis
ENSKMAG00000015290	polr3a	100	95.468	ENSCVAG00000023049	polr3a	100	95.468	Cyprinodon_variegatus
ENSKMAG00000015290	polr3a	99	92.075	ENSDARG00000102569	polr3a	99	92.075	Danio_rerio
ENSKMAG00000015290	polr3a	100	89.065	ENSDNOG00000010194	POLR3A	100	89.065	Dasypus_novemcinctus
ENSKMAG00000015290	polr3a	100	89.784	ENSDORG00000000184	Polr3a	100	89.784	Dipodomys_ordii
ENSKMAG00000015290	polr3a	99	57.061	FBgn0030687	CG17209	99	57.061	Drosophila_melanogaster
ENSKMAG00000015290	polr3a	90	88.664	ENSETEG00000007477	POLR3A	89	88.664	Echinops_telfairi
ENSKMAG00000015290	polr3a	60	75.293	ENSEBUG00000013761	polr3a	98	75.293	Eptatretus_burgeri
ENSKMAG00000015290	polr3a	100	89.856	ENSEASG00005023053	POLR3A	100	89.856	Equus_asinus_asinus
ENSKMAG00000015290	polr3a	97	89.866	ENSECAG00000019416	POLR3A	100	89.798	Equus_caballus
ENSKMAG00000015290	polr3a	97	84.775	ENSEEUG00000001774	POLR3A	100	85.533	Erinaceus_europaeus
ENSKMAG00000015290	polr3a	100	90.739	ENSELUG00000014016	polr3a	100	90.739	Esox_lucius
ENSKMAG00000015290	polr3a	100	89.856	ENSFCAG00000000843	POLR3A	100	89.856	Felis_catus
ENSKMAG00000015290	polr3a	100	89.935	ENSFALG00000006913	POLR3A	100	89.935	Ficedula_albicollis
ENSKMAG00000015290	polr3a	100	89.784	ENSFDAG00000007813	POLR3A	100	89.784	Fukomys_damarensis
ENSKMAG00000015290	polr3a	95	95.395	ENSFHEG00000011922	polr3a	99	95.395	Fundulus_heteroclitus
ENSKMAG00000015290	polr3a	100	88.040	ENSGMOG00000000291	polr3a	99	88.040	Gadus_morhua
ENSKMAG00000015290	polr3a	100	90.216	ENSGALG00000004947	POLR3A	100	90.216	Gallus_gallus
ENSKMAG00000015290	polr3a	100	95.540	ENSGAFG00000005112	polr3a	100	95.540	Gambusia_affinis
ENSKMAG00000015290	polr3a	100	94.101	ENSGACG00000002304	polr3a	100	94.101	Gasterosteus_aculeatus
ENSKMAG00000015290	polr3a	95	90.008	ENSGAGG00000010386	POLR3A	98	90.008	Gopherus_agassizii
ENSKMAG00000015290	polr3a	99	88.656	ENSGGOG00000027729	POLR3A	98	92.405	Gorilla_gorilla
ENSKMAG00000015290	polr3a	100	95.540	ENSHBUG00000018098	polr3a	100	95.540	Haplochromis_burtoni
ENSKMAG00000015290	polr3a	100	89.712	ENSHGLG00000017899	POLR3A	100	89.712	Heterocephalus_glaber_female
ENSKMAG00000015290	polr3a	100	89.712	ENSHGLG00100008483	POLR3A	100	89.712	Heterocephalus_glaber_male
ENSKMAG00000015290	polr3a	100	94.101	ENSHCOG00000001075	polr3a	100	94.101	Hippocampus_comes
ENSKMAG00000015290	polr3a	100	89.856	ENSSTOG00000012983	POLR3A	100	89.856	Ictidomys_tridecemlineatus
ENSKMAG00000015290	polr3a	99	93.449	ENSLBEG00000017214	polr3a	99	93.449	Labrus_bergylta
ENSKMAG00000015290	polr3a	97	88.104	ENSLACG00000018557	POLR3A	99	88.104	Latimeria_chalumnae
ENSKMAG00000015290	polr3a	100	92.319	ENSLOCG00000004942	polr3a	100	92.319	Lepisosteus_oculatus
ENSKMAG00000015290	polr3a	100	88.569	ENSLAFG00000016719	POLR3A	100	88.569	Loxodonta_africana
ENSKMAG00000015290	polr3a	100	89.712	ENSMFAG00000032218	POLR3A	100	89.712	Macaca_fascicularis
ENSKMAG00000015290	polr3a	100	89.712	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSKMAG00000015290	polr3a	99	83.488	ENSMNEG00000035163	POLR3A	99	89.502	Macaca_nemestrina
ENSKMAG00000015290	polr3a	100	86.043	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSKMAG00000015290	polr3a	100	95.252	ENSMAMG00000017497	polr3a	100	95.252	Mastacembelus_armatus
ENSKMAG00000015290	polr3a	100	95.540	ENSMZEG00005000576	polr3a	100	95.540	Maylandia_zebra
ENSKMAG00000015290	polr3a	100	72.727	ENSMGAG00000005713	-	100	72.727	Meleagris_gallopavo
ENSKMAG00000015290	polr3a	100	87.842	ENSMAUG00000016247	Polr3a	100	87.842	Mesocricetus_auratus
ENSKMAG00000015290	polr3a	100	89.784	ENSMICG00000005937	POLR3A	100	90.877	Microcebus_murinus
ENSKMAG00000015290	polr3a	100	89.856	ENSMOCG00000012185	Polr3a	100	89.856	Microtus_ochrogaster
ENSKMAG00000015290	polr3a	100	94.676	ENSMMOG00000013822	polr3a	100	94.676	Mola_mola
ENSKMAG00000015290	polr3a	100	89.424	ENSMODG00000001036	POLR3A	100	89.424	Monodelphis_domestica
ENSKMAG00000015290	polr3a	100	94.892	ENSMALG00000001249	polr3a	100	94.892	Monopterus_albus
ENSKMAG00000015290	polr3a	100	89.784	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.784	Mus_caroli
ENSKMAG00000015290	polr3a	100	89.856	ENSMUSG00000025280	Polr3a	100	89.856	Mus_musculus
ENSKMAG00000015290	polr3a	100	89.784	MGP_PahariEiJ_G0030029	Polr3a	100	89.784	Mus_pahari
ENSKMAG00000015290	polr3a	100	87.194	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSKMAG00000015290	polr3a	100	89.658	ENSMPUG00000003790	POLR3A	100	89.658	Mustela_putorius_furo
ENSKMAG00000015290	polr3a	100	88.705	ENSMLUG00000011522	POLR3A	100	88.705	Myotis_lucifugus
ENSKMAG00000015290	polr3a	100	88.345	ENSNGAG00000015863	Polr3a	100	88.345	Nannospalax_galili
ENSKMAG00000015290	polr3a	100	93.669	ENSNBRG00000014262	polr3a	100	93.669	Neolamprologus_brichardi
ENSKMAG00000015290	polr3a	90	83.635	ENSNLEG00000010501	POLR3A	91	83.721	Nomascus_leucogenys
ENSKMAG00000015290	polr3a	99	76.945	ENSMEUG00000012446	POLR3A	100	76.945	Notamacropus_eugenii
ENSKMAG00000015290	polr3a	100	85.252	ENSOPRG00000001880	-	100	85.252	Ochotona_princeps
ENSKMAG00000015290	polr3a	100	89.424	ENSODEG00000015146	POLR3A	100	89.424	Octodon_degus
ENSKMAG00000015290	polr3a	100	95.827	ENSONIG00000016129	polr3a	100	95.827	Oreochromis_niloticus
ENSKMAG00000015290	polr3a	99	88.125	ENSOANG00000007013	POLR3A	100	88.897	Ornithorhynchus_anatinus
ENSKMAG00000015290	polr3a	100	89.568	ENSOCUG00000012450	POLR3A	100	89.568	Oryctolagus_cuniculus
ENSKMAG00000015290	polr3a	100	95.221	ENSORLG00000008958	polr3a	100	95.221	Oryzias_latipes
ENSKMAG00000015290	polr3a	100	92.806	ENSORLG00020007525	polr3a	98	95.421	Oryzias_latipes_hni
ENSKMAG00000015290	polr3a	100	95.221	ENSORLG00015006633	polr3a	100	95.221	Oryzias_latipes_hsok
ENSKMAG00000015290	polr3a	100	94.964	ENSOMEG00000012865	polr3a	100	94.964	Oryzias_melastigma
ENSKMAG00000015290	polr3a	100	89.712	ENSOGAG00000010995	POLR3A	100	89.712	Otolemur_garnettii
ENSKMAG00000015290	polr3a	100	89.440	ENSOARG00000009656	POLR3A	100	89.440	Ovis_aries
ENSKMAG00000015290	polr3a	100	89.856	ENSPPRG00000002128	POLR3A	100	89.856	Panthera_pardus
ENSKMAG00000015290	polr3a	100	89.856	ENSPTIG00000020916	POLR3A	100	89.856	Panthera_tigris_altaica
ENSKMAG00000015290	polr3a	100	89.856	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSKMAG00000015290	polr3a	100	89.712	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSKMAG00000015290	polr3a	100	92.014	ENSPKIG00000008140	polr3a	100	92.014	Paramormyrops_kingsleyae
ENSKMAG00000015290	polr3a	99	89.138	ENSPSIG00000002092	POLR3A	100	89.920	Pelodiscus_sinensis
ENSKMAG00000015290	polr3a	100	89.568	ENSPEMG00000006768	Polr3a	100	89.568	Peromyscus_maniculatus_bairdii
ENSKMAG00000015290	polr3a	100	89.353	ENSPCIG00000015842	POLR3A	100	89.353	Phascolarctos_cinereus
ENSKMAG00000015290	polr3a	54	96.644	ENSPFOG00000006458	polr3a	100	96.644	Poecilia_formosa
ENSKMAG00000015290	polr3a	100	95.755	ENSPLAG00000000997	polr3a	100	95.755	Poecilia_latipinna
ENSKMAG00000015290	polr3a	100	95.683	ENSPMEG00000006821	polr3a	100	95.683	Poecilia_mexicana
ENSKMAG00000015290	polr3a	100	95.683	ENSPREG00000002385	polr3a	100	95.683	Poecilia_reticulata
ENSKMAG00000015290	polr3a	93	89.698	ENSPPYG00000002305	POLR3A	99	89.698	Pongo_abelii
ENSKMAG00000015290	polr3a	85	78.626	ENSPCAG00000005690	POLR3A	87	78.626	Procavia_capensis
ENSKMAG00000015290	polr3a	100	89.784	ENSPCOG00000028311	POLR3A	100	89.784	Propithecus_coquereli
ENSKMAG00000015290	polr3a	100	88.273	ENSPVAG00000015553	POLR3A	100	88.273	Pteropus_vampyrus
ENSKMAG00000015290	polr3a	100	95.468	ENSPNYG00000020987	polr3a	100	95.468	Pundamilia_nyererei
ENSKMAG00000015290	polr3a	99	88.617	ENSPNAG00000006629	polr3a	99	88.617	Pygocentrus_nattereri
ENSKMAG00000015290	polr3a	100	89.712	ENSRNOG00000010008	Polr3a	100	89.712	Rattus_norvegicus
ENSKMAG00000015290	polr3a	100	86.115	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSKMAG00000015290	polr3a	100	89.712	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSKMAG00000015290	polr3a	98	50.105	YOR116C	RPO31	98	50.105	Saccharomyces_cerevisiae
ENSKMAG00000015290	polr3a	100	89.856	ENSSBOG00000022199	POLR3A	100	89.856	Saimiri_boliviensis_boliviensis
ENSKMAG00000015290	polr3a	100	89.281	ENSSHAG00000007588	POLR3A	94	89.281	Sarcophilus_harrisii
ENSKMAG00000015290	polr3a	100	93.453	ENSSFOG00015014357	polr3a	100	93.453	Scleropages_formosus
ENSKMAG00000015290	polr3a	100	95.108	ENSSMAG00000001780	polr3a	100	95.108	Scophthalmus_maximus
ENSKMAG00000015290	polr3a	100	95.683	ENSSDUG00000019840	polr3a	100	95.683	Seriola_dumerili
ENSKMAG00000015290	polr3a	100	95.827	ENSSLDG00000023908	polr3a	100	95.827	Seriola_lalandi_dorsalis
ENSKMAG00000015290	polr3a	69	90.282	ENSSARG00000009916	POLR3A	89	90.282	Sorex_araneus
ENSKMAG00000015290	polr3a	100	87.842	ENSSPUG00000013209	POLR3A	100	87.842	Sphenodon_punctatus
ENSKMAG00000015290	polr3a	100	95.899	ENSSPAG00000017712	polr3a	100	95.899	Stegastes_partitus
ENSKMAG00000015290	polr3a	100	89.712	ENSSSCG00000010327	POLR3A	100	90.426	Sus_scrofa
ENSKMAG00000015290	polr3a	100	89.928	ENSTGUG00000006423	-	100	89.928	Taeniopygia_guttata
ENSKMAG00000015290	polr3a	100	94.029	ENSTRUG00000013488	polr3a	100	94.029	Takifugu_rubripes
ENSKMAG00000015290	polr3a	100	94.253	ENSTNIG00000013151	polr3a	100	94.253	Tetraodon_nigroviridis
ENSKMAG00000015290	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSKMAG00000015290	polr3a	100	83.597	ENSTTRG00000007817	POLR3A	100	83.597	Tursiops_truncatus
ENSKMAG00000015290	polr3a	100	87.410	ENSUAMG00000011283	POLR3A	100	87.410	Ursus_americanus
ENSKMAG00000015290	polr3a	100	89.712	ENSUMAG00000013913	POLR3A	100	89.712	Ursus_maritimus
ENSKMAG00000015290	polr3a	95	86.859	ENSVPAG00000003285	POLR3A	100	81.964	Vicugna_pacos
ENSKMAG00000015290	polr3a	100	89.712	ENSVVUG00000025523	POLR3A	100	89.712	Vulpes_vulpes
ENSKMAG00000015290	polr3a	86	90.142	ENSXETG00000018101	polr3a	100	90.142	Xenopus_tropicalis
ENSKMAG00000015290	polr3a	100	95.755	ENSXMAG00000015213	polr3a	100	95.755	Xiphophorus_maculatus