EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016118 (Gene tree)
Gene ID: 108246040
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 13899 bases
Position: chrLWHD01000195.1:567794-581692
Accession: 108246040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021759	RRM_4	PF10598.9	2.8e-48	1	1
ENSKMAP00000021759	U5_2-snRNA_bdg	PF10597.9	6.6e-74	1	1
ENSKMAP00000021759	PRO8NT	PF08082.11	2e-87	1	1
ENSKMAP00000021759	U6-snRNA_bdg	PF10596.9	1.6e-89	1	1
ENSKMAP00000021759	PROCN	PF08083.11	5.7e-236	1	1
ENSKMAP00000021759	PRP8_domainIV	PF12134.8	3.9e-130	1	1
ENSKMAP00000021759	PROCT	PF08084.11	2.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022040	-	7029	XM_017433377	ENSKMAP00000021759	2342 (aa)	XP_017288866	-

Gene Model

Click here to download ENSKMAG00000016118's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016118	prpf8	99	97.977	ENSG00000174231	PRPF8	99	97.977	Homo_sapiens
ENSKMAG00000016118	prpf8	99	99.227	ENSAPOG00000010079	prpf8	99	99.227	Acanthochromis_polyacanthus
ENSKMAG00000016118	prpf8	99	97.977	ENSAMEG00000007940	PRPF8	99	97.977	Ailuropoda_melanoleuca
ENSKMAG00000016118	prpf8	100	97.444	ENSACIG00000018280	prpf8	99	97.444	Amphilophus_citrinellus
ENSKMAG00000016118	prpf8	99	99.184	ENSAOCG00000010725	prpf8	99	99.184	Amphiprion_ocellaris
ENSKMAG00000016118	prpf8	99	99.184	ENSAPEG00000014397	prpf8	99	99.184	Amphiprion_percula
ENSKMAG00000016118	prpf8	99	98.540	ENSATEG00000010062	prpf8	99	98.540	Anabas_testudineus
ENSKMAG00000016118	prpf8	96	98.132	ENSAPLG00000010357	PRPF8	100	98.132	Anas_platyrhynchos
ENSKMAG00000016118	prpf8	82	96.237	ENSACAG00000014784	PRPF8	99	96.237	Anolis_carolinensis
ENSKMAG00000016118	prpf8	99	97.977	ENSANAG00000032629	PRPF8	99	97.977	Aotus_nancymaae
ENSKMAG00000016118	prpf8	100	98.762	ENSACLG00000020858	prpf8	99	99.218	Astatotilapia_calliptera
ENSKMAG00000016118	prpf8	99	98.838	ENSAMXG00000020291	prpf8	99	98.838	Astyanax_mexicanus
ENSKMAG00000016118	prpf8	99	97.977	ENSBTAG00000011488	PRPF8	99	97.977	Bos_taurus
ENSKMAG00000016118	prpf8	99	86.661	WBGene00004187	prp-8	99	87.024	Caenorhabditis_elegans
ENSKMAG00000016118	prpf8	99	97.977	ENSCJAG00000001911	PRPF8	99	97.977	Callithrix_jacchus
ENSKMAG00000016118	prpf8	99	97.977	ENSCAFG00000019221	PRPF8	99	97.977	Canis_familiaris
ENSKMAG00000016118	prpf8	96	98.170	ENSCAFG00020009943	PRPF8	100	98.170	Canis_lupus_dingo
ENSKMAG00000016118	prpf8	99	97.977	ENSCHIG00000017499	PRPF8	99	97.977	Capra_hircus
ENSKMAG00000016118	prpf8	99	97.977	ENSTSYG00000014120	PRPF8	99	97.977	Carlito_syrichta
ENSKMAG00000016118	prpf8	96	95.947	ENSCAPG00000009459	PRPF8	99	95.947	Cavia_aperea
ENSKMAG00000016118	prpf8	99	97.977	ENSCPOG00000010379	PRPF8	99	97.977	Cavia_porcellus
ENSKMAG00000016118	prpf8	99	97.977	ENSCCAG00000031983	-	99	97.977	Cebus_capucinus
ENSKMAG00000016118	prpf8	99	97.977	ENSCATG00000038595	PRPF8	99	97.977	Cercocebus_atys
ENSKMAG00000016118	prpf8	99	97.977	ENSCLAG00000004388	PRPF8	99	97.977	Chinchilla_lanigera
ENSKMAG00000016118	prpf8	99	97.977	ENSCSAG00000013929	PRPF8	99	97.977	Chlorocebus_sabaeus
ENSKMAG00000016118	prpf8	80	97.333	ENSCHOG00000008590	PRPF8	87	97.333	Choloepus_hoffmanni
ENSKMAG00000016118	prpf8	99	97.936	ENSCPBG00000020409	PRPF8	99	97.936	Chrysemys_picta_bellii
ENSKMAG00000016118	prpf8	98	92.993	ENSCSAVG00000007825	-	100	91.323	Ciona_savignyi
ENSKMAG00000016118	prpf8	99	97.977	ENSCANG00000043088	PRPF8	99	97.977	Colobus_angolensis_palliatus
ENSKMAG00000016118	prpf8	73	99.016	ENSCGRG00000005129	Prpf8	100	99.016	Cricetulus_griseus_crigri
ENSKMAG00000016118	prpf8	100	98.591	ENSCSEG00000007905	prpf8	100	98.591	Cynoglossus_semilaevis
ENSKMAG00000016118	prpf8	99	98.714	ENSDARG00000026180	prpf8	99	98.714	Danio_rerio
ENSKMAG00000016118	prpf8	92	98.148	ENSDNOG00000018471	PRPF8	99	98.148	Dasypus_novemcinctus
ENSKMAG00000016118	prpf8	83	96.922	ENSDORG00000006185	Prpf8	95	96.922	Dipodomys_ordii
ENSKMAG00000016118	prpf8	99	91.414	FBgn0033688	Prp8	97	92.009	Drosophila_melanogaster
ENSKMAG00000016118	prpf8	99	92.596	ENSETEG00000017592	PRPF8	99	92.596	Echinops_telfairi
ENSKMAG00000016118	prpf8	99	93.433	ENSEBUG00000006548	prpf8	99	93.433	Eptatretus_burgeri
ENSKMAG00000016118	prpf8	99	97.977	ENSEASG00005009514	PRPF8	99	98.534	Equus_asinus_asinus
ENSKMAG00000016118	prpf8	97	98.198	ENSECAG00000021318	PRPF8	100	98.198	Equus_caballus
ENSKMAG00000016118	prpf8	66	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSKMAG00000016118	prpf8	97	97.718	ENSELUG00000007120	prpf8	99	97.718	Esox_lucius
ENSKMAG00000016118	prpf8	99	97.977	ENSFCAG00000006297	PRPF8	99	97.977	Felis_catus
ENSKMAG00000016118	prpf8	99	97.979	ENSFALG00000006628	PRPF8	99	97.979	Ficedula_albicollis
ENSKMAG00000016118	prpf8	99	97.977	ENSFDAG00000004711	PRPF8	99	97.977	Fukomys_damarensis
ENSKMAG00000016118	prpf8	100	98.634	ENSFHEG00000021084	prpf8	100	98.634	Fundulus_heteroclitus
ENSKMAG00000016118	prpf8	99	96.730	ENSGMOG00000002028	prpf8	99	96.730	Gadus_morhua
ENSKMAG00000016118	prpf8	99	97.979	ENSGALG00000002943	PRPF8	99	97.979	Gallus_gallus
ENSKMAG00000016118	prpf8	100	98.890	ENSGAFG00000010337	prpf8	99	98.890	Gambusia_affinis
ENSKMAG00000016118	prpf8	100	98.719	ENSGACG00000008504	prpf8	100	98.549	Gasterosteus_aculeatus
ENSKMAG00000016118	prpf8	99	98.022	ENSGAGG00000008350	PRPF8	99	98.022	Gopherus_agassizii
ENSKMAG00000016118	prpf8	99	97.977	ENSGGOG00000005516	PRPF8	99	97.977	Gorilla_gorilla
ENSKMAG00000016118	prpf8	100	98.292	ENSHBUG00000016192	prpf8	100	98.292	Haplochromis_burtoni
ENSKMAG00000016118	prpf8	99	97.977	ENSHGLG00000012029	PRPF8	99	97.977	Heterocephalus_glaber_female
ENSKMAG00000016118	prpf8	99	97.977	ENSHGLG00100016494	PRPF8	99	97.977	Heterocephalus_glaber_male
ENSKMAG00000016118	prpf8	99	98.755	ENSHCOG00000016414	prpf8	99	98.755	Hippocampus_comes
ENSKMAG00000016118	prpf8	99	98.669	ENSIPUG00000023230	prpf8	99	98.669	Ictalurus_punctatus
ENSKMAG00000016118	prpf8	99	97.977	ENSSTOG00000005128	PRPF8	99	97.977	Ictidomys_tridecemlineatus
ENSKMAG00000016118	prpf8	99	95.824	ENSJJAG00000021159	Prpf8	99	95.824	Jaculus_jaculus
ENSKMAG00000016118	prpf8	99	99.012	ENSLBEG00000026903	prpf8	99	99.012	Labrus_bergylta
ENSKMAG00000016118	prpf8	94	95.739	ENSLACG00000010479	PRPF8	99	98.309	Latimeria_chalumnae
ENSKMAG00000016118	prpf8	99	98.882	ENSLOCG00000005409	prpf8	99	98.882	Lepisosteus_oculatus
ENSKMAG00000016118	prpf8	99	97.977	ENSLAFG00000015445	PRPF8	99	97.977	Loxodonta_africana
ENSKMAG00000016118	prpf8	99	97.977	ENSMFAG00000039995	PRPF8	99	97.977	Macaca_fascicularis
ENSKMAG00000016118	prpf8	99	97.977	ENSMMUG00000004820	PRPF8	99	97.977	Macaca_mulatta
ENSKMAG00000016118	prpf8	99	97.977	ENSMNEG00000035713	PRPF8	99	97.977	Macaca_nemestrina
ENSKMAG00000016118	prpf8	99	97.977	ENSMLEG00000037937	PRPF8	99	97.977	Mandrillus_leucophaeus
ENSKMAG00000016118	prpf8	99	99.184	ENSMAMG00000008919	prpf8	99	99.184	Mastacembelus_armatus
ENSKMAG00000016118	prpf8	100	98.762	ENSMZEG00005015073	prpf8	99	98.762	Maylandia_zebra
ENSKMAG00000016118	prpf8	99	97.979	ENSMGAG00000004769	PRPF8	99	97.979	Meleagris_gallopavo
ENSKMAG00000016118	prpf8	99	97.977	ENSMICG00000010320	PRPF8	99	97.977	Microcebus_murinus
ENSKMAG00000016118	prpf8	99	97.977	ENSMOCG00000016838	Prpf8	99	97.977	Microtus_ochrogaster
ENSKMAG00000016118	prpf8	99	98.583	ENSMMOG00000011887	prpf8	99	98.583	Mola_mola
ENSKMAG00000016118	prpf8	99	97.852	ENSMODG00000010480	PRPF8	99	97.852	Monodelphis_domestica
ENSKMAG00000016118	prpf8	97	98.536	ENSMALG00000003558	prpf8	99	98.536	Monopterus_albus
ENSKMAG00000016118	prpf8	99	97.934	MGP_CAROLIEiJ_G0016740	Prpf8	99	97.934	Mus_caroli
ENSKMAG00000016118	prpf8	99	97.934	ENSMUSG00000020850	Prpf8	99	97.934	Mus_musculus
ENSKMAG00000016118	prpf8	99	97.891	MGP_PahariEiJ_G0017877	Prpf8	99	97.891	Mus_pahari
ENSKMAG00000016118	prpf8	99	97.934	MGP_SPRETEiJ_G0017583	Prpf8	99	97.934	Mus_spretus
ENSKMAG00000016118	prpf8	99	97.977	ENSMPUG00000013227	PRPF8	99	97.977	Mustela_putorius_furo
ENSKMAG00000016118	prpf8	99	97.850	ENSMLUG00000002666	PRPF8	99	97.850	Myotis_lucifugus
ENSKMAG00000016118	prpf8	99	96.212	ENSNGAG00000005305	Prpf8	99	96.212	Nannospalax_galili
ENSKMAG00000016118	prpf8	100	98.804	ENSNBRG00000013127	prpf8	99	98.804	Neolamprologus_brichardi
ENSKMAG00000016118	prpf8	96	96.698	ENSNLEG00000000897	PRPF8	97	96.698	Nomascus_leucogenys
ENSKMAG00000016118	prpf8	98	96.306	ENSMEUG00000015999	PRPF8	100	96.306	Notamacropus_eugenii
ENSKMAG00000016118	prpf8	99	96.470	ENSOPRG00000003102	PRPF8	99	96.714	Ochotona_princeps
ENSKMAG00000016118	prpf8	99	97.977	ENSODEG00000008468	PRPF8	99	97.977	Octodon_degus
ENSKMAG00000016118	prpf8	100	98.804	ENSONIG00000008153	prpf8	99	98.804	Oreochromis_niloticus
ENSKMAG00000016118	prpf8	82	98.972	ENSOANG00000004250	PRPF8	97	98.972	Ornithorhynchus_anatinus
ENSKMAG00000016118	prpf8	99	97.977	ENSOCUG00000000081	PRPF8	99	97.977	Oryctolagus_cuniculus
ENSKMAG00000016118	prpf8	100	98.678	ENSORLG00000008036	prpf8	99	98.678	Oryzias_latipes
ENSKMAG00000016118	prpf8	100	98.636	ENSORLG00020021070	prpf8	99	98.636	Oryzias_latipes_hni
ENSKMAG00000016118	prpf8	100	98.721	ENSORLG00015002340	prpf8	99	98.721	Oryzias_latipes_hsok
ENSKMAG00000016118	prpf8	100	97.100	ENSOMEG00000016866	prpf8	99	97.100	Oryzias_melastigma
ENSKMAG00000016118	prpf8	99	97.850	ENSOARG00000013312	PRPF8	99	97.850	Ovis_aries
ENSKMAG00000016118	prpf8	99	97.977	ENSPPAG00000042753	PRPF8	99	97.977	Pan_paniscus
ENSKMAG00000016118	prpf8	99	97.977	ENSPPRG00000008746	PRPF8	99	97.977	Panthera_pardus
ENSKMAG00000016118	prpf8	99	97.891	ENSPTIG00000019200	PRPF8	99	97.891	Panthera_tigris_altaica
ENSKMAG00000016118	prpf8	99	97.977	ENSPTRG00000039576	PRPF8	99	97.977	Pan_troglodytes
ENSKMAG00000016118	prpf8	98	98.219	ENSPANG00000024607	PRPF8	98	98.219	Papio_anubis
ENSKMAG00000016118	prpf8	99	98.416	ENSPKIG00000011201	prpf8	99	98.416	Paramormyrops_kingsleyae
ENSKMAG00000016118	prpf8	99	97.893	ENSPSIG00000013393	PRPF8	99	97.893	Pelodiscus_sinensis
ENSKMAG00000016118	prpf8	99	97.977	ENSPEMG00000021699	Prpf8	99	97.977	Peromyscus_maniculatus_bairdii
ENSKMAG00000016118	prpf8	96	93.898	ENSPMAG00000005438	prpf8	100	93.942	Petromyzon_marinus
ENSKMAG00000016118	prpf8	99	97.852	ENSPCIG00000022603	PRPF8	100	98.081	Phascolarctos_cinereus
ENSKMAG00000016118	prpf8	100	99.061	ENSPFOG00000007005	prpf8	99	99.061	Poecilia_formosa
ENSKMAG00000016118	prpf8	99	97.553	ENSPLAG00000020777	prpf8	99	97.553	Poecilia_latipinna
ENSKMAG00000016118	prpf8	100	99.061	ENSPMEG00000004051	prpf8	99	99.061	Poecilia_mexicana
ENSKMAG00000016118	prpf8	100	99.018	ENSPREG00000021902	prpf8	99	99.018	Poecilia_reticulata
ENSKMAG00000016118	prpf8	99	97.977	ENSPPYG00000007777	PRPF8	99	97.977	Pongo_abelii
ENSKMAG00000016118	prpf8	89	96.782	ENSPCAG00000008938	PRPF8	89	96.782	Procavia_capensis
ENSKMAG00000016118	prpf8	99	97.977	ENSPCOG00000015182	PRPF8	99	97.977	Propithecus_coquereli
ENSKMAG00000016118	prpf8	92	98.559	ENSPVAG00000002134	PRPF8	92	98.559	Pteropus_vampyrus
ENSKMAG00000016118	prpf8	100	98.292	ENSPNYG00000016356	prpf8	100	98.292	Pundamilia_nyererei
ENSKMAG00000016118	prpf8	99	98.841	ENSPNAG00000009247	prpf8	99	98.841	Pygocentrus_nattereri
ENSKMAG00000016118	prpf8	99	97.934	ENSRNOG00000003495	Prpf8	99	97.934	Rattus_norvegicus
ENSKMAG00000016118	prpf8	99	97.977	ENSRBIG00000031219	PRPF8	100	97.724	Rhinopithecus_bieti
ENSKMAG00000016118	prpf8	99	97.977	ENSRROG00000038014	PRPF8	100	97.724	Rhinopithecus_roxellana
ENSKMAG00000016118	prpf8	98	62.645	YHR165C	PRP8	95	62.732	Saccharomyces_cerevisiae
ENSKMAG00000016118	prpf8	99	97.977	ENSSBOG00000029717	PRPF8	99	97.977	Saimiri_boliviensis_boliviensis
ENSKMAG00000016118	prpf8	99	97.809	ENSSHAG00000006167	PRPF8	99	97.809	Sarcophilus_harrisii
ENSKMAG00000016118	prpf8	100	98.420	ENSSFOG00015013905	prpf8	100	98.420	Scleropages_formosus
ENSKMAG00000016118	prpf8	99	98.970	ENSSMAG00000017736	prpf8	99	98.970	Scophthalmus_maximus
ENSKMAG00000016118	prpf8	99	99.184	ENSSDUG00000003029	prpf8	99	99.184	Seriola_dumerili
ENSKMAG00000016118	prpf8	68	99.687	ENSSLDG00000017096	prpf8	100	99.687	Seriola_lalandi_dorsalis
ENSKMAG00000016118	prpf8	87	95.378	ENSSARG00000002892	PRPF8	87	95.378	Sorex_araneus
ENSKMAG00000016118	prpf8	99	97.435	ENSSPUG00000007463	PRPF8	99	97.435	Sphenodon_punctatus
ENSKMAG00000016118	prpf8	99	98.626	ENSSPAG00000015639	prpf8	99	98.626	Stegastes_partitus
ENSKMAG00000016118	prpf8	99	97.977	ENSSSCG00000017817	PRPF8	99	97.977	Sus_scrofa
ENSKMAG00000016118	prpf8	51	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSKMAG00000016118	prpf8	99	97.979	ENSTGUG00000005648	-	99	97.979	Taeniopygia_guttata
ENSKMAG00000016118	prpf8	99	98.713	ENSTRUG00000015906	prpf8	99	98.713	Takifugu_rubripes
ENSKMAG00000016118	prpf8	94	99.462	ENSTNIG00000003460	prpf8	99	99.462	Tetraodon_nigroviridis
ENSKMAG00000016118	prpf8	88	98.911	ENSTBEG00000006431	PRPF8	89	98.911	Tupaia_belangeri
ENSKMAG00000016118	prpf8	99	97.417	ENSTTRG00000006869	PRPF8	99	97.417	Tursiops_truncatus
ENSKMAG00000016118	prpf8	53	97.193	ENSUAMG00000015644	-	95	97.193	Ursus_americanus
ENSKMAG00000016118	prpf8	99	97.718	ENSUMAG00000009385	PRPF8	99	97.718	Ursus_maritimus
ENSKMAG00000016118	prpf8	70	98.621	ENSVPAG00000006063	-	70	98.621	Vicugna_pacos
ENSKMAG00000016118	prpf8	99	97.065	ENSVVUG00000021695	PRPF8	99	97.065	Vulpes_vulpes
ENSKMAG00000016118	prpf8	99	97.852	ENSXETG00000022259	prpf8	99	97.852	Xenopus_tropicalis
ENSKMAG00000016118	prpf8	99	98.760	ENSXCOG00000012775	prpf8	99	98.760	Xiphophorus_couchianus
ENSKMAG00000016118	prpf8	99	98.717	ENSXMAG00000008505	prpf8	99	98.717	Xiphophorus_maculatus