EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015660 (Gene tree)
Gene ID: 108248317
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: uncharacterized LOC108248317
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 1743 bases
Position: chrLWHD01000335.1:4283-6025
Accession: 108248317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021067	RNase_T	PF00929.24	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000021344	-	1125	XM_017437011	ENSKMAP00000021067	223 (aa)	XP_017292500	UPI0007F886AF

Gene Model

Click here to download ENSKMAG00000015660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015660	si:ch1073-296i8.2	81	46.448	ENSKMAG00000015669	-	92	46.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015660	si:ch1073-296i8.2	97	62.598	ENSAOCG00000011593	si:ch1073-296i8.2	91	62.598	Amphiprion_ocellaris
ENSKMAG00000015660	si:ch1073-296i8.2	97	63.137	ENSAPEG00000012492	si:ch1073-296i8.2	91	63.137	Amphiprion_percula
ENSKMAG00000015660	si:ch1073-296i8.2	84	43.158	ENSATEG00000021542	si:ch1073-385f13.3	96	43.158	Anabas_testudineus
ENSKMAG00000015660	si:ch1073-296i8.2	98	75.000	ENSATEG00000021547	si:ch1073-296i8.2	86	75.000	Anabas_testudineus
ENSKMAG00000015660	si:ch1073-296i8.2	79	43.503	ENSACLG00000023991	-	54	43.503	Astatotilapia_calliptera
ENSKMAG00000015660	si:ch1073-296i8.2	83	44.149	ENSCVAG00000001533	-	94	44.149	Cyprinodon_variegatus
ENSKMAG00000015660	si:ch1073-296i8.2	87	61.856	ENSDARG00000093773	si:ch1073-296i8.2	83	61.856	Danio_rerio
ENSKMAG00000015660	si:ch1073-296i8.2	85	48.438	ENSDARG00000092584	si:ch1073-385f13.3	78	48.438	Danio_rerio
ENSKMAG00000015660	si:ch1073-296i8.2	100	76.000	ENSFHEG00000018188	si:ch1073-296i8.2	90	76.000	Fundulus_heteroclitus
ENSKMAG00000015660	si:ch1073-296i8.2	88	41.919	ENSFHEG00000018181	-	99	41.919	Fundulus_heteroclitus
ENSKMAG00000015660	si:ch1073-296i8.2	79	50.000	ENSGMOG00000019565	-	93	50.000	Gadus_morhua
ENSKMAG00000015660	si:ch1073-296i8.2	78	69.540	ENSGMOG00000019335	si:ch1073-296i8.2	98	69.540	Gadus_morhua
ENSKMAG00000015660	si:ch1073-296i8.2	80	71.508	ENSGACG00000007185	si:ch1073-296i8.2	99	71.508	Gasterosteus_aculeatus
ENSKMAG00000015660	si:ch1073-296i8.2	85	42.932	ENSHBUG00000007541	si:ch1073-385f13.3	96	42.932	Haplochromis_burtoni
ENSKMAG00000015660	si:ch1073-296i8.2	88	64.141	ENSHCOG00000008574	si:ch1073-296i8.2	84	64.141	Hippocampus_comes
ENSKMAG00000015660	si:ch1073-296i8.2	88	65.829	ENSLBEG00000019623	si:ch1073-296i8.2	78	65.829	Labrus_bergylta
ENSKMAG00000015660	si:ch1073-296i8.2	85	48.691	ENSLOCG00000014933	-	96	48.691	Lepisosteus_oculatus
ENSKMAG00000015660	si:ch1073-296i8.2	79	47.191	ENSMAMG00000023075	si:ch1073-385f13.3	91	47.191	Mastacembelus_armatus
ENSKMAG00000015660	si:ch1073-296i8.2	68	71.053	ENSMMOG00000018979	si:ch1073-296i8.2	72	71.053	Mola_mola
ENSKMAG00000015660	si:ch1073-296i8.2	84	44.974	ENSMALG00000015952	si:ch1073-385f13.3	96	44.974	Monopterus_albus
ENSKMAG00000015660	si:ch1073-296i8.2	85	43.455	ENSONIG00000012794	si:ch1073-385f13.3	96	43.455	Oreochromis_niloticus
ENSKMAG00000015660	si:ch1073-296i8.2	90	70.244	ENSORLG00000023958	si:ch1073-296i8.2	93	70.244	Oryzias_latipes
ENSKMAG00000015660	si:ch1073-296i8.2	83	44.624	ENSORLG00000030645	si:ch1073-385f13.3	83	44.624	Oryzias_latipes
ENSKMAG00000015660	si:ch1073-296i8.2	91	70.874	ENSORLG00020021912	si:ch1073-296i8.2	94	70.874	Oryzias_latipes_hni
ENSKMAG00000015660	si:ch1073-296i8.2	82	44.324	ENSORLG00020021903	-	93	44.324	Oryzias_latipes_hni
ENSKMAG00000015660	si:ch1073-296i8.2	92	71.220	ENSORLG00015015303	si:ch1073-296i8.2	94	71.220	Oryzias_latipes_hsok
ENSKMAG00000015660	si:ch1073-296i8.2	90	39.801	ENSPKIG00000023552	-	93	39.801	Paramormyrops_kingsleyae
ENSKMAG00000015660	si:ch1073-296i8.2	85	40.314	ENSPFOG00000005521	si:ch1073-385f13.3	96	40.314	Poecilia_formosa
ENSKMAG00000015660	si:ch1073-296i8.2	79	44.382	ENSPFOG00000021742	-	93	44.382	Poecilia_formosa
ENSKMAG00000015660	si:ch1073-296i8.2	85	40.838	ENSPMEG00000013096	si:ch1073-385f13.3	96	40.838	Poecilia_mexicana
ENSKMAG00000015660	si:ch1073-296i8.2	80	43.889	ENSPMEG00000013087	si:ch1073-385f13.3	93	43.889	Poecilia_mexicana
ENSKMAG00000015660	si:ch1073-296i8.2	79	37.073	ENSPREG00000013537	-	77	37.073	Poecilia_reticulata
ENSKMAG00000015660	si:ch1073-296i8.2	83	47.568	ENSPNAG00000018956	si:ch1073-385f13.3	98	47.568	Pygocentrus_nattereri
ENSKMAG00000015660	si:ch1073-296i8.2	100	69.027	ENSSMAG00000004874	si:ch1073-296i8.2	87	70.796	Scophthalmus_maximus
ENSKMAG00000015660	si:ch1073-296i8.2	84	48.677	ENSSLDG00000002379	si:ch1073-385f13.3	95	48.677	Seriola_lalandi_dorsalis
ENSKMAG00000015660	si:ch1073-296i8.2	87	74.872	ENSSPAG00000012797	si:ch1073-296i8.2	100	74.872	Stegastes_partitus
ENSKMAG00000015660	si:ch1073-296i8.2	87	64.767	ENSTNIG00000010399	si:ch1073-296i8.2	87	63.819	Tetraodon_nigroviridis
ENSKMAG00000015660	si:ch1073-296i8.2	86	40.933	ENSXMAG00000021869	si:ch1073-385f13.3	97	40.933	Xiphophorus_maculatus