EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016292 (Gene tree)
Gene ID: 108250766
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 10124 bases
Position: chrLWHD01000689.1:70997-81120
Accession: 108250766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000021932	Symplekin_C	PF12295.8	3.3e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022214	-	4358	XM_017440794	ENSKMAP00000021932	1221 (aa)	XP_017296283	UPI0007F91A59

Gene Model

Click here to download ENSKMAG00000016292's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03015	mRNA surveillance pathway	KEGG
kmr04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016292	sympk	98	70.515	ENSG00000125755	SYMPK	86	83.607	Homo_sapiens
ENSKMAG00000016292	sympk	99	88.471	ENSAPOG00000015934	sympk	100	88.307	Acanthochromis_polyacanthus
ENSKMAG00000016292	sympk	90	75.296	ENSAMEG00000000680	SYMPK	86	75.296	Ailuropoda_melanoleuca
ENSKMAG00000016292	sympk	89	92.059	ENSACIG00000006357	sympk	99	84.954	Amphilophus_citrinellus
ENSKMAG00000016292	sympk	96	89.541	ENSAOCG00000024124	sympk	100	88.144	Amphiprion_ocellaris
ENSKMAG00000016292	sympk	99	87.081	ENSAPEG00000003465	sympk	100	87.980	Amphiprion_percula
ENSKMAG00000016292	sympk	99	86.738	ENSATEG00000008472	sympk	99	86.491	Anabas_testudineus
ENSKMAG00000016292	sympk	81	74.498	ENSACAG00000004126	SYMPK	83	73.978	Anolis_carolinensis
ENSKMAG00000016292	sympk	90	75.228	ENSANAG00000021087	SYMPK	97	75.694	Aotus_nancymaae
ENSKMAG00000016292	sympk	93	89.661	ENSACLG00000001813	sympk	100	86.367	Astatotilapia_calliptera
ENSKMAG00000016292	sympk	91	81.940	ENSAMXG00000013677	sympk	89	84.066	Astyanax_mexicanus
ENSKMAG00000016292	sympk	90	75.114	ENSBTAG00000012101	SYMPK	86	75.046	Bos_taurus
ENSKMAG00000016292	sympk	90	75.023	ENSCJAG00000012172	SYMPK	97	74.067	Callithrix_jacchus
ENSKMAG00000016292	sympk	90	75.114	ENSCAFG00000004376	SYMPK	86	75.114	Canis_familiaris
ENSKMAG00000016292	sympk	90	75.114	ENSCAFG00020001815	SYMPK	86	75.114	Canis_lupus_dingo
ENSKMAG00000016292	sympk	90	75.205	ENSCHIG00000026784	SYMPK	86	75.137	Capra_hircus
ENSKMAG00000016292	sympk	90	75.319	ENSTSYG00000006268	SYMPK	95	74.074	Carlito_syrichta
ENSKMAG00000016292	sympk	86	73.124	ENSCAPG00000005112	SYMPK	94	73.124	Cavia_aperea
ENSKMAG00000016292	sympk	91	73.975	ENSCPOG00000010434	SYMPK	88	74.772	Cavia_porcellus
ENSKMAG00000016292	sympk	90	75.228	ENSCCAG00000036309	SYMPK	97	75.379	Cebus_capucinus
ENSKMAG00000016292	sympk	97	71.429	ENSCATG00000045107	SYMPK	98	75.355	Cercocebus_atys
ENSKMAG00000016292	sympk	94	72.241	ENSCLAG00000001206	SYMPK	86	74.772	Chinchilla_lanigera
ENSKMAG00000016292	sympk	90	75.228	ENSCSAG00000003115	SYMPK	86	74.954	Chlorocebus_sabaeus
ENSKMAG00000016292	sympk	68	90.909	ENSCHOG00000012456	SYMPK	75	90.909	Choloepus_hoffmanni
ENSKMAG00000016292	sympk	89	75.114	ENSCPBG00000007170	SYMPK	87	74.818	Chrysemys_picta_bellii
ENSKMAG00000016292	sympk	86	48.820	ENSCING00000021232	-	96	48.256	Ciona_intestinalis
ENSKMAG00000016292	sympk	85	47.842	ENSCSAVG00000005154	-	99	48.030	Ciona_savignyi
ENSKMAG00000016292	sympk	97	70.851	ENSCANG00000040907	SYMPK	96	74.074	Colobus_angolensis_palliatus
ENSKMAG00000016292	sympk	84	73.684	ENSCGRG00001010086	Sympk	83	74.730	Cricetulus_griseus_chok1gshd
ENSKMAG00000016292	sympk	98	86.167	ENSCSEG00000016802	sympk	100	84.459	Cynoglossus_semilaevis
ENSKMAG00000016292	sympk	98	77.705	ENSDARG00000059553	sympk	99	75.543	Danio_rerio
ENSKMAG00000016292	sympk	90	74.681	ENSDNOG00000016149	SYMPK	85	74.408	Dasypus_novemcinctus
ENSKMAG00000016292	sympk	86	37.268	FBgn0037371	Sym	91	37.130	Drosophila_melanogaster
ENSKMAG00000016292	sympk	71	59.572	ENSEBUG00000000387	sympk	88	60.301	Eptatretus_burgeri
ENSKMAG00000016292	sympk	90	75.205	ENSEASG00005014227	SYMPK	86	75.137	Equus_asinus_asinus
ENSKMAG00000016292	sympk	90	75.205	ENSECAG00000008163	SYMPK	86	75.137	Equus_caballus
ENSKMAG00000016292	sympk	70	75.000	ENSEEUG00000000270	-	78	75.000	Erinaceus_europaeus
ENSKMAG00000016292	sympk	99	80.386	ENSELUG00000000850	sympk	98	80.403	Esox_lucius
ENSKMAG00000016292	sympk	92	73.801	ENSFCAG00000007337	SYMPK	86	75.114	Felis_catus
ENSKMAG00000016292	sympk	91	73.812	ENSFDAG00000011272	SYMPK	86	74.499	Fukomys_damarensis
ENSKMAG00000016292	sympk	99	86.639	ENSFHEG00000010274	sympk	100	86.475	Fundulus_heteroclitus
ENSKMAG00000016292	sympk	89	83.687	ENSGMOG00000002357	sympk	99	83.410	Gadus_morhua
ENSKMAG00000016292	sympk	91	89.883	ENSGAFG00000010976	sympk	100	84.271	Gambusia_affinis
ENSKMAG00000016292	sympk	99	84.349	ENSGACG00000002735	sympk	98	88.869	Gasterosteus_aculeatus
ENSKMAG00000016292	sympk	65	67.677	ENSGAGG00000012538	-	88	72.989	Gopherus_agassizii
ENSKMAG00000016292	sympk	98	70.598	ENSGGOG00000003410	SYMPK	95	75.598	Gorilla_gorilla
ENSKMAG00000016292	sympk	93	89.661	ENSHBUG00000023564	sympk	100	86.367	Haplochromis_burtoni
ENSKMAG00000016292	sympk	90	70.738	ENSHGLG00000005228	SYMPK	86	70.674	Heterocephalus_glaber_female
ENSKMAG00000016292	sympk	92	73.623	ENSHGLG00100018571	SYMPK	88	74.932	Heterocephalus_glaber_male
ENSKMAG00000016292	sympk	90	83.638	ENSHCOG00000017400	sympk	91	83.547	Hippocampus_comes
ENSKMAG00000016292	sympk	98	77.414	ENSIPUG00000024020	SYMPK	88	83.516	Ictalurus_punctatus
ENSKMAG00000016292	sympk	90	74.572	ENSSTOG00000001534	SYMPK	86	75.114	Ictidomys_tridecemlineatus
ENSKMAG00000016292	sympk	91	74.352	ENSJJAG00000006633	Sympk	86	74.772	Jaculus_jaculus
ENSKMAG00000016292	sympk	99	86.018	ENSLBEG00000027913	sympk	100	85.481	Labrus_bergylta
ENSKMAG00000016292	sympk	89	69.224	ENSLACG00000016497	SYMPK	91	70.255	Latimeria_chalumnae
ENSKMAG00000016292	sympk	90	75.114	ENSLAFG00000008726	SYMPK	86	75.046	Loxodonta_africana
ENSKMAG00000016292	sympk	90	75.228	ENSMMUG00000015428	SYMPK	93	73.937	Macaca_mulatta
ENSKMAG00000016292	sympk	97	71.657	ENSMNEG00000019439	SYMPK	98	75.450	Macaca_nemestrina
ENSKMAG00000016292	sympk	97	71.741	ENSMLEG00000040508	SYMPK	98	75.355	Mandrillus_leucophaeus
ENSKMAG00000016292	sympk	99	86.853	ENSMAMG00000010486	sympk	99	86.914	Mastacembelus_armatus
ENSKMAG00000016292	sympk	93	89.661	ENSMZEG00005014146	sympk	100	86.367	Maylandia_zebra
ENSKMAG00000016292	sympk	89	74.262	ENSMAUG00000015657	Sympk	85	74.262	Mesocricetus_auratus
ENSKMAG00000016292	sympk	90	75.046	ENSMICG00000001871	SYMPK	90	73.817	Microcebus_murinus
ENSKMAG00000016292	sympk	90	74.589	ENSMOCG00000008388	Sympk	85	74.589	Microtus_ochrogaster
ENSKMAG00000016292	sympk	99	82.787	ENSMMOG00000019227	sympk	100	82.787	Mola_mola
ENSKMAG00000016292	sympk	89	75.780	ENSMODG00000021534	SYMPK	95	69.779	Monodelphis_domestica
ENSKMAG00000016292	sympk	77	87.114	ENSMALG00000008347	sympk	96	87.220	Monopterus_albus
ENSKMAG00000016292	sympk	99	69.967	MGP_CAROLIEiJ_G0029267	Sympk	77	84.404	Mus_caroli
ENSKMAG00000016292	sympk	90	74.771	ENSMUSG00000023118	Sympk	76	84.404	Mus_musculus
ENSKMAG00000016292	sympk	90	74.771	MGP_PahariEiJ_G0021127	Sympk	77	84.404	Mus_pahari
ENSKMAG00000016292	sympk	90	74.863	MGP_SPRETEiJ_G0030351	-	77	84.404	Mus_spretus
ENSKMAG00000016292	sympk	90	73.929	ENSMPUG00000005505	SYMPK	85	73.929	Mustela_putorius_furo
ENSKMAG00000016292	sympk	73	71.861	ENSMLUG00000001359	SYMPK	89	71.861	Myotis_lucifugus
ENSKMAG00000016292	sympk	90	74.771	ENSNGAG00000000820	Sympk	85	74.771	Nannospalax_galili
ENSKMAG00000016292	sympk	90	90.072	ENSNBRG00000018101	sympk	95	89.746	Neolamprologus_brichardi
ENSKMAG00000016292	sympk	90	58.954	ENSNLEG00000002369	SYMPK	85	63.782	Nomascus_leucogenys
ENSKMAG00000016292	sympk	75	66.381	ENSMEUG00000003866	SYMPK	65	83.898	Notamacropus_eugenii
ENSKMAG00000016292	sympk	90	73.063	ENSOPRG00000009967	SYMPK	85	73.670	Ochotona_princeps
ENSKMAG00000016292	sympk	97	71.429	ENSODEG00000007519	SYMPK	86	74.840	Octodon_degus
ENSKMAG00000016292	sympk	93	89.694	ENSONIG00000016802	sympk	99	89.113	Oreochromis_niloticus
ENSKMAG00000016292	sympk	78	73.739	ENSOCUG00000005511	SYMPK	88	73.739	Oryctolagus_cuniculus
ENSKMAG00000016292	sympk	99	86.031	ENSORLG00000015338	sympk	97	89.540	Oryzias_latipes
ENSKMAG00000016292	sympk	99	86.113	ENSORLG00020004402	sympk	99	85.949	Oryzias_latipes_hni
ENSKMAG00000016292	sympk	99	85.949	ENSORLG00015005712	sympk	99	85.785	Oryzias_latipes_hsok
ENSKMAG00000016292	sympk	99	86.589	ENSOMEG00000022561	sympk	100	85.820	Oryzias_melastigma
ENSKMAG00000016292	sympk	90	75.114	ENSOGAG00000013483	SYMPK	86	75.114	Otolemur_garnettii
ENSKMAG00000016292	sympk	89	72.385	ENSOARG00000010349	SYMPK	85	72.385	Ovis_aries
ENSKMAG00000016292	sympk	98	70.515	ENSPPAG00000043204	SYMPK	94	73.800	Pan_paniscus
ENSKMAG00000016292	sympk	90	75.205	ENSPPRG00000004282	SYMPK	86	75.205	Panthera_pardus
ENSKMAG00000016292	sympk	92	73.890	ENSPTIG00000015420	SYMPK	92	75.205	Panthera_tigris_altaica
ENSKMAG00000016292	sympk	98	70.515	ENSPTRG00000011169	SYMPK	94	73.800	Pan_troglodytes
ENSKMAG00000016292	sympk	90	75.228	ENSPANG00000019930	SYMPK	98	75.355	Papio_anubis
ENSKMAG00000016292	sympk	90	84.011	ENSPKIG00000017132	sympk	93	80.543	Paramormyrops_kingsleyae
ENSKMAG00000016292	sympk	90	74.499	ENSPEMG00000007564	Sympk	85	74.499	Peromyscus_maniculatus_bairdii
ENSKMAG00000016292	sympk	84	64.464	ENSPMAG00000004936	sympk	100	64.943	Petromyzon_marinus
ENSKMAG00000016292	sympk	97	71.851	ENSPCIG00000024476	SYMPK	89	73.440	Phascolarctos_cinereus
ENSKMAG00000016292	sympk	91	89.767	ENSPFOG00000001194	sympk	100	84.352	Poecilia_formosa
ENSKMAG00000016292	sympk	91	89.767	ENSPLAG00000012995	sympk	100	84.352	Poecilia_latipinna
ENSKMAG00000016292	sympk	91	89.587	ENSPMEG00000008099	sympk	100	84.189	Poecilia_mexicana
ENSKMAG00000016292	sympk	91	89.158	ENSPREG00000006176	sympk	100	85.169	Poecilia_reticulata
ENSKMAG00000016292	sympk	89	75.023	ENSPPYG00000010135	SYMPK	97	74.817	Pongo_abelii
ENSKMAG00000016292	sympk	83	77.232	ENSPCAG00000005182	SYMPK	79	77.232	Procavia_capensis
ENSKMAG00000016292	sympk	94	72.539	ENSPCOG00000023740	SYMPK	98	75.142	Propithecus_coquereli
ENSKMAG00000016292	sympk	90	73.747	ENSPVAG00000001355	SYMPK	88	73.679	Pteropus_vampyrus
ENSKMAG00000016292	sympk	93	89.835	ENSPNYG00000011455	sympk	100	85.900	Pundamilia_nyererei
ENSKMAG00000016292	sympk	97	79.750	ENSPNAG00000016505	sympk	97	78.396	Pygocentrus_nattereri
ENSKMAG00000016292	sympk	99	69.910	ENSRNOG00000014353	Sympk	85	74.771	Rattus_norvegicus
ENSKMAG00000016292	sympk	97	71.429	ENSRBIG00000040963	SYMPK	98	75.477	Rhinopithecus_bieti
ENSKMAG00000016292	sympk	90	75.228	ENSRROG00000024834	SYMPK	95	75.369	Rhinopithecus_roxellana
ENSKMAG00000016292	sympk	90	75.137	ENSSBOG00000034497	SYMPK	95	73.800	Saimiri_boliviensis_boliviensis
ENSKMAG00000016292	sympk	93	72.568	ENSSHAG00000003139	SYMPK	95	74.702	Sarcophilus_harrisii
ENSKMAG00000016292	sympk	89	84.475	ENSSFOG00015006974	sympk	88	84.384	Scleropages_formosus
ENSKMAG00000016292	sympk	96	87.819	ENSSMAG00000018130	sympk	81	85.679	Scophthalmus_maximus
ENSKMAG00000016292	sympk	99	87.398	ENSSDUG00000007092	sympk	100	87.234	Seriola_dumerili
ENSKMAG00000016292	sympk	99	87.480	ENSSLDG00000014774	sympk	100	87.398	Seriola_lalandi_dorsalis
ENSKMAG00000016292	sympk	57	84.615	ENSSARG00000004274	-	58	84.615	Sorex_araneus
ENSKMAG00000016292	sympk	90	74.887	ENSSPUG00000002789	SYMPK	83	75.252	Sphenodon_punctatus
ENSKMAG00000016292	sympk	99	87.572	ENSSPAG00000000854	sympk	100	88.471	Stegastes_partitus
ENSKMAG00000016292	sympk	90	74.932	ENSSSCG00000003093	SYMPK	86	74.863	Sus_scrofa
ENSKMAG00000016292	sympk	99	82.382	ENSTRUG00000010202	sympk	100	81.316	Takifugu_rubripes
ENSKMAG00000016292	sympk	94	84.541	ENSTNIG00000017855	sympk	97	87.776	Tetraodon_nigroviridis
ENSKMAG00000016292	sympk	79	86.928	ENSTBEG00000000454	SYMPK	76	86.928	Tupaia_belangeri
ENSKMAG00000016292	sympk	90	67.092	ENSTTRG00000014311	SYMPK	86	67.092	Tursiops_truncatus
ENSKMAG00000016292	sympk	94	70.959	ENSUAMG00000022272	SYMPK	93	73.866	Ursus_americanus
ENSKMAG00000016292	sympk	90	75.296	ENSUMAG00000023698	SYMPK	86	75.296	Ursus_maritimus
ENSKMAG00000016292	sympk	90	75.114	ENSVVUG00000003024	SYMPK	95	75.114	Vulpes_vulpes
ENSKMAG00000016292	sympk	91	68.402	ENSXETG00000024453	sympk	90	68.761	Xenopus_tropicalis
ENSKMAG00000016292	sympk	88	89.362	ENSXCOG00000015368	sympk	100	89.269	Xiphophorus_couchianus
ENSKMAG00000016292	sympk	91	89.856	ENSXMAG00000005737	sympk	99	85.644	Xiphophorus_maculatus