EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016247 (Gene tree)
Gene ID: 108233381
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 1-like
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 8962 bases
Position: chrLWHD01000021.1:518953-527914
Accession: 108233381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021861	zf-C2H2	PF00096.26	2.7e-15	1	3
ENSKMAP00000021861	zf-C2H2	PF00096.26	2.7e-15	2	3
ENSKMAP00000021861	zf-C2H2	PF00096.26	2.7e-15	3	3
ENSKMAP00000021861	zf-met	PF12874.7	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022142	-	2984	XM_017411800	ENSKMAP00000021861	781 (aa)	XP_017267289	UPI0007F89A74

Gene Model

Click here to download ENSKMAG00000016247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016247	-	78	37.838	ENSKMAG00000011218	prdm1b	91	37.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016247	-	99	73.537	ENSAPOG00000014135	-	99	73.537	Acanthochromis_polyacanthus
ENSKMAG00000016247	-	99	70.865	ENSACIG00000009747	-	99	70.865	Amphilophus_citrinellus
ENSKMAG00000016247	-	74	38.274	ENSACIG00000014426	prdm1b	88	38.274	Amphilophus_citrinellus
ENSKMAG00000016247	-	53	56.442	ENSAPEG00000019826	prdm1b	90	41.026	Amphiprion_percula
ENSKMAG00000016247	-	99	33.518	ENSATEG00000021017	prdm1a	98	41.780	Anabas_testudineus
ENSKMAG00000016247	-	78	37.730	ENSATEG00000006924	prdm1b	88	38.934	Anabas_testudineus
ENSKMAG00000016247	-	98	69.897	ENSATEG00000014034	-	99	69.897	Anabas_testudineus
ENSKMAG00000016247	-	75	38.424	ENSACLG00000005487	prdm1b	85	38.424	Astatotilapia_calliptera
ENSKMAG00000016247	-	99	41.648	ENSCSEG00000009707	prdm1a	99	42.946	Cynoglossus_semilaevis
ENSKMAG00000016247	-	99	42.197	ENSCVAG00000019081	prdm1a	98	43.625	Cyprinodon_variegatus
ENSKMAG00000016247	-	88	30.907	ENSCVAG00000016746	prdm1b	90	39.415	Cyprinodon_variegatus
ENSKMAG00000016247	-	76	38.537	ENSFHEG00000019848	prdm1b	89	38.537	Fundulus_heteroclitus
ENSKMAG00000016247	-	100	72.994	ENSGAFG00000013012	-	100	72.994	Gambusia_affinis
ENSKMAG00000016247	-	87	40.309	ENSGAFG00000016191	prdm1b	88	39.614	Gambusia_affinis
ENSKMAG00000016247	-	75	38.843	ENSHBUG00000001475	prdm1b	90	38.843	Haplochromis_burtoni
ENSKMAG00000016247	-	86	39.356	ENSLBEG00000020955	prdm1b	88	39.356	Labrus_bergylta
ENSKMAG00000016247	-	95	38.279	ENSLOCG00000004978	prdm1b	96	38.232	Lepisosteus_oculatus
ENSKMAG00000016247	-	77	37.876	ENSMZEG00005026361	prdm1b	89	37.876	Maylandia_zebra
ENSKMAG00000016247	-	75	38.088	ENSMMOG00000013458	prdm1b	90	38.088	Mola_mola
ENSKMAG00000016247	-	98	69.819	ENSMALG00000000462	-	100	69.819	Monopterus_albus
ENSKMAG00000016247	-	79	36.810	ENSMALG00000011410	prdm1b	95	36.753	Monopterus_albus
ENSKMAG00000016247	-	99	70.229	ENSONIG00000014709	-	99	70.229	Oreochromis_niloticus
ENSKMAG00000016247	-	68	58.282	ENSONIG00000013583	prdm1b	68	58.282	Oreochromis_niloticus
ENSKMAG00000016247	-	74	37.361	ENSORLG00000010025	prdm1b	90	37.997	Oryzias_latipes
ENSKMAG00000016247	-	74	38.035	ENSORLG00015009022	prdm1b	89	38.193	Oryzias_latipes_hsok
ENSKMAG00000016247	-	50	57.642	ENSPKIG00000022335	prdm1b	62	57.055	Paramormyrops_kingsleyae
ENSKMAG00000016247	-	85	41.643	ENSPFOG00000003103	prdm1b	98	41.643	Poecilia_formosa
ENSKMAG00000016247	-	75	37.886	ENSPLAG00000018491	prdm1b	87	37.886	Poecilia_latipinna
ENSKMAG00000016247	-	75	38.259	ENSPMEG00000007869	prdm1b	88	38.259	Poecilia_mexicana
ENSKMAG00000016247	-	87	41.477	ENSPREG00000011327	prdm1b	86	41.477	Poecilia_reticulata
ENSKMAG00000016247	-	94	42.857	ENSPVAG00000011732	PRDM1	99	42.893	Pteropus_vampyrus
ENSKMAG00000016247	-	99	42.681	ENSPNAG00000028442	prdm1a	96	42.681	Pygocentrus_nattereri
ENSKMAG00000016247	-	71	54.491	ENSSFOG00015021896	prdm1b	78	54.491	Scleropages_formosus
ENSKMAG00000016247	-	99	67.681	ENSSMAG00000017518	-	99	67.681	Scophthalmus_maximus
ENSKMAG00000016247	-	52	55.828	ENSSMAG00000020467	prdm1b	92	38.881	Scophthalmus_maximus
ENSKMAG00000016247	-	99	72.911	ENSSDUG00000000524	-	99	72.911	Seriola_dumerili
ENSKMAG00000016247	-	74	39.309	ENSSDUG00000020610	prdm1b	87	39.309	Seriola_dumerili
ENSKMAG00000016247	-	99	72.532	ENSSLDG00000001957	-	99	72.532	Seriola_lalandi_dorsalis
ENSKMAG00000016247	-	86	40.942	ENSSLDG00000021973	prdm1b	88	40.942	Seriola_lalandi_dorsalis
ENSKMAG00000016247	-	99	73.571	ENSSPAG00000009830	-	99	73.571	Stegastes_partitus
ENSKMAG00000016247	-	73	39.799	ENSSPAG00000000803	prdm1b	95	38.953	Stegastes_partitus
ENSKMAG00000016247	-	87	40.517	ENSXCOG00000018920	prdm1b	91	40.517	Xiphophorus_couchianus
ENSKMAG00000016247	-	87	40.331	ENSXMAG00000016765	prdm1b	88	38.861	Xiphophorus_maculatus