EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015844 (Gene tree)
Gene ID: 108250753
Gene Symbol: -
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 36647 bases
Position: chrLWHD01000686.1:57227-93873
Accession: 108250753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021383	BRK	PF07533.16	1.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000021663	-	4962	XM_017440781	ENSKMAP00000021383	1601 (aa)	XP_017296270	UPI0007F8D717

Gene Model

Click here to download ENSKMAG00000015844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015844	-	92	72.368	ENSKMAG00000019518	-	98	72.482
ENSKMAG00000015844	-	93	71.598	ENSKMAG00000011931	smarca4a	99	71.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015844	-	98	79.987	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSKMAG00000015844	-	100	92.630	ENSAPOG00000002641	SMARCA2	100	92.509	Acanthochromis_polyacanthus
ENSKMAG00000015844	-	88	76.671	ENSAMEG00000012325	SMARCA2	99	85.301	Ailuropoda_melanoleuca
ENSKMAG00000015844	-	100	89.882	ENSACIG00000015607	SMARCA2	100	89.261	Amphilophus_citrinellus
ENSKMAG00000015844	-	100	92.821	ENSAOCG00000009647	-	100	92.509	Amphiprion_ocellaris
ENSKMAG00000015844	-	100	92.505	ENSAPEG00000007646	SMARCA2	100	92.447	Amphiprion_percula
ENSKMAG00000015844	-	99	92.975	ENSATEG00000006916	SMARCA2	98	92.844	Anabas_testudineus
ENSKMAG00000015844	-	87	78.344	ENSAPLG00000013873	SMARCA2	93	77.701	Anas_platyrhynchos
ENSKMAG00000015844	-	98	78.931	ENSACAG00000002423	SMARCA2	100	78.585	Anolis_carolinensis
ENSKMAG00000015844	-	98	79.987	ENSANAG00000026498	SMARCA2	100	80.423	Aotus_nancymaae
ENSKMAG00000015844	-	100	90.262	ENSACLG00000004248	SMARCA2	100	90.518	Astatotilapia_calliptera
ENSKMAG00000015844	-	99	84.596	ENSAMXG00000012404	smarca2	99	84.418	Astyanax_mexicanus
ENSKMAG00000015844	-	98	79.222	ENSBTAG00000007494	SMARCA2	100	79.045	Bos_taurus
ENSKMAG00000015844	-	98	79.541	ENSCJAG00000010710	SMARCA2	99	81.324	Callithrix_jacchus
ENSKMAG00000015844	-	98	79.796	ENSCAFG00000002013	SMARCA2	100	79.553	Canis_familiaris
ENSKMAG00000015844	-	73	86.707	ENSCAFG00020026802	SMARCA2	94	86.535	Canis_lupus_dingo
ENSKMAG00000015844	-	98	79.414	ENSCHIG00000025863	SMARCA2	100	79.045	Capra_hircus
ENSKMAG00000015844	-	97	80.488	ENSTSYG00000003858	SMARCA2	99	80.752	Carlito_syrichta
ENSKMAG00000015844	-	97	77.977	ENSCAPG00000002890	SMARCA2	99	77.561	Cavia_aperea
ENSKMAG00000015844	-	98	79.606	ENSCPOG00000005475	SMARCA2	100	79.876	Cavia_porcellus
ENSKMAG00000015844	-	98	80.178	ENSCCAG00000030636	SMARCA2	100	80.609	Cebus_capucinus
ENSKMAG00000015844	-	98	79.414	ENSCATG00000031470	SMARCA2	100	79.689	Cercocebus_atys
ENSKMAG00000015844	-	98	79.669	ENSCLAG00000014484	SMARCA2	100	80.236	Chinchilla_lanigera
ENSKMAG00000015844	-	91	81.527	ENSCSAG00000008650	SMARCA2	99	81.022	Chlorocebus_sabaeus
ENSKMAG00000015844	-	84	81.586	ENSCHOG00000004316	SMARCA2	86	81.586	Choloepus_hoffmanni
ENSKMAG00000015844	-	98	80.089	ENSCPBG00000025463	SMARCA2	100	83.531	Chrysemys_picta_bellii
ENSKMAG00000015844	-	98	80.115	ENSCANG00000039597	SMARCA2	100	80.112	Colobus_angolensis_palliatus
ENSKMAG00000015844	-	98	74.761	ENSCGRG00001002323	Smarca2	100	74.286	Cricetulus_griseus_chok1gshd
ENSKMAG00000015844	-	99	86.076	ENSCSEG00000019311	SMARCA2	98	85.696	Cynoglossus_semilaevis
ENSKMAG00000015844	-	85	88.668	ENSCVAG00000016571	SMARCA2	77	92.571	Cyprinodon_variegatus
ENSKMAG00000015844	-	100	83.509	ENSDARG00000008904	smarca2	100	82.992	Danio_rerio
ENSKMAG00000015844	-	98	79.796	ENSDNOG00000006402	SMARCA2	100	79.739	Dasypus_novemcinctus
ENSKMAG00000015844	-	98	79.732	ENSDORG00000014832	Smarca2	100	80.062	Dipodomys_ordii
ENSKMAG00000015844	-	79	58.743	FBgn0000212	brm	99	53.271	Drosophila_melanogaster
ENSKMAG00000015844	-	95	67.945	ENSEBUG00000011442	-	97	67.660	Eptatretus_burgeri
ENSKMAG00000015844	-	85	60.171	ENSEBUG00000002449	-	93	62.135	Eptatretus_burgeri
ENSKMAG00000015844	-	98	79.286	ENSEASG00005010312	SMARCA2	100	79.032	Equus_asinus_asinus
ENSKMAG00000015844	-	60	94.118	ENSEEUG00000015540	-	69	78.378	Erinaceus_europaeus
ENSKMAG00000015844	-	95	82.368	ENSELUG00000010318	smarca2	99	80.848	Esox_lucius
ENSKMAG00000015844	-	98	79.477	ENSFCAG00000001568	SMARCA2	100	79.428	Felis_catus
ENSKMAG00000015844	-	98	79.771	ENSFALG00000010416	SMARCA2	100	80.533	Ficedula_albicollis
ENSKMAG00000015844	-	98	78.675	ENSFDAG00000010502	SMARCA2	100	79.054	Fukomys_damarensis
ENSKMAG00000015844	-	100	93.567	ENSFHEG00000021250	SMARCA2	100	93.504	Fundulus_heteroclitus
ENSKMAG00000015844	-	99	81.670	ENSGMOG00000014229	SMARCA2	99	81.356	Gadus_morhua
ENSKMAG00000015844	-	98	79.580	ENSGALG00000010164	SMARCA2	100	79.280	Gallus_gallus
ENSKMAG00000015844	-	95	83.604	ENSGAFG00000001164	SMARCA2	95	83.497	Gambusia_affinis
ENSKMAG00000015844	-	99	87.366	ENSGACG00000014488	SMARCA2	99	86.989	Gasterosteus_aculeatus
ENSKMAG00000015844	-	98	79.898	ENSGAGG00000024412	SMARCA2	100	79.529	Gopherus_agassizii
ENSKMAG00000015844	-	88	85.819	ENSGGOG00000000513	SMARCA2	100	79.855	Gorilla_gorilla
ENSKMAG00000015844	-	100	92.010	ENSHBUG00000006691	SMARCA2	100	92.327	Haplochromis_burtoni
ENSKMAG00000015844	-	97	79.718	ENSHGLG00000005215	SMARCA2	98	80.202	Heterocephalus_glaber_female
ENSKMAG00000015844	-	98	79.286	ENSHGLG00100010496	SMARCA2	100	79.677	Heterocephalus_glaber_male
ENSKMAG00000015844	-	83	86.207	ENSHCOG00000015348	-	95	87.970	Hippocampus_comes
ENSKMAG00000015844	-	99	82.832	ENSIPUG00000011060	smarca2	98	82.405	Ictalurus_punctatus
ENSKMAG00000015844	-	98	79.987	ENSSTOG00000006812	SMARCA2	100	80.298	Ictidomys_tridecemlineatus
ENSKMAG00000015844	-	98	79.414	ENSJJAG00000010867	Smarca2	100	79.428	Jaculus_jaculus
ENSKMAG00000015844	-	98	82.114	ENSLOCG00000011499	smarca2	99	81.683	Lepisosteus_oculatus
ENSKMAG00000015844	-	98	78.947	ENSLAFG00000014061	SMARCA2	100	79.565	Loxodonta_africana
ENSKMAG00000015844	-	79	85.276	ENSMFAG00000003814	SMARCA2	100	78.758	Macaca_fascicularis
ENSKMAG00000015844	-	98	79.924	ENSMMUG00000015279	SMARCA2	100	80.112	Macaca_mulatta
ENSKMAG00000015844	-	98	79.236	ENSMNEG00000041069	SMARCA2	100	79.752	Macaca_nemestrina
ENSKMAG00000015844	-	93	85.714	ENSMLEG00000027418	SMARCA2	95	88.451	Mandrillus_leucophaeus
ENSKMAG00000015844	-	100	92.475	ENSMAMG00000003056	SMARCA2	100	92.600	Mastacembelus_armatus
ENSKMAG00000015844	-	100	92.135	ENSMZEG00005020709	SMARCA2	100	92.389	Maylandia_zebra
ENSKMAG00000015844	-	74	68.296	ENSMGAG00000005160	-	100	67.768	Meleagris_gallopavo
ENSKMAG00000015844	-	98	79.669	ENSMICG00000005162	SMARCA2	100	80.050	Microcebus_murinus
ENSKMAG00000015844	-	98	80.140	ENSMOCG00000001611	Smarca2	100	79.789	Microtus_ochrogaster
ENSKMAG00000015844	-	99	86.257	ENSMMOG00000014196	SMARCA2	99	85.814	Mola_mola
ENSKMAG00000015844	-	98	79.694	ENSMODG00000003578	SMARCA2	100	79.578	Monodelphis_domestica
ENSKMAG00000015844	-	99	90.310	ENSMALG00000009611	SMARCA2	99	90.310	Monopterus_albus
ENSKMAG00000015844	-	96	80.620	MGP_CAROLIEiJ_G0022841	Smarca2	99	80.227	Mus_caroli
ENSKMAG00000015844	-	96	80.556	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSKMAG00000015844	-	96	80.814	MGP_PahariEiJ_G0014334	Smarca2	99	80.252	Mus_pahari
ENSKMAG00000015844	-	96	80.362	MGP_SPRETEiJ_G0023759	Smarca2	97	90.909	Mus_spretus
ENSKMAG00000015844	-	79	84.945	ENSMPUG00000005171	SMARCA2	94	85.179	Mustela_putorius_furo
ENSKMAG00000015844	-	97	75.906	ENSMLUG00000002342	SMARCA2	99	76.235	Myotis_lucifugus
ENSKMAG00000015844	-	97	78.821	ENSNGAG00000000108	Smarca2	99	78.941	Nannospalax_galili
ENSKMAG00000015844	-	95	77.814	ENSNBRG00000017998	SMARCA2	94	87.838	Neolamprologus_brichardi
ENSKMAG00000015844	-	93	84.901	ENSNLEG00000008575	SMARCA2	100	76.694	Nomascus_leucogenys
ENSKMAG00000015844	-	93	74.646	ENSMEUG00000009812	SMARCA2	100	72.140	Notamacropus_eugenii
ENSKMAG00000015844	-	79	80.645	ENSOPRG00000013474	SMARCA2	100	76.084	Ochotona_princeps
ENSKMAG00000015844	-	97	78.558	ENSODEG00000005452	SMARCA2	98	79.787	Octodon_degus
ENSKMAG00000015844	-	99	92.143	ENSONIG00000014163	SMARCA2	99	92.206	Oreochromis_niloticus
ENSKMAG00000015844	-	79	86.087	ENSOCUG00000006320	SMARCA2	100	78.827	Oryctolagus_cuniculus
ENSKMAG00000015844	-	100	91.448	ENSORLG00000020820	SMARCA2	100	91.573	Oryzias_latipes
ENSKMAG00000015844	-	100	91.511	ENSORLG00015006289	SMARCA2	100	91.635	Oryzias_latipes_hsok
ENSKMAG00000015844	-	100	90.693	ENSOMEG00000009736	-	100	91.131	Oryzias_melastigma
ENSKMAG00000015844	-	78	85.782	ENSOGAG00000017053	SMARCA2	99	79.349	Otolemur_garnettii
ENSKMAG00000015844	-	79	84.894	ENSOARG00000013265	SMARCA2	100	78.169	Ovis_aries
ENSKMAG00000015844	-	90	85.840	ENSPPAG00000038717	SMARCA2	99	85.569	Pan_paniscus
ENSKMAG00000015844	-	98	79.541	ENSPPRG00000001879	SMARCA2	100	79.490	Panthera_pardus
ENSKMAG00000015844	-	98	79.605	ENSPTRG00000051168	SMARCA2	100	79.950	Pan_troglodytes
ENSKMAG00000015844	-	98	75.347	ENSPANG00000025121	SMARCA2	100	75.960	Papio_anubis
ENSKMAG00000015844	-	100	83.178	ENSPKIG00000018469	-	100	82.492	Paramormyrops_kingsleyae
ENSKMAG00000015844	-	98	79.556	ENSPSIG00000006284	SMARCA2	100	79.257	Pelodiscus_sinensis
ENSKMAG00000015844	-	99	82.691	ENSPMGG00000013696	-	98	82.565	Periophthalmus_magnuspinnatus
ENSKMAG00000015844	-	98	79.414	ENSPEMG00000019821	Smarca2	100	79.205	Peromyscus_maniculatus_bairdii
ENSKMAG00000015844	-	95	70.417	ENSPMAG00000005337	-	97	69.148	Petromyzon_marinus
ENSKMAG00000015844	-	98	79.567	ENSPCIG00000015658	SMARCA2	100	79.578	Phascolarctos_cinereus
ENSKMAG00000015844	-	100	93.146	ENSPFOG00000001856	SMARCA2	100	93.146	Poecilia_formosa
ENSKMAG00000015844	-	99	93.114	ENSPLAG00000017829	SMARCA2	96	93.114	Poecilia_latipinna
ENSKMAG00000015844	-	99	93.047	ENSPMEG00000001815	-	99	93.022	Poecilia_mexicana
ENSKMAG00000015844	-	100	92.777	ENSPREG00000013800	SMARCA2	100	92.839	Poecilia_reticulata
ENSKMAG00000015844	-	98	79.151	ENSPPYG00000019258	SMARCA2	100	79.615	Pongo_abelii
ENSKMAG00000015844	-	77	74.296	ENSPCAG00000016969	SMARCA2	78	74.296	Procavia_capensis
ENSKMAG00000015844	-	98	78.061	ENSPCOG00000025709	SMARCA2	100	78.075	Propithecus_coquereli
ENSKMAG00000015844	-	90	81.917	ENSPVAG00000000901	SMARCA2	94	80.904	Pteropus_vampyrus
ENSKMAG00000015844	-	100	88.965	ENSPNYG00000004533	SMARCA2	100	89.027	Pundamilia_nyererei
ENSKMAG00000015844	-	99	84.649	ENSPNAG00000014635	smarca2	98	84.900	Pygocentrus_nattereri
ENSKMAG00000015844	-	98	79.156	ENSRNOG00000011931	Smarca2	100	78.712	Rattus_norvegicus
ENSKMAG00000015844	-	92	77.829	ENSRBIG00000038618	SMARCA2	93	86.848	Rhinopithecus_bieti
ENSKMAG00000015844	-	98	79.468	ENSRROG00000019271	SMARCA2	99	80.751	Rhinopithecus_roxellana
ENSKMAG00000015844	-	91	85.354	ENSSBOG00000034827	SMARCA2	96	85.328	Saimiri_boliviensis_boliviensis
ENSKMAG00000015844	-	98	79.554	ENSSHAG00000007884	SMARCA2	100	79.503	Sarcophilus_harrisii
ENSKMAG00000015844	-	89	85.087	ENSSFOG00015014870	SMARCA2	97	84.599	Scleropages_formosus
ENSKMAG00000015844	-	100	90.621	ENSSMAG00000013707	SMARCA2	100	91.242	Scophthalmus_maximus
ENSKMAG00000015844	-	100	91.723	ENSSDUG00000008852	-	100	91.723	Seriola_dumerili
ENSKMAG00000015844	-	99	88.261	ENSSLDG00000025449	SMARCA2	98	88.449	Seriola_lalandi_dorsalis
ENSKMAG00000015844	-	93	70.930	ENSSARG00000007888	SMARCA2	90	75.581	Sorex_araneus
ENSKMAG00000015844	-	98	75.681	ENSSPUG00000001629	SMARCA2	98	77.249	Sphenodon_punctatus
ENSKMAG00000015844	-	100	92.567	ENSSPAG00000020091	-	100	92.634	Stegastes_partitus
ENSKMAG00000015844	-	98	79.222	ENSSSCG00000005232	SMARCA2	100	79.022	Sus_scrofa
ENSKMAG00000015844	-	98	79.262	ENSTGUG00000005460	SMARCA2	100	79.342	Taeniopygia_guttata
ENSKMAG00000015844	-	100	88.896	ENSTRUG00000015619	SMARCA2	99	89.241	Takifugu_rubripes
ENSKMAG00000015844	-	61	97.619	ENSTBEG00000008767	SMARCA2	69	97.619	Tupaia_belangeri
ENSKMAG00000015844	-	93	79.521	ENSTTRG00000002033	SMARCA2	95	79.315	Tursiops_truncatus
ENSKMAG00000015844	-	89	78.200	ENSUAMG00000024701	SMARCA2	99	79.024	Ursus_americanus
ENSKMAG00000015844	-	84	78.873	ENSVPAG00000001204	SMARCA2	98	72.442	Vicugna_pacos
ENSKMAG00000015844	-	72	86.885	ENSVVUG00000004598	SMARCA2	96	86.713	Vulpes_vulpes
ENSKMAG00000015844	-	100	76.275	ENSXETG00000015299	smarca2	100	75.877	Xenopus_tropicalis
ENSKMAG00000015844	-	89	88.003	ENSXCOG00000011073	SMARCA2	99	87.517	Xiphophorus_couchianus
ENSKMAG00000015844	-	100	92.666	ENSXMAG00000015611	SMARCA2	100	92.853	Xiphophorus_maculatus