EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSKMAG00000016377 (Gene tree)
Gene ID: 108236189
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC108236189
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Plus strand
Length: 11471 bases
Position: chrLWHD01000038.1:2622336-2633806
Accession: 108236189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022035	tRNA-synt_2	PF00152.20	2.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022321	-	5866	XM_017416682	ENSKMAP00000022035	1578 (aa)	XP_017272171	UPI0007F8B827

Gene Model

Click here to download ENSKMAG00000016377's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016377	si:ch211-256m1.8	100	78.585	ENSAPOG00000007012	si:ch211-256m1.8	100	78.585	Acanthochromis_polyacanthus
ENSKMAG00000016377	si:ch211-256m1.8	100	78.711	ENSAOCG00000012258	si:ch211-256m1.8	100	78.711	Amphiprion_ocellaris
ENSKMAG00000016377	si:ch211-256m1.8	100	78.711	ENSAPEG00000002724	si:ch211-256m1.8	100	78.711	Amphiprion_percula
ENSKMAG00000016377	si:ch211-256m1.8	100	79.343	ENSATEG00000006278	si:ch211-256m1.8	100	79.343	Anabas_testudineus
ENSKMAG00000016377	si:ch211-256m1.8	100	78.585	ENSACLG00000011503	si:ch211-256m1.8	100	78.585	Astatotilapia_calliptera
ENSKMAG00000016377	si:ch211-256m1.8	100	67.544	ENSAMXG00000038245	si:ch211-256m1.8	100	67.544	Astyanax_mexicanus
ENSKMAG00000016377	si:ch211-256m1.8	100	73.468	ENSCSEG00000006255	si:ch211-256m1.8	100	73.468	Cynoglossus_semilaevis
ENSKMAG00000016377	si:ch211-256m1.8	100	79.037	ENSCVAG00000003376	si:ch211-256m1.8	100	79.037	Cyprinodon_variegatus
ENSKMAG00000016377	si:ch211-256m1.8	100	66.540	ENSDARG00000055172	si:ch211-256m1.8	100	66.667	Danio_rerio
ENSKMAG00000016377	si:ch211-256m1.8	100	70.356	ENSELUG00000010546	si:ch211-256m1.8	100	70.356	Esox_lucius
ENSKMAG00000016377	si:ch211-256m1.8	100	78.594	ENSFHEG00000005847	si:ch211-256m1.8	100	78.594	Fundulus_heteroclitus
ENSKMAG00000016377	si:ch211-256m1.8	100	81.001	ENSGAFG00000010269	si:ch211-256m1.8	100	81.001	Gambusia_affinis
ENSKMAG00000016377	si:ch211-256m1.8	100	78.774	ENSHBUG00000014407	si:ch211-256m1.8	100	78.774	Haplochromis_burtoni
ENSKMAG00000016377	si:ch211-256m1.8	100	71.727	ENSHCOG00000006884	si:ch211-256m1.8	100	71.727	Hippocampus_comes
ENSKMAG00000016377	si:ch211-256m1.8	100	65.890	ENSIPUG00000022659	si:ch211-256m1.8	100	65.890	Ictalurus_punctatus
ENSKMAG00000016377	si:ch211-256m1.8	100	78.774	ENSLBEG00000010639	si:ch211-256m1.8	100	78.774	Labrus_bergylta
ENSKMAG00000016377	si:ch211-256m1.8	100	60.300	ENSLOCG00000011127	si:ch211-256m1.8	100	60.300	Lepisosteus_oculatus
ENSKMAG00000016377	si:ch211-256m1.8	99	78.228	ENSMAMG00000005651	si:ch211-256m1.8	99	78.228	Mastacembelus_armatus
ENSKMAG00000016377	si:ch211-256m1.8	100	78.648	ENSMZEG00005006924	si:ch211-256m1.8	100	78.648	Maylandia_zebra
ENSKMAG00000016377	si:ch211-256m1.8	100	73.770	ENSMMOG00000001736	si:ch211-256m1.8	100	73.770	Mola_mola
ENSKMAG00000016377	si:ch211-256m1.8	100	78.648	ENSNBRG00000005143	si:ch211-256m1.8	100	78.648	Neolamprologus_brichardi
ENSKMAG00000016377	si:ch211-256m1.8	100	77.342	ENSORLG00000022248	si:ch211-256m1.8	100	77.342	Oryzias_latipes
ENSKMAG00000016377	si:ch211-256m1.8	100	77.152	ENSORLG00020000214	si:ch211-256m1.8	100	77.152	Oryzias_latipes_hni
ENSKMAG00000016377	si:ch211-256m1.8	100	77.074	ENSORLG00015020297	si:ch211-256m1.8	100	77.112	Oryzias_latipes_hsok
ENSKMAG00000016377	si:ch211-256m1.8	100	78.214	ENSOMEG00000004519	si:ch211-256m1.8	100	78.339	Oryzias_melastigma
ENSKMAG00000016377	si:ch211-256m1.8	95	66.639	ENSPKIG00000007399	si:ch211-256m1.8	99	66.639	Paramormyrops_kingsleyae
ENSKMAG00000016377	si:ch211-256m1.8	100	66.120	ENSPMGG00000007698	si:ch211-256m1.8	100	66.120	Periophthalmus_magnuspinnatus
ENSKMAG00000016377	si:ch211-256m1.8	100	80.937	ENSPFOG00000005178	si:ch211-256m1.8	100	80.937	Poecilia_formosa
ENSKMAG00000016377	si:ch211-256m1.8	100	80.811	ENSPLAG00000006872	si:ch211-256m1.8	100	80.811	Poecilia_latipinna
ENSKMAG00000016377	si:ch211-256m1.8	100	80.684	ENSPMEG00000021815	si:ch211-256m1.8	100	80.684	Poecilia_mexicana
ENSKMAG00000016377	si:ch211-256m1.8	100	80.557	ENSPREG00000018669	si:ch211-256m1.8	100	80.557	Poecilia_reticulata
ENSKMAG00000016377	si:ch211-256m1.8	100	78.648	ENSPNYG00000018038	si:ch211-256m1.8	100	78.648	Pundamilia_nyererei
ENSKMAG00000016377	si:ch211-256m1.8	99	68.193	ENSPNAG00000003552	si:ch211-256m1.8	99	68.405	Pygocentrus_nattereri
ENSKMAG00000016377	si:ch211-256m1.8	99	67.483	ENSPNAG00000018965	-	99	67.483	Pygocentrus_nattereri
ENSKMAG00000016377	si:ch211-256m1.8	100	64.547	ENSSFOG00015008344	si:ch211-256m1.8	100	64.547	Scleropages_formosus
ENSKMAG00000016377	si:ch211-256m1.8	100	77.132	ENSSMAG00000007562	si:ch211-256m1.8	100	77.132	Scophthalmus_maximus
ENSKMAG00000016377	si:ch211-256m1.8	100	80.747	ENSSDUG00000018180	si:ch211-256m1.8	100	80.747	Seriola_dumerili
ENSKMAG00000016377	si:ch211-256m1.8	100	80.684	ENSSLDG00000020310	si:ch211-256m1.8	100	80.684	Seriola_lalandi_dorsalis
ENSKMAG00000016377	si:ch211-256m1.8	100	78.648	ENSSPAG00000013419	si:ch211-256m1.8	100	78.648	Stegastes_partitus
ENSKMAG00000016377	si:ch211-256m1.8	100	68.963	ENSTRUG00000023803	si:ch211-256m1.8	100	68.963	Takifugu_rubripes
ENSKMAG00000016377	si:ch211-256m1.8	100	81.317	ENSXCOG00000017726	si:ch211-256m1.8	100	81.317	Xiphophorus_couchianus
ENSKMAG00000016377	si:ch211-256m1.8	100	81.254	ENSXMAG00000026576	si:ch211-256m1.8	100	81.254	Xiphophorus_maculatus