EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000015910 (Gene tree)
Gene ID: 108230236
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 2955 bases
Position: chrLWHD01000008.1:5221895-5224849
Accession: 108230236
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021399	GTP_EFTU	PF00009.27	6.5e-55	1	1
ENSKMAP00000021399	MMR_HSR1	PF01926.23	3.7e-08	1	1
ENSKMAP00000021399	GTP_EFTU_D2	PF03144.25	9.4e-13	1	1
ENSKMAP00000021399	GTP_EFTU_D3	PF03143.17	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000021678	-	2350	XM_017406281	ENSKMAP00000021399	457 (aa)	XP_017261770	UPI0007F8A273

Gene Model

Click here to download ENSKMAG00000015910's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000015910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000015910	si:dkey-37o8.1	95	37.585	ENSKMAG00000012130	hbs1l	70	36.889
ENSKMAG00000015910	si:dkey-37o8.1	97	38.341	ENSKMAG00000006311	-	77	38.341
ENSKMAG00000015910	si:dkey-37o8.1	100	68.398	ENSKMAG00000016211	EEF1A1	100	68.398
ENSKMAG00000015910	si:dkey-37o8.1	100	69.935	ENSKMAG00000000413	-	96	72.009
ENSKMAG00000015910	si:dkey-37o8.1	97	30.921	ENSKMAG00000009794	tufm	89	30.921
ENSKMAG00000015910	si:dkey-37o8.1	100	68.182	ENSKMAG00000020147	eef1a1b	100	68.182
ENSKMAG00000015910	si:dkey-37o8.1	97	38.085	ENSKMAG00000021919	GSPT1	73	38.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000015910	si:dkey-37o8.1	98	90.179	ENSAPOG00000016459	si:dkey-37o8.1	98	90.179	Acanthochromis_polyacanthus
ENSKMAG00000015910	si:dkey-37o8.1	96	88.330	ENSACIG00000020985	si:dkey-37o8.1	82	88.330	Amphilophus_citrinellus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	ENSAOCG00000002663	si:dkey-37o8.1	100	89.716	Amphiprion_ocellaris
ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	ENSAPEG00000012670	si:dkey-37o8.1	100	89.716	Amphiprion_percula
ENSKMAG00000015910	si:dkey-37o8.1	92	90.521	ENSATEG00000002217	si:dkey-37o8.1	99	90.521	Anabas_testudineus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.497	ENSACLG00000003519	si:dkey-37o8.1	100	89.497	Astatotilapia_calliptera
ENSKMAG00000015910	si:dkey-37o8.1	100	82.969	ENSAMXG00000002728	si:dkey-37o8.1	100	82.969	Astyanax_mexicanus
ENSKMAG00000015910	si:dkey-37o8.1	96	73.864	ENSCPBG00000020570	-	87	74.032	Chrysemys_picta_bellii
ENSKMAG00000015910	si:dkey-37o8.1	100	83.660	ENSCSEG00000019807	si:dkey-37o8.1	100	82.974	Cynoglossus_semilaevis
ENSKMAG00000015910	si:dkey-37o8.1	99	91.850	ENSCVAG00000009828	si:dkey-37o8.1	99	91.850	Cyprinodon_variegatus
ENSKMAG00000015910	si:dkey-37o8.1	100	81.441	ENSDARG00000071727	si:dkey-37o8.1	95	81.441	Danio_rerio
ENSKMAG00000015910	si:dkey-37o8.1	100	82.533	ENSELUG00000007495	si:dkey-37o8.1	100	82.533	Esox_lucius
ENSKMAG00000015910	si:dkey-37o8.1	100	91.904	ENSFHEG00000017452	si:dkey-37o8.1	100	91.904	Fundulus_heteroclitus
ENSKMAG00000015910	si:dkey-37o8.1	99	80.396	ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	Gadus_morhua
ENSKMAG00000015910	si:dkey-37o8.1	98	84.821	ENSGAFG00000000367	si:dkey-37o8.1	99	84.821	Gambusia_affinis
ENSKMAG00000015910	si:dkey-37o8.1	100	87.090	ENSGACG00000004505	si:dkey-37o8.1	100	87.090	Gasterosteus_aculeatus
ENSKMAG00000015910	si:dkey-37o8.1	96	74.260	ENSGAGG00000007724	-	93	77.885	Gopherus_agassizii
ENSKMAG00000015910	si:dkey-37o8.1	100	89.278	ENSHBUG00000015515	si:dkey-37o8.1	100	89.278	Haplochromis_burtoni
ENSKMAG00000015910	si:dkey-37o8.1	98	79.333	ENSHCOG00000001215	si:dkey-37o8.1	99	79.333	Hippocampus_comes
ENSKMAG00000015910	si:dkey-37o8.1	100	81.878	ENSIPUG00000004067	si:dkey-37o8.1	100	81.878	Ictalurus_punctatus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.059	ENSLBEG00000021334	si:dkey-37o8.1	90	89.059	Labrus_bergylta
ENSKMAG00000015910	si:dkey-37o8.1	99	74.449	ENSLACG00000003948	si:dkey-37o8.1	99	74.449	Latimeria_chalumnae
ENSKMAG00000015910	si:dkey-37o8.1	100	80.392	ENSLOCG00000011245	si:dkey-37o8.1	100	80.392	Lepisosteus_oculatus
ENSKMAG00000015910	si:dkey-37o8.1	99	74.449	ENSMAMG00000009907	si:dkey-37o8.1	95	74.449	Mastacembelus_armatus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.497	ENSMZEG00005018358	si:dkey-37o8.1	100	89.497	Maylandia_zebra
ENSKMAG00000015910	si:dkey-37o8.1	98	88.393	ENSMMOG00000004111	si:dkey-37o8.1	98	88.393	Mola_mola
ENSKMAG00000015910	si:dkey-37o8.1	96	80.365	ENSMALG00000017152	si:dkey-37o8.1	99	80.365	Monopterus_albus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.059	ENSNBRG00000013552	si:dkey-37o8.1	100	89.059	Neolamprologus_brichardi
ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	ENSONIG00000006165	si:dkey-37o8.1	100	88.621	Oreochromis_niloticus
ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	ENSORLG00000019066	si:dkey-37o8.1	100	88.621	Oryzias_latipes
ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	ENSORLG00020008094	si:dkey-37o8.1	100	88.621	Oryzias_latipes_hni
ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	ENSORLG00015008410	si:dkey-37o8.1	100	88.621	Oryzias_latipes_hsok
ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	ENSOMEG00000001868	si:dkey-37o8.1	100	89.716	Oryzias_melastigma
ENSKMAG00000015910	si:dkey-37o8.1	100	81.481	ENSPKIG00000017246	si:dkey-37o8.1	100	81.481	Paramormyrops_kingsleyae
ENSKMAG00000015910	si:dkey-37o8.1	59	66.182	ENSPSIG00000008080	-	97	66.182	Pelodiscus_sinensis
ENSKMAG00000015910	si:dkey-37o8.1	100	91.685	ENSPFOG00000013173	si:dkey-37o8.1	100	91.685	Poecilia_formosa
ENSKMAG00000015910	si:dkey-37o8.1	100	90.591	ENSPLAG00000010405	si:dkey-37o8.1	100	90.591	Poecilia_latipinna
ENSKMAG00000015910	si:dkey-37o8.1	100	92.123	ENSPMEG00000015233	si:dkey-37o8.1	100	92.123	Poecilia_mexicana
ENSKMAG00000015910	si:dkey-37o8.1	99	91.189	ENSPREG00000006280	si:dkey-37o8.1	100	91.189	Poecilia_reticulata
ENSKMAG00000015910	si:dkey-37o8.1	100	88.840	ENSPNYG00000002059	si:dkey-37o8.1	100	88.840	Pundamilia_nyererei
ENSKMAG00000015910	si:dkey-37o8.1	100	82.751	ENSPNAG00000009990	si:dkey-37o8.1	100	82.751	Pygocentrus_nattereri
ENSKMAG00000015910	si:dkey-37o8.1	98	82.483	ENSSFOG00015019070	si:dkey-37o8.1	99	82.483	Scleropages_formosus
ENSKMAG00000015910	si:dkey-37o8.1	98	90.667	ENSSMAG00000016143	si:dkey-37o8.1	99	90.667	Scophthalmus_maximus
ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	ENSSDUG00000009163	si:dkey-37o8.1	100	89.716	Seriola_dumerili
ENSKMAG00000015910	si:dkey-37o8.1	100	89.934	ENSSLDG00000023761	si:dkey-37o8.1	100	89.934	Seriola_lalandi_dorsalis
ENSKMAG00000015910	si:dkey-37o8.1	99	71.082	ENSSPUG00000007467	-	98	71.333	Sphenodon_punctatus
ENSKMAG00000015910	si:dkey-37o8.1	100	90.372	ENSSPAG00000013856	si:dkey-37o8.1	100	90.372	Stegastes_partitus
ENSKMAG00000015910	si:dkey-37o8.1	97	89.663	ENSTRUG00000009006	si:dkey-37o8.1	99	89.663	Takifugu_rubripes
ENSKMAG00000015910	si:dkey-37o8.1	98	89.732	ENSTNIG00000017138	si:dkey-37o8.1	97	89.732	Tetraodon_nigroviridis
ENSKMAG00000015910	si:dkey-37o8.1	96	76.082	ENSXETG00000017744	42Sp50	97	74.723	Xenopus_tropicalis
ENSKMAG00000015910	si:dkey-37o8.1	99	92.070	ENSXCOG00000012296	si:dkey-37o8.1	100	94.505	Xiphophorus_couchianus
ENSKMAG00000015910	si:dkey-37o8.1	100	92.123	ENSXMAG00000001998	si:dkey-37o8.1	100	92.123	Xiphophorus_maculatus