EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016179 (Gene tree)
Gene ID: 108247172
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 13358 bases
Position: chrLWHD01000256.1:368301-381658
Accession: 108247172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021772	KH_1	PF00013.29	1.3e-38	1	2
ENSKMAP00000021772	KH_1	PF00013.29	1.3e-38	2	2
ENSKMAP00000021780	KH_1	PF00013.29	1e-36	1	2
ENSKMAP00000021780	KH_1	PF00013.29	1e-36	2	2
ENSKMAP00000021780	KH_2	PF07650.17	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022053	-	1005	-	ENSKMAP00000021772	334 (aa)	-	-
ENSKMAT00000022061	-	1438	XM_017435095	ENSKMAP00000021780	205 (aa)	XP_017290584	-

Gene Model

Click here to download ENSKMAG00000016179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016179	-	85	74.713	ENSKMAG00000017554	-	93	48.913
ENSKMAG00000016179	-	93	72.959	ENSKMAG00000011367	-	91	74.857
ENSKMAG00000016179	-	85	77.011	ENSKMAG00000014252	pcbp4	72	74.126
ENSKMAG00000016179	-	71	30.872	ENSKMAG00000018897	fubp1	50	30.872
ENSKMAG00000016179	-	87	83.146	ENSKMAG00000018530	-	74	83.146
ENSKMAG00000016179	-	91	42.188	ENSKMAG00000014225	nova1	66	42.188
ENSKMAG00000016179	-	77	38.356	ENSKMAG00000015047	-	88	35.616
ENSKMAG00000016179	-	70	30.872	ENSKMAG00000021164	-	58	30.872
ENSKMAG00000016179	-	80	31.013	ENSKMAG00000016694	igf2bp1	61	31.013
ENSKMAG00000016179	-	86	84.659	ENSKMAG00000003046	pcbp3	66	84.659
ENSKMAG00000016179	-	93	73.469	ENSKMAG00000012031	PCBP2	95	75.429
ENSKMAG00000016179	-	92	38.028	ENSKMAG00000012177	igf2bp2b	58	35.461
ENSKMAG00000016179	-	86	32.955	ENSKMAG00000019838	igf2bp3	67	32.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016179	-	86	85.227	ENSG00000183570	PCBP3	90	83.537	Homo_sapiens
ENSKMAG00000016179	-	95	96.410	ENSAPOG00000023735	zgc:110045	92	96.410	Acanthochromis_polyacanthus
ENSKMAG00000016179	-	98	90.050	ENSACIG00000002577	zgc:110045	88	91.282	Amphilophus_citrinellus
ENSKMAG00000016179	-	96	91.878	ENSAOCG00000005266	zgc:110045	92	91.878	Amphiprion_ocellaris
ENSKMAG00000016179	-	95	95.385	ENSAPEG00000000729	zgc:110045	96	82.899	Amphiprion_percula
ENSKMAG00000016179	-	100	84.706	ENSATEG00000011191	zgc:110045	100	84.706	Anabas_testudineus
ENSKMAG00000016179	-	95	95.897	ENSACLG00000019285	zgc:110045	97	82.319	Astatotilapia_calliptera
ENSKMAG00000016179	-	86	85.227	ENSBTAG00000030775	PCBP3	75	85.227	Bos_taurus
ENSKMAG00000016179	-	90	80.952	ENSCAFG00000011907	PCBP3	76	80.952	Canis_familiaris
ENSKMAG00000016179	-	90	76.720	ENSCHIG00000015841	PCBP3	75	76.720	Capra_hircus
ENSKMAG00000016179	-	99	72.414	ENSTSYG00000005254	PCBP3	75	72.414	Carlito_syrichta
ENSKMAG00000016179	-	86	57.062	ENSCAPG00000006767	PCBP3	65	59.244	Cavia_aperea
ENSKMAG00000016179	-	90	80.952	ENSCPOG00000003648	PCBP3	76	80.952	Cavia_porcellus
ENSKMAG00000016179	-	90	80.952	ENSCCAG00000024561	PCBP3	83	83.537	Cebus_capucinus
ENSKMAG00000016179	-	90	80.952	ENSCATG00000038419	PCBP3	83	83.537	Cercocebus_atys
ENSKMAG00000016179	-	90	80.952	ENSCLAG00000006667	PCBP3	76	80.952	Chinchilla_lanigera
ENSKMAG00000016179	-	90	80.952	ENSCANG00000026757	PCBP3	83	83.537	Colobus_angolensis_palliatus
ENSKMAG00000016179	-	90	80.952	ENSCGRG00001006836	Pcbp3	76	80.952	Cricetulus_griseus_chok1gshd
ENSKMAG00000016179	-	90	80.952	ENSCGRG00000001837	Pcbp3	76	80.952	Cricetulus_griseus_crigri
ENSKMAG00000016179	-	99	91.176	ENSCSEG00000010020	zgc:110045	96	94.359	Cynoglossus_semilaevis
ENSKMAG00000016179	-	97	91.919	ENSCVAG00000004726	zgc:110045	89	91.919	Cyprinodon_variegatus
ENSKMAG00000016179	-	94	84.375	ENSDARG00000057141	zgc:110045	86	84.375	Danio_rerio
ENSKMAG00000016179	-	90	80.952	ENSDNOG00000049518	PCBP3	68	80.952	Dasypus_novemcinctus
ENSKMAG00000016179	-	99	72.906	ENSDORG00000003640	Pcbp3	77	72.906	Dipodomys_ordii
ENSKMAG00000016179	-	86	80.682	ENSEBUG00000009697	zgc:110045	78	82.166	Eptatretus_burgeri
ENSKMAG00000016179	-	90	80.952	ENSEASG00005007068	PCBP3	72	80.952	Equus_asinus_asinus
ENSKMAG00000016179	-	90	80.952	ENSECAG00000012413	PCBP3	72	80.952	Equus_caballus
ENSKMAG00000016179	-	93	89.474	ENSELUG00000019784	zgc:110045	97	74.928	Esox_lucius
ENSKMAG00000016179	-	90	80.952	ENSFCAG00000014812	PCBP3	83	83.537	Felis_catus
ENSKMAG00000016179	-	90	80.952	ENSFDAG00000009117	PCBP3	72	80.952	Fukomys_damarensis
ENSKMAG00000016179	-	99	90.099	ENSFHEG00000018838	-	93	90.099	Fundulus_heteroclitus
ENSKMAG00000016179	-	91	92.553	ENSGMOG00000005953	zgc:110045	97	92.553	Gadus_morhua
ENSKMAG00000016179	-	76	81.122	ENSGAFG00000017860	-	100	81.122	Gambusia_affinis
ENSKMAG00000016179	-	95	95.385	ENSGAFG00000017864	zgc:110045	86	95.385	Gambusia_affinis
ENSKMAG00000016179	-	95	92.857	ENSGACG00000003044	zgc:110045	93	92.857	Gasterosteus_aculeatus
ENSKMAG00000016179	-	90	80.952	ENSGGOG00000003683	PCBP3	83	83.537	Gorilla_gorilla
ENSKMAG00000016179	-	95	95.897	ENSHBUG00000012495	zgc:110045	92	95.897	Haplochromis_burtoni
ENSKMAG00000016179	-	90	80.952	ENSHGLG00000018620	PCBP3	68	80.952	Heterocephalus_glaber_female
ENSKMAG00000016179	-	90	80.952	ENSHGLG00100013590	PCBP3	68	80.952	Heterocephalus_glaber_male
ENSKMAG00000016179	-	94	92.708	ENSHCOG00000000818	zgc:110045	91	87.437	Hippocampus_comes
ENSKMAG00000016179	-	95	80.412	ENSIPUG00000003932	zgc:110045	72	80.412	Ictalurus_punctatus
ENSKMAG00000016179	-	90	80.952	ENSSTOG00000007178	PCBP3	76	80.952	Ictidomys_tridecemlineatus
ENSKMAG00000016179	-	90	80.952	ENSJJAG00000021192	Pcbp3	68	80.952	Jaculus_jaculus
ENSKMAG00000016179	-	97	93.970	ENSLBEG00000023074	zgc:110045	87	89.744	Labrus_bergylta
ENSKMAG00000016179	-	90	77.778	ENSLAFG00000020835	PCBP3	93	68.161	Loxodonta_africana
ENSKMAG00000016179	-	90	80.952	ENSMFAG00000034574	PCBP3	83	83.537	Macaca_fascicularis
ENSKMAG00000016179	-	90	80.952	ENSMMUG00000003825	PCBP3	83	83.537	Macaca_mulatta
ENSKMAG00000016179	-	90	80.952	ENSMNEG00000035551	PCBP3	83	83.537	Macaca_nemestrina
ENSKMAG00000016179	-	90	80.952	ENSMLEG00000038785	PCBP3	83	83.537	Mandrillus_leucophaeus
ENSKMAG00000016179	-	95	94.872	ENSMAMG00000014389	zgc:110045	95	94.872	Mastacembelus_armatus
ENSKMAG00000016179	-	95	95.897	ENSMZEG00005011785	zgc:110045	97	82.319	Maylandia_zebra
ENSKMAG00000016179	-	90	80.952	ENSMAUG00000007036	Pcbp3	76	80.952	Mesocricetus_auratus
ENSKMAG00000016179	-	90	80.423	ENSMICG00000012679	PCBP3	83	82.927	Microcebus_murinus
ENSKMAG00000016179	-	90	80.952	ENSMOCG00000016127	Pcbp3	76	80.952	Microtus_ochrogaster
ENSKMAG00000016179	-	75	84.817	ENSMMOG00000008398	-	100	84.817	Mola_mola
ENSKMAG00000016179	-	96	89.340	ENSMMOG00000008399	zgc:110045	93	89.340	Mola_mola
ENSKMAG00000016179	-	74	85.204	ENSMALG00000008782	-	99	85.204	Monopterus_albus
ENSKMAG00000016179	-	94	88.083	ENSMALG00000008763	zgc:110045	93	88.083	Monopterus_albus
ENSKMAG00000016179	-	90	80.952	MGP_CAROLIEiJ_G0015475	Pcbp3	84	80.952	Mus_caroli
ENSKMAG00000016179	-	90	80.952	ENSMUSG00000001120	Pcbp3	84	80.952	Mus_musculus
ENSKMAG00000016179	-	86	85.227	MGP_PahariEiJ_G0030889	Pcbp3	84	80.952	Mus_pahari
ENSKMAG00000016179	-	86	85.227	MGP_SPRETEiJ_G0016288	Pcbp3	84	80.952	Mus_spretus
ENSKMAG00000016179	-	90	80.952	ENSMLUG00000003074	PCBP3	76	80.952	Myotis_lucifugus
ENSKMAG00000016179	-	90	80.952	ENSNGAG00000005416	Pcbp3	76	80.952	Nannospalax_galili
ENSKMAG00000016179	-	95	95.897	ENSNBRG00000017646	zgc:110045	96	82.319	Neolamprologus_brichardi
ENSKMAG00000016179	-	90	80.952	ENSNLEG00000002639	PCBP3	83	83.537	Nomascus_leucogenys
ENSKMAG00000016179	-	86	85.227	ENSMEUG00000012960	PCBP3	94	53.208	Notamacropus_eugenii
ENSKMAG00000016179	-	90	76.720	ENSODEG00000012873	PCBP3	76	76.720	Octodon_degus
ENSKMAG00000016179	-	95	95.897	ENSONIG00000010370	zgc:110045	96	77.647	Oreochromis_niloticus
ENSKMAG00000016179	-	86	85.227	ENSOANG00000006265	PCBP3	62	85.227	Ornithorhynchus_anatinus
ENSKMAG00000016179	-	95	96.923	ENSORLG00000014385	-	96	78.841	Oryzias_latipes
ENSKMAG00000016179	-	95	96.410	ENSORLG00020003139	zgc:110045	96	79.070	Oryzias_latipes_hni
ENSKMAG00000016179	-	95	97.436	ENSOMEG00000015459	-	96	79.420	Oryzias_melastigma
ENSKMAG00000016179	-	86	80.114	ENSOARG00000012704	PCBP3	86	62.656	Ovis_aries
ENSKMAG00000016179	-	90	80.952	ENSPPAG00000021940	PCBP3	83	83.537	Pan_paniscus
ENSKMAG00000016179	-	90	80.952	ENSPPRG00000003933	PCBP3	83	83.537	Panthera_pardus
ENSKMAG00000016179	-	90	58.031	ENSPTIG00000012038	PCBP3	83	58.947	Panthera_tigris_altaica
ENSKMAG00000016179	-	95	45.771	ENSPTRG00000014010	PCBP3	79	45.771	Pan_troglodytes
ENSKMAG00000016179	-	90	80.952	ENSPANG00000023631	PCBP3	83	83.537	Papio_anubis
ENSKMAG00000016179	-	84	63.218	ENSPMGG00000022531	-	77	63.218	Periophthalmus_magnuspinnatus
ENSKMAG00000016179	-	95	83.077	ENSPMGG00000021588	-	80	70.201	Periophthalmus_magnuspinnatus
ENSKMAG00000016179	-	90	80.952	ENSPEMG00000000587	Pcbp3	76	80.952	Peromyscus_maniculatus_bairdii
ENSKMAG00000016179	-	73	68.333	ENSPMAG00000004719	zgc:110045	94	68.333	Petromyzon_marinus
ENSKMAG00000016179	-	95	95.385	ENSPFOG00000002348	zgc:110045	93	95.385	Poecilia_formosa
ENSKMAG00000016179	-	95	90.769	ENSPLAG00000017488	zgc:110045	85	90.769	Poecilia_latipinna
ENSKMAG00000016179	-	98	94.527	ENSPMEG00000012762	zgc:110045	89	94.527	Poecilia_mexicana
ENSKMAG00000016179	-	95	94.872	ENSPREG00000001797	zgc:110045	86	94.872	Poecilia_reticulata
ENSKMAG00000016179	-	86	80.814	ENSPPYG00000011525	-	66	80.814	Pongo_abelii
ENSKMAG00000016179	-	84	67.442	ENSPCAG00000001454	PCBP3	76	53.992	Procavia_capensis
ENSKMAG00000016179	-	90	80.423	ENSPCOG00000013797	PCBP3	83	82.927	Propithecus_coquereli
ENSKMAG00000016179	-	86	84.659	ENSPVAG00000000832	PCBP3	53	85.366	Pteropus_vampyrus
ENSKMAG00000016179	-	95	91.282	ENSPNYG00000004637	zgc:110045	88	91.282	Pundamilia_nyererei
ENSKMAG00000016179	-	76	88.265	ENSPNYG00000004656	-	98	88.265	Pundamilia_nyererei
ENSKMAG00000016179	-	94	82.812	ENSPNAG00000004501	zgc:110045	86	82.812	Pygocentrus_nattereri
ENSKMAG00000016179	-	90	80.952	ENSRROG00000034567	PCBP3	83	83.537	Rhinopithecus_roxellana
ENSKMAG00000016179	-	90	80.952	ENSSBOG00000005789	PCBP3	83	83.537	Saimiri_boliviensis_boliviensis
ENSKMAG00000016179	-	95	95.897	ENSSMAG00000013541	zgc:110045	100	82.267	Scophthalmus_maximus
ENSKMAG00000016179	-	92	96.429	ENSSDUG00000019371	zgc:110045	100	82.029	Seriola_dumerili
ENSKMAG00000016179	-	95	96.410	ENSSLDG00000021064	zgc:110045	96	81.739	Seriola_lalandi_dorsalis
ENSKMAG00000016179	-	67	79.562	ENSSARG00000007629	-	68	79.562	Sorex_araneus
ENSKMAG00000016179	-	95	96.410	ENSSPAG00000000563	zgc:110045	92	96.410	Stegastes_partitus
ENSKMAG00000016179	-	90	80.952	ENSSSCG00000023041	PCBP3	72	80.952	Sus_scrofa
ENSKMAG00000016179	-	94	91.192	ENSTRUG00000017789	zgc:110045	95	91.192	Takifugu_rubripes
ENSKMAG00000016179	-	76	83.163	ENSTRUG00000023273	-	99	83.163	Takifugu_rubripes
ENSKMAG00000016179	-	92	86.979	ENSTNIG00000003546	zgc:110045	95	86.979	Tetraodon_nigroviridis
ENSKMAG00000016179	-	90	58.201	ENSTBEG00000011882	-	59	58.201	Tupaia_belangeri
ENSKMAG00000016179	-	90	76.720	ENSUAMG00000006491	PCBP3	92	82.443	Ursus_americanus
ENSKMAG00000016179	-	93	70.707	ENSUMAG00000025403	PCBP3	79	70.707	Ursus_maritimus
ENSKMAG00000016179	-	90	75.661	ENSVVUG00000023862	PCBP3	74	58.130	Vulpes_vulpes
ENSKMAG00000016179	-	74	98.824	ENSXCOG00000005968	zgc:110045	89	98.824	Xiphophorus_couchianus
ENSKMAG00000016179	-	95	95.385	ENSXMAG00000008030	zgc:110045	96	78.551	Xiphophorus_maculatus