EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSKMAG00000016379 (Gene tree)
Gene ID: 108248915
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC4
Gene Type: protein_coding
Species: Kryptolebias_marmoratus
Status: putative
Strand: Minus strand
Length: 177 bases
Position: chrLWHD01000392.1:220018-220194
Accession: 108248915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSKMAP00000022040	DNA_RNApol_7kD	PF03604.13	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSKMAT00000022326	-	177	XM_017437966	ENSKMAP00000022040	58 (aa)	XP_017293455	UPI00022B201A

Gene Model

Click here to download ENSKMAG00000016379's gene model file

Pathways

Pathway ID	Pathway Name	Source
kmr03020	RNA polymerase	KEGG
kmr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSKMAG00000016379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSKMAG00000016379	-	100	100.000	ENSKMAG00000007731	polr2k	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSKMAG00000016379	-	100	96.552	ENSG00000147669	POLR2K	100	96.552	Homo_sapiens
ENSKMAG00000016379	-	100	96.552	ENSAMEG00000000452	POLR2K	100	96.552	Ailuropoda_melanoleuca
ENSKMAG00000016379	-	100	98.276	ENSAPEG00000010759	polr2k	100	98.276	Amphiprion_percula
ENSKMAG00000016379	-	100	98.276	ENSATEG00000013218	polr2k	100	98.276	Anabas_testudineus
ENSKMAG00000016379	-	100	93.103	ENSACAG00000020961	POLR2K	100	93.103	Anolis_carolinensis
ENSKMAG00000016379	-	100	96.552	ENSANAG00000031482	-	100	96.552	Aotus_nancymaae
ENSKMAG00000016379	-	98	91.228	ENSANAG00000030159	-	100	91.228	Aotus_nancymaae
ENSKMAG00000016379	-	100	71.667	ENSAMXG00000038868	-	100	71.667	Astyanax_mexicanus
ENSKMAG00000016379	-	74	88.372	ENSBTAG00000052277	-	63	88.372	Bos_taurus
ENSKMAG00000016379	-	100	96.552	ENSBTAG00000022539	POLR2K	100	96.552	Bos_taurus
ENSKMAG00000016379	-	100	96.552	ENSCJAG00000022168	-	100	96.552	Callithrix_jacchus
ENSKMAG00000016379	-	100	96.552	ENSCJAG00000041308	-	82	96.552	Callithrix_jacchus
ENSKMAG00000016379	-	100	93.103	ENSCAFG00000032117	POLR2K	100	93.103	Canis_familiaris
ENSKMAG00000016379	-	100	96.552	ENSCAFG00020000296	-	100	96.552	Canis_lupus_dingo
ENSKMAG00000016379	-	100	93.103	ENSCAFG00020023694	-	100	93.103	Canis_lupus_dingo
ENSKMAG00000016379	-	100	87.500	ENSCAFG00020011172	-	100	87.500	Canis_lupus_dingo
ENSKMAG00000016379	-	100	94.828	ENSCHIG00000007790	-	100	94.828	Capra_hircus
ENSKMAG00000016379	-	100	96.552	ENSCHIG00000012813	POLR2K	100	96.552	Capra_hircus
ENSKMAG00000016379	-	98	92.982	ENSTSYG00000032761	-	100	92.982	Carlito_syrichta
ENSKMAG00000016379	-	100	93.103	ENSTSYG00000035576	-	100	93.103	Carlito_syrichta
ENSKMAG00000016379	-	83	93.750	ENSCAPG00000017627	POLR2K	100	93.750	Cavia_aperea
ENSKMAG00000016379	-	100	93.103	ENSCPOG00000036717	POLR2K	100	93.103	Cavia_porcellus
ENSKMAG00000016379	-	98	92.982	ENSCCAG00000002072	-	100	92.982	Cebus_capucinus
ENSKMAG00000016379	-	100	96.552	ENSCCAG00000019633	-	100	96.552	Cebus_capucinus
ENSKMAG00000016379	-	100	96.552	ENSCCAG00000004867	-	100	96.552	Cebus_capucinus
ENSKMAG00000016379	-	100	96.552	ENSCATG00000007143	POLR2K	100	96.552	Cercocebus_atys
ENSKMAG00000016379	-	100	94.828	ENSCLAG00000010033	POLR2K	100	94.828	Chinchilla_lanigera
ENSKMAG00000016379	-	100	96.552	ENSCSAG00000012163	POLR2K	100	96.552	Chlorocebus_sabaeus
ENSKMAG00000016379	-	88	92.157	ENSCHOG00000008820	-	100	92.157	Choloepus_hoffmanni
ENSKMAG00000016379	-	100	87.931	ENSCHOG00000000784	-	100	87.931	Choloepus_hoffmanni
ENSKMAG00000016379	-	100	96.552	ENSCHOG00000003599	POLR2K	100	96.552	Choloepus_hoffmanni
ENSKMAG00000016379	-	100	96.552	ENSCANG00000041713	POLR2K	100	96.552	Colobus_angolensis_palliatus
ENSKMAG00000016379	-	100	94.828	ENSCGRG00000011617	Polr2k	100	94.828	Cricetulus_griseus_crigri
ENSKMAG00000016379	-	100	96.552	ENSCSEG00000017377	polr2k	100	96.552	Cynoglossus_semilaevis
ENSKMAG00000016379	-	100	98.276	ENSCVAG00000022985	-	100	98.276	Cyprinodon_variegatus
ENSKMAG00000016379	-	100	98.276	ENSCVAG00000005198	polr2k	100	98.276	Cyprinodon_variegatus
ENSKMAG00000016379	-	100	96.552	ENSDARG00000075616	polr2k	100	96.552	Danio_rerio
ENSKMAG00000016379	-	100	96.552	ENSDNOG00000049353	-	100	96.552	Dasypus_novemcinctus
ENSKMAG00000016379	-	100	84.483	ENSDNOG00000038181	-	66	84.483	Dasypus_novemcinctus
ENSKMAG00000016379	-	100	94.828	ENSDNOG00000030774	-	100	94.828	Dasypus_novemcinctus
ENSKMAG00000016379	-	100	93.103	ENSDNOG00000047079	-	100	93.103	Dasypus_novemcinctus
ENSKMAG00000016379	-	100	94.828	ENSDORG00000028386	Polr2k	100	94.828	Dipodomys_ordii
ENSKMAG00000016379	-	81	82.979	FBgn0262954	Rpb12	82	82.979	Drosophila_melanogaster
ENSKMAG00000016379	-	86	72.000	ENSEASG00005016441	-	51	72.000	Equus_asinus_asinus
ENSKMAG00000016379	-	100	96.552	ENSEASG00005002840	-	100	96.552	Equus_asinus_asinus
ENSKMAG00000016379	-	98	80.702	ENSECAG00000029464	-	72	80.702	Equus_caballus
ENSKMAG00000016379	-	100	96.552	ENSECAG00000021345	POLR2K	100	96.552	Equus_caballus
ENSKMAG00000016379	-	88	88.235	ENSEEUG00000015727	POLR2K	100	88.235	Erinaceus_europaeus
ENSKMAG00000016379	-	100	96.552	ENSFALG00000005795	POLR2K	100	96.552	Ficedula_albicollis
ENSKMAG00000016379	-	88	86.275	ENSFDAG00000018794	-	100	86.275	Fukomys_damarensis
ENSKMAG00000016379	-	100	96.552	ENSFDAG00000000348	POLR2K	100	96.552	Fukomys_damarensis
ENSKMAG00000016379	-	98	68.421	ENSFHEG00000019707	-	93	68.421	Fundulus_heteroclitus
ENSKMAG00000016379	-	100	98.276	ENSGAFG00000010349	polr2k	100	98.276	Gambusia_affinis
ENSKMAG00000016379	-	100	96.552	ENSGAGG00000009919	POLR2K	100	96.552	Gopherus_agassizii
ENSKMAG00000016379	-	91	81.132	ENSGGOG00000015089	-	96	81.132	Gorilla_gorilla
ENSKMAG00000016379	-	100	96.552	ENSGGOG00000024539	POLR2K	100	96.552	Gorilla_gorilla
ENSKMAG00000016379	-	100	100.000	ENSHBUG00000002269	polr2k	100	100.000	Haplochromis_burtoni
ENSKMAG00000016379	-	100	91.379	ENSHGLG00000021192	-	100	91.379	Heterocephalus_glaber_female
ENSKMAG00000016379	-	100	96.552	ENSHGLG00000004285	POLR2K	100	96.552	Heterocephalus_glaber_female
ENSKMAG00000016379	-	100	96.552	ENSHGLG00100005467	POLR2K	100	96.552	Heterocephalus_glaber_male
ENSKMAG00000016379	-	100	86.207	ENSHCOG00000016287	polr2k	100	86.207	Hippocampus_comes
ENSKMAG00000016379	-	81	93.617	ENSSTOG00000032566	-	96	93.617	Ictidomys_tridecemlineatus
ENSKMAG00000016379	-	100	96.552	ENSSTOG00000006123	-	100	96.552	Ictidomys_tridecemlineatus
ENSKMAG00000016379	-	95	85.455	ENSJJAG00000000698	-	95	85.455	Jaculus_jaculus
ENSKMAG00000016379	-	97	82.143	ENSJJAG00000016100	-	88	82.143	Jaculus_jaculus
ENSKMAG00000016379	-	98	82.456	ENSJJAG00000012986	-	98	82.456	Jaculus_jaculus
ENSKMAG00000016379	-	100	94.828	ENSJJAG00000000271	-	100	94.828	Jaculus_jaculus
ENSKMAG00000016379	-	100	94.828	ENSJJAG00000014209	-	100	94.828	Jaculus_jaculus
ENSKMAG00000016379	-	100	94.828	ENSLBEG00000027114	polr2k	100	94.828	Labrus_bergylta
ENSKMAG00000016379	-	100	94.915	ENSLACG00000015753	POLR2K	100	94.915	Latimeria_chalumnae
ENSKMAG00000016379	-	100	98.276	ENSLOCG00000009730	polr2k	100	98.276	Lepisosteus_oculatus
ENSKMAG00000016379	-	98	91.228	ENSLAFG00000005254	-	100	91.228	Loxodonta_africana
ENSKMAG00000016379	-	98	65.217	ENSMFAG00000039166	-	100	68.116	Macaca_fascicularis
ENSKMAG00000016379	-	100	96.552	ENSMFAG00000030863	-	100	96.552	Macaca_fascicularis
ENSKMAG00000016379	-	98	85.965	ENSMMUG00000040264	-	100	85.965	Macaca_mulatta
ENSKMAG00000016379	-	100	96.552	ENSMMUG00000020714	-	100	96.552	Macaca_mulatta
ENSKMAG00000016379	-	100	96.552	ENSMNEG00000023503	-	100	96.552	Macaca_nemestrina
ENSKMAG00000016379	-	98	63.768	ENSMNEG00000033552	-	100	68.116	Macaca_nemestrina
ENSKMAG00000016379	-	93	81.481	ENSMLEG00000012572	-	79	81.481	Mandrillus_leucophaeus
ENSKMAG00000016379	-	100	96.552	ENSMLEG00000038200	POLR2K	100	96.552	Mandrillus_leucophaeus
ENSKMAG00000016379	-	100	100.000	ENSMAMG00000014290	polr2k	100	100.000	Mastacembelus_armatus
ENSKMAG00000016379	-	100	100.000	ENSMZEG00005003220	polr2k	100	100.000	Maylandia_zebra
ENSKMAG00000016379	-	100	96.552	ENSMAUG00000010288	Polr2k	100	96.552	Mesocricetus_auratus
ENSKMAG00000016379	-	100	96.552	ENSMICG00000044624	POLR2K	100	96.552	Microcebus_murinus
ENSKMAG00000016379	-	100	96.552	ENSMOCG00000009880	Polr2k	100	96.552	Microtus_ochrogaster
ENSKMAG00000016379	-	100	98.276	ENSMMOG00000017945	polr2k	100	98.276	Mola_mola
ENSKMAG00000016379	-	100	94.828	ENSMODG00000006312	POLR2K	100	94.828	Monodelphis_domestica
ENSKMAG00000016379	-	100	94.828	MGP_CAROLIEiJ_G0019735	Polr2k	100	94.828	Mus_caroli
ENSKMAG00000016379	-	100	94.828	ENSMUSG00000045996	Polr2k	100	94.828	Mus_musculus
ENSKMAG00000016379	-	100	94.828	MGP_PahariEiJ_G0019744	-	100	94.828	Mus_pahari
ENSKMAG00000016379	-	100	93.103	MGP_SPRETEiJ_G0020631	Polr2k	100	93.103	Mus_spretus
ENSKMAG00000016379	-	98	87.719	ENSMLUG00000029803	-	100	87.719	Myotis_lucifugus
ENSKMAG00000016379	-	100	94.828	ENSMLUG00000030053	-	100	94.828	Myotis_lucifugus
ENSKMAG00000016379	-	100	96.552	ENSNGAG00000020950	Polr2k	100	96.552	Nannospalax_galili
ENSKMAG00000016379	-	100	100.000	ENSNBRG00000013533	polr2k	100	100.000	Neolamprologus_brichardi
ENSKMAG00000016379	-	91	92.453	ENSNLEG00000031897	-	69	92.453	Nomascus_leucogenys
ENSKMAG00000016379	-	91	81.132	ENSNLEG00000018544	-	96	81.132	Nomascus_leucogenys
ENSKMAG00000016379	-	100	96.552	ENSMEUG00000000401	POLR2K	100	96.552	Notamacropus_eugenii
ENSKMAG00000016379	-	100	86.207	ENSOPRG00000005504	-	100	86.207	Ochotona_princeps
ENSKMAG00000016379	-	100	84.483	ENSOPRG00000015675	-	100	84.483	Ochotona_princeps
ENSKMAG00000016379	-	100	96.552	ENSOPRG00000009562	-	100	96.552	Ochotona_princeps
ENSKMAG00000016379	-	100	79.310	ENSOPRG00000010172	-	100	79.310	Ochotona_princeps
ENSKMAG00000016379	-	100	94.828	ENSODEG00000019784	-	100	94.828	Octodon_degus
ENSKMAG00000016379	-	98	91.228	ENSODEG00000019324	-	98	91.228	Octodon_degus
ENSKMAG00000016379	-	100	94.828	ENSODEG00000004358	-	100	94.828	Octodon_degus
ENSKMAG00000016379	-	100	93.103	ENSODEG00000018618	-	100	93.103	Octodon_degus
ENSKMAG00000016379	-	100	91.379	ENSODEG00000020322	-	100	91.379	Octodon_degus
ENSKMAG00000016379	-	100	86.207	ENSODEG00000020129	-	100	86.207	Octodon_degus
ENSKMAG00000016379	-	100	94.828	ENSOCUG00000029376	-	100	94.828	Oryctolagus_cuniculus
ENSKMAG00000016379	-	100	93.103	ENSOCUG00000016854	-	100	93.103	Oryctolagus_cuniculus
ENSKMAG00000016379	-	100	98.276	ENSORLG00015010501	polr2k	100	98.276	Oryzias_latipes_hsok
ENSKMAG00000016379	-	100	96.552	ENSOARG00000001480	POLR2K	100	96.552	Ovis_aries
ENSKMAG00000016379	-	100	96.552	ENSPPAG00000040441	POLR2K	100	96.552	Pan_paniscus
ENSKMAG00000016379	-	100	96.552	ENSPTRG00000020470	POLR2K	100	96.552	Pan_troglodytes
ENSKMAG00000016379	-	100	96.552	ENSPANG00000011129	-	100	96.552	Papio_anubis
ENSKMAG00000016379	-	100	96.552	ENSPSIG00000004097	POLR2K	100	96.552	Pelodiscus_sinensis
ENSKMAG00000016379	-	100	98.276	ENSPMGG00000022982	polr2k	100	98.276	Periophthalmus_magnuspinnatus
ENSKMAG00000016379	-	100	82.759	ENSPEMG00000001038	-	72	82.759	Peromyscus_maniculatus_bairdii
ENSKMAG00000016379	-	100	89.655	ENSPEMG00000008788	-	100	89.655	Peromyscus_maniculatus_bairdii
ENSKMAG00000016379	-	100	96.552	ENSPEMG00000012015	-	100	96.552	Peromyscus_maniculatus_bairdii
ENSKMAG00000016379	-	100	98.276	ENSPMEG00000022211	polr2k	100	98.276	Poecilia_mexicana
ENSKMAG00000016379	-	100	96.552	ENSPPYG00000018786	POLR2K	100	96.552	Pongo_abelii
ENSKMAG00000016379	-	100	94.828	ENSPCAG00000000746	POLR2K	100	94.828	Procavia_capensis
ENSKMAG00000016379	-	100	94.828	ENSPCOG00000026981	-	100	94.828	Propithecus_coquereli
ENSKMAG00000016379	-	100	93.103	ENSPCOG00000007173	-	100	93.103	Propithecus_coquereli
ENSKMAG00000016379	-	100	96.552	ENSPVAG00000009991	POLR2K	100	96.552	Pteropus_vampyrus
ENSKMAG00000016379	-	100	100.000	ENSPNYG00000012241	polr2k	100	100.000	Pundamilia_nyererei
ENSKMAG00000016379	-	100	96.552	ENSRNOG00000010408	Polr2k	100	96.552	Rattus_norvegicus
ENSKMAG00000016379	-	98	80.702	ENSRBIG00000032617	-	80	80.702	Rhinopithecus_bieti
ENSKMAG00000016379	-	100	96.552	ENSRBIG00000035082	POLR2K	100	96.552	Rhinopithecus_bieti
ENSKMAG00000016379	-	98	80.702	ENSRROG00000036861	-	80	80.702	Rhinopithecus_roxellana
ENSKMAG00000016379	-	100	96.552	ENSRROG00000043844	-	100	96.552	Rhinopithecus_roxellana
ENSKMAG00000016379	-	100	94.828	ENSSBOG00000019574	-	100	94.828	Saimiri_boliviensis_boliviensis
ENSKMAG00000016379	-	100	74.138	ENSSBOG00000028601	-	100	74.138	Saimiri_boliviensis_boliviensis
ENSKMAG00000016379	-	100	96.552	ENSSBOG00000010968	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSKMAG00000016379	-	100	96.552	ENSSHAG00000006381	POLR2K	100	96.552	Sarcophilus_harrisii
ENSKMAG00000016379	-	100	98.276	ENSSFOG00015002881	polr2k	100	98.276	Scleropages_formosus
ENSKMAG00000016379	-	100	96.552	ENSSMAG00000007196	polr2k	100	96.552	Scophthalmus_maximus
ENSKMAG00000016379	-	100	100.000	ENSSLDG00000013975	polr2k	100	100.000	Seriola_lalandi_dorsalis
ENSKMAG00000016379	-	88	96.078	ENSSARG00000001557	POLR2K	100	96.078	Sorex_araneus
ENSKMAG00000016379	-	100	98.276	ENSSPUG00000018205	POLR2K	100	98.276	Sphenodon_punctatus
ENSKMAG00000016379	-	100	89.655	ENSSSCG00000037160	-	100	89.655	Sus_scrofa
ENSKMAG00000016379	-	100	96.552	ENSSSCG00000021180	POLR2K	100	96.552	Sus_scrofa
ENSKMAG00000016379	-	84	93.878	ENSSSCG00000036795	-	100	93.878	Sus_scrofa
ENSKMAG00000016379	-	100	96.552	ENSTGUG00000012051	-	100	96.552	Taeniopygia_guttata
ENSKMAG00000016379	-	100	96.552	ENSTGUG00000018366	-	100	96.552	Taeniopygia_guttata
ENSKMAG00000016379	-	98	85.965	ENSTBEG00000003799	-	98	85.965	Tupaia_belangeri
ENSKMAG00000016379	-	100	96.552	ENSTBEG00000010260	-	100	96.552	Tupaia_belangeri
ENSKMAG00000016379	-	100	96.552	ENSTTRG00000007489	POLR2K	100	96.552	Tursiops_truncatus
ENSKMAG00000016379	-	95	70.909	ENSUAMG00000008073	-	77	70.909	Ursus_americanus
ENSKMAG00000016379	-	100	96.552	ENSUMAG00000017508	-	100	96.552	Ursus_maritimus
ENSKMAG00000016379	-	95	70.909	ENSUMAG00000021763	-	77	70.909	Ursus_maritimus
ENSKMAG00000016379	-	100	96.552	ENSVPAG00000009630	POLR2K	100	96.552	Vicugna_pacos
ENSKMAG00000016379	-	100	93.103	ENSXETG00000025929	polr2k	100	93.103	Xenopus_tropicalis